Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001430-TA|BGIBMGA001430-PA|undefined
(840 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43455| Best HMM Match : No HMM Matches (HMM E-Value=.) 244 3e-64
SB_15509| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.24
SB_45658| Best HMM Match : Sushi (HMM E-Value=0) 33 0.72
SB_2546| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.72
SB_23882| Best HMM Match : Cyt-b5 (HMM E-Value=9.2e-19) 33 0.95
SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.8
SB_23380| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 5.1
SB_9098| Best HMM Match : Rho_RNA_bind (HMM E-Value=8.9) 31 5.1
SB_57704| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 5.1
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 5.1
SB_51224| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.7
SB_42200| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.7
SB_45371| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.7
SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 8.9
SB_2329| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 8.9
SB_58300| Best HMM Match : AAA_5 (HMM E-Value=0) 30 8.9
SB_22633| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 8.9
SB_8673| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-38) 30 8.9
>SB_43455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 924
Score = 244 bits (596), Expect = 3e-64
Identities = 108/182 (59%), Positives = 145/182 (79%), Gaps = 11/182 (6%)
Query: 129 QVRFGHHKKYQEWFQRQYLATPESQSLRSDMIRFIVGVIHPTNELLCSDIIPRWAVIGWL 188
QV+FG K+YQ+WF R YL++PES+SL D+IRFIVGV+HP+NE+LCSDIIPRWA+IGWL
Sbjct: 37 QVKFGQQKRYQDWFHRMYLSSPESRSLIPDLIRFIVGVVHPSNEVLCSDIIPRWAIIGWL 96
Query: 189 LTTCTSNVAASNAKLALFYDWLFYDPEKDNIMNIEPAILVMHHSMRSHPAVTATLLDFLC 248
LT+C + VA++N+KLALFYDWLFY P+KDNIMNIEPAIL+MHHS++SHPA+T TLLDF+C
Sbjct: 97 LTSCQTAVASANSKLALFYDWLFYQPDKDNIMNIEPAILLMHHSIKSHPAITKTLLDFIC 156
Query: 249 RIIPNFYPPYAEKVRQGIFNSLQQIIEKRVLPNLHPLFDSQKLDRELRSTVRETFKEFCT 308
R +VRQG+ N + I +K+V+ +L P+ D+ K++R+L+ VR+ EF
Sbjct: 157 R-----------EVRQGVRNGFRTIQKKKVVMSLSPVLDNPKMERDLKILVRKELSEFLN 205
Query: 309 NG 310
+G
Sbjct: 206 SG 207
Score = 148 bits (358), Expect = 2e-35
Identities = 86/295 (29%), Positives = 155/295 (52%), Gaps = 24/295 (8%)
Query: 537 ERCQEYDTNVLVWLIPDVYREFKDQAQNHIRLLHAIVSTLDACQLQRLICLTLQGNLMMF 596
E CQEYD +LIP +YR+F + +LH +V ++ QL IC G L++F
Sbjct: 512 EVCQEYDPRAFRFLIPSIYRKFSEHVVGDSEVLHMLVCNMEPRQLNEFICEITMGELVIF 571
Query: 597 KSDDITTMLSTSLGWETFEQYCLWQLLTAHDISVEDVLPIIPKLSFKEHSEALTSVLLML 656
+ + +++ ++L WE+FEQYC+WQL+ A D+ +E ++ I+P+L ++H+EAL ++L+++
Sbjct: 572 GEEQLDSLIESTLDWESFEQYCVWQLIQAEDVLLESIVSILPQLHPEKHAEALANLLIIM 631
Query: 657 KQERPTADV---VRQLFCRTYDEEDTSVVSTLMYWCQDYEDKVGDLVAALLSTRYPGTSP 713
K P+ D+ V ++ C + + L YW Q++ + LV+ + + G
Sbjct: 632 KSVPPSVDLLTPVLEMDCSDKRPGNQFTCALLKYWSQEHARDLAQLVSQHVCKQLSG--- 688
Query: 714 NKRKRPGKHSMPPNAPPSAELVLKHLE---QMRMCCVEQDDM---SIFNMECMQKALQQA 767
K+++ K+ PS E VL HL + V D+ ++F E + KAL+Q
Sbjct: 689 GKKRKSSKNQ------PSVEQVLTHLNWLYKRYFFVVVHADLQYFAVFKQESLVKALEQV 742
Query: 768 QSNSSDSLRRQYSELFSLAWEDELPISRRARKLVSNSMPINANLHSSNEDSEEEE 822
+ + ++ + ++ LFS+ E E +RK + + AN SS S+E +
Sbjct: 743 RVAAPEARKNRFKMLFSICDEKE------SRKRTTRMSRVTANRPSSPASSDESD 791
>SB_15509| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 35.1 bits (77), Expect = 0.24
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 298 TVRETFKEFCTNGNG-EGVSGIRDEGTDDAIPRVGSDEPAFSDDEEE-TITPTIAEDTDD 355
T R K+ +G G S RD TDD VG D+ ++ D++ + +P I ++DD
Sbjct: 126 TPRTNSKDSLISGPGTSNESDTRDSATDDVTLEVGVDDGSYVDEKGALSDSPWIESESDD 185
Query: 356 DD 357
DD
Sbjct: 186 DD 187
>SB_45658| Best HMM Match : Sushi (HMM E-Value=0)
Length = 875
Score = 33.5 bits (73), Expect = 0.72
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 2/113 (1%)
Query: 723 SMPPNAPPSAELVLKHLEQMRMCCVEQDDMSIFNMECMQKALQQAQSNSSDSLRR-QYSE 781
S APP ELV+ + +D + I QK +Q +++SD+L QYS
Sbjct: 453 SQVERAPPPFELVISEVTNNNPTAEIRDMLLIAQWWQAQKRMQTEPASTSDALENMQYST 512
Query: 782 LFSLAWEDELPISRRARKLVSNSMPINANLHSSNEDSEEEEIVKPKQAKRRKK 834
+ E IS ++ +S+ M ++ D ++++ P ++ KK
Sbjct: 513 PSQVVLEG-AGISEQSESFLSSEMAGDSMKRPLESDEDDDDGASPVSDQKPKK 564
>SB_2546| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 33.5 bits (73), Expect = 0.72
Identities = 12/40 (30%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 318 IRDEGTDDAIPRVGSDEPAFSDDEEETITPTIAEDTDDDD 357
++D+G DDA+ D+ +DD+++ + + +D +DDD
Sbjct: 235 VKDDGDDDAVDDDDGDD-VVNDDDDDDVVNVVDDDNNDDD 273
>SB_23882| Best HMM Match : Cyt-b5 (HMM E-Value=9.2e-19)
Length = 167
Score = 33.1 bits (72), Expect = 0.95
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 305 EFCTNGNGEGVSGIRDEGTDDAIPRVGSDEPAFSDDEEETITPTIAEDTDDDD 357
E NG+ +G D+G DD + G D+ DD+ + +D DDDD
Sbjct: 88 ELSCNGDDDGGGNNDDDGVDDGVGGGGGDDSG-GDDDGGGVGDDDDDDDDDDD 139
>SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 31.1 bits (67), Expect = 3.8
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Query: 748 EQDDMSIFNMECMQKALQQAQSNSSDSLRRQYSELFSLAWEDELPISRRARKLVSNSMPI 807
++D F++E + L++ S+S D SE L L ++ R+ +N +
Sbjct: 331 DEDVNEEFDLEKYIRKLERGTSSSEDDASSVTSE--KLINRAVLRATKNFRR--ANVDTV 386
Query: 808 NANLHSSNEDSEEEEIVKPKQAKRRKKAISDSD 840
N S + DSE E KPK+ K KK S S+
Sbjct: 387 KQNSDSESSDSEPEVEPKPKKEKPPKKEQSGSE 419
>SB_23380| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 544
Score = 30.7 bits (66), Expect = 5.1
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 760 MQKALQQAQSNSSDSLRRQYSELFSLAWEDELPISRRA--RKLVSNSMPINANLHSSNED 817
M ++ +Q Q SD++ E F WED LP S A +LV + + N L++ D
Sbjct: 1 MLRSPEQLQKQLSDAISVIGMEDFPDKWEDLLPESEEAGSLELVKSQICDNVGLYAQKYD 60
Query: 818 SEEEEIVKPK 827
EE E PK
Sbjct: 61 -EEFETYLPK 69
>SB_9098| Best HMM Match : Rho_RNA_bind (HMM E-Value=8.9)
Length = 208
Score = 30.7 bits (66), Expect = 5.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 309 NGNGEGVSGIRDEGTDDAIPRVGSDEPAFSDDEEETITPTIAEDTDDDD 357
+G+G+ G D+G DD G D DD+++ +D DDDD
Sbjct: 124 DGDGDDDGGGDDDGGDDDDDGGGDDGDDDDDDDDDDDDDDDDDDDDDDD 172
>SB_57704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 30.7 bits (66), Expect = 5.1
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 268 NSLQQIIEKRVLPNLHPLFDSQKLDRELRSTVRETFKEFCTNGNGEGVSGIRDEGTDDAI 327
NSL+ I V+P+ L K + K+ C N G+G D+G DD
Sbjct: 306 NSLKSFIVAVVVPDAEVLIPWAKTH-----DIEGDIKQLCQN-QGDGSDD--DDGDDDDD 357
Query: 328 PRVGSDEPAFSDDEEETITPTIAEDTDDDD 357
D+ DD+++ +D DDDD
Sbjct: 358 DDDDDDDDDNDDDDDDNDGDDDDDDNDDDD 387
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 30.7 bits (66), Expect = 5.1
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 90 SLSPTFTNVLQLLQTRTSRRYLQSRLTPDMERKL--VFLTSQVRFGHHKKYQEWFQR 144
SL TN+ + L T R LQS+ +ERK+ + L ++ H +Y+E ++
Sbjct: 1656 SLESKLTNMQEQLDLETKERALQSKANRKLERKIKELMLQNEEERRHSDQYREQMEK 1712
>SB_51224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 808
Score = 30.3 bits (65), Expect = 6.7
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 760 MQKALQQAQSNSSDSLRRQYSELFSLAWED---ELPISRRARKLVSNSMPINANLHSSNE 816
+QK Q +S++ + + L E E+ +SR +LVS+ + + +L ++
Sbjct: 575 LQKDFQSFHQRTSENSQSMQDRILKLEEERNSLEVEVSRLRSELVSSKLKADEDLMNAKT 634
Query: 817 DSEEEEIVKPKQAKRR 832
++EE+V+ +Q R
Sbjct: 635 KLKQEELVRSRQYDER 650
>SB_42200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 450
Score = 30.3 bits (65), Expect = 6.7
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 447 SMFNYLID--SSSGAEHKRKLVLETFKEIHSQGSLRCVGFSLLFYLRVCYERDRRSERDS 504
S N++ D S S A+ + + E+H+ L + YE R + ++S
Sbjct: 269 SRLNFVADQLSRSHADFNCRAQFNEYAELHNLFELEIPDDRSQQLIHYAYEVQRFAFQES 328
Query: 505 AKRRNVKFKADVYKDYCSYLEL 526
KR N++ + Y +CSY +L
Sbjct: 329 TKR-NMRSQLQAYIHFCSYYQL 349
>SB_45371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 30.3 bits (65), Expect = 6.7
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 809 ANLHSSNEDSEEEEIVKPKQAKRRKKAISDSD 840
+N S++DSE+E+ K K +K+RKK+ S +
Sbjct: 105 SNFTDSDDDSEDEKKKKKKTSKKRKKSSSKDE 136
>SB_49136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1459
Score = 29.9 bits (64), Expect = 8.9
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Query: 310 GNGEGVSGIRD-----EGTDDAIPRVGSDEPAFSDDEEETITPTIAEDTDD 355
G GE VS D EGTDD G ++ DD++E + +A D+ D
Sbjct: 407 GEGEEVSSGSDSSTDEEGTDDGDEEGGEEDDDDDDDDDENQSGILAPDSQD 457
>SB_2329| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1181
Score = 29.9 bits (64), Expect = 8.9
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 312 GEGVSGIRDEGTDDAIPRVGSDEPAFSDDE--EETITPTIAEDTDD 355
GE +RDEG +DA + S + SD+E ++T PT+ D
Sbjct: 1072 GEKRGTLRDEGEEDASDYLSSSSDSESDNESLDQTSVPTLVSSLKD 1117
>SB_58300| Best HMM Match : AAA_5 (HMM E-Value=0)
Length = 1736
Score = 29.9 bits (64), Expect = 8.9
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Query: 216 KDNIMNIEPAILVMHHSMRSHPAVTATLLDFLCRIIPNFYPPYAEKVRQGIFNSLQQIIE 275
KD + NI+P L S+R P V +L+ + R++ F + S++ +
Sbjct: 1474 KDAVGNIKPESLSEIRSLRMPPEVIRDILEAVLRLMGIFDTSWV---------SMKSFLA 1524
Query: 276 KRVLPNLHPLFDSQKLDRELRSTVRE 301
KR + + FD++K+ ++R++V E
Sbjct: 1525 KRGVKDEICSFDARKITPDIRASVEE 1550
>SB_22633| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 260
Score = 29.9 bits (64), Expect = 8.9
Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 787 WEDELPISRRARKLVSNSMPINANLHSSNED--SEEEEIVKPKQAKRRKKAISD 838
W DE R+ R+ ++ +NA++ + + +EEEE + ++A RRK+ + +
Sbjct: 189 WVDEEEEERKLRERREKTLRLNAHIWRAEAERKTEEEESAEKEKALRRKQELEE 242
>SB_8673| Best HMM Match : 7tm_1 (HMM E-Value=3.5e-38)
Length = 719
Score = 29.9 bits (64), Expect = 8.9
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 282 LHPLFDSQKLDRELRSTVRETFKEFCTNGNGEGVSGIRDEGTDDAIPRVGSDE 334
L+PL K+ R+LRS+V +T CT + + IR T D + V DE
Sbjct: 245 LNPLIYYWKM-RDLRSSVNQTVSLICTRRSLRQIHPIRSAWTVDQMGEVFGDE 296
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.320 0.134 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,074,757
Number of Sequences: 59808
Number of extensions: 1195539
Number of successful extensions: 4388
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 4327
Number of HSP's gapped (non-prelim): 65
length of query: 840
length of database: 16,821,457
effective HSP length: 88
effective length of query: 752
effective length of database: 11,558,353
effective search space: 8691881456
effective search space used: 8691881456
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 64 (29.9 bits)
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