Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001430-TA|BGIBMGA001430-PA|undefined
(840 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084161-2|AAK29732.3| 782|Caenorhabditis elegans Hypothetical ... 117 3e-26
AC084161-3|AAK29731.2| 249|Caenorhabditis elegans Hypothetical ... 70 6e-12
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 32 1.9
Z81502-3|CAB04104.1| 366|Caenorhabditis elegans Hypothetical pr... 31 2.6
AC091125-6|AAK27886.3| 474|Caenorhabditis elegans Hypothetical ... 31 4.5
AC025727-4|AAG23388.3| 463|Caenorhabditis elegans Hypothetical ... 31 4.5
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 31 4.5
Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical pr... 30 7.8
Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical pr... 30 7.8
AF043704-1|AAK21475.1| 487|Caenorhabditis elegans Hypothetical ... 30 7.8
>AC084161-2|AAK29732.3| 782|Caenorhabditis elegans Hypothetical
protein Y92H12A.4 protein.
Length = 782
Score = 117 bits (282), Expect = 3e-26
Identities = 89/339 (26%), Positives = 169/339 (49%), Gaps = 29/339 (8%)
Query: 39 RQKEVNFVITLIRERFTDVLSLGRDLVRLLQNVARIPEFNQLWQDILVNPKSLSPTFTNV 98
R+ +++ V +I+ R D L+LGRD + +L + ++P+ ++W+DI+ NP S V
Sbjct: 208 RESQLDLVQWVIKSRKIDCLTLGRDFILILIRLGKMPQIEEIWKDIVANPASF-----GV 262
Query: 99 LQLLQTRTSRRYLQS-RLTPDMERKLVFLTSQVRFGHH-KKYQEWFQRQYLATPESQSLR 156
L + T + LQ R++ ++ERK+ F+ V G + Y W ++ + +LR
Sbjct: 263 SNLEEYMTKQNVLQHVRISIELERKVQFMV--VNGGKNLLTYFTWLNNKFFRANDGPALR 320
Query: 157 SDMIRFIVGVIHPTNELLCSDIIPRWAVIGWLLTTCTSNVAASNAKLALFYDWLFYDPEK 216
++ +R+++ + + L + R ++ L++T S KL LF DW D +
Sbjct: 321 AECVRYVLSMNLDPAKALPNAQENRVQLLHLLISTVPSGPELQWLKLCLFADWFGCDDKN 380
Query: 217 D-NIMNIEPAILVMHHSM--------------RSHPAVTA-TLLDFLCRIIPNFYPP-YA 259
N+M +E + V+ +++ SH + A +LL+FLC+ + PP YA
Sbjct: 381 SANLMCVENSFSVVRYALFLTPTGPQQNSIVQGSHCSQFANSLLEFLCKSVDVLLPPAYA 440
Query: 260 EKVRQGIFNSLQQIIEKRVLPNLHPLFDSQKLDRELRSTVRETFKEFCTNGNG-EGVSGI 318
E +R+ + NS + I+ R+ NL + ++ K+DR++ +R F +F N G +
Sbjct: 441 EPIRRNV-NSAMRFIKDRLQHNLPQILENSKIDRKVSELLRNVFPDFVRNPIGNSSIIRP 499
Query: 319 RDEGTDDAIPRVGSDEPAFSDDEEETITPTIAEDTDDDD 357
+ + TD+ S EPA S +++ T P+ + + D
Sbjct: 500 KKKSTDEEKAIKSSSEPALS-EQKSTEKPSFSTEKLSSD 537
Score = 41.9 bits (94), Expect = 0.002
Identities = 19/71 (26%), Positives = 36/71 (50%)
Query: 515 DVYKDYCSYLELKLAESLADDFERCQEYDTNVLVWLIPDVYREFKDQAQNHIRLLHAIVS 574
+ YK+ + E LA D + C D + +L+P V+ +F+++ + LL + +
Sbjct: 707 ECYKNIAKMSGRSVDEMLASDLQLCAVNDNRLFAYLVPFVFSQFEEEVMSTPALLATLCA 766
Query: 575 TLDACQLQRLI 585
LDA QL+ +
Sbjct: 767 NLDAIQLRSFV 777
>AC084161-3|AAK29731.2| 249|Caenorhabditis elegans Hypothetical
protein Y92H12A.3 protein.
Length = 249
Score = 70.1 bits (164), Expect = 6e-12
Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 9/188 (4%)
Query: 604 MLSTSLGWETFEQYCLWQLLTAHDISVEDVLPIIPKLSFKEHSEALTSVLLMLKQ--ERP 661
M+ S+ W T Q+ W L+ A + +E L IPK H EA+ ++LLM+K+ P
Sbjct: 1 MVMDSVDWATTPQWVFWHLVHADGVPIEWFLSTIPKFDAVGHDEAIANILLMMKRMDREP 60
Query: 662 TADVVRQLFCRTYDEEDTSVVSTLMYWCQDYE--DKVGDLVAALLSTRYPGTSPNKRKRP 719
A ++R LF R +++DT + + +D E KV ++VA L+ + G +
Sbjct: 61 WAGLIRALFNRVPNKDDTFTIDAMKVLIEDSEQCQKVAEIVAQLIK-KLLGNNDIIGLGV 119
Query: 720 GKHSMPPNAPPSAELVLKHLEQMRMCCVEQDDM---SIFNMECMQKALQQAQSN-SSDSL 775
H + + VL+HL+ CVE+ + + +Q+A + N + L
Sbjct: 120 RVHKKGNPMKLTLQQVLEHLQHFSSTCVEKKQRMTETFMSRSHLQEAFASIKVNDKAVVL 179
Query: 776 RRQYSELF 783
++Y LF
Sbjct: 180 VKKYGNLF 187
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 25 RLVEDHNIPQLM-NLRQKEVNFVITLIRERFTDVLSLGRDL 64
RLV+DHN+ L+ + + + NF+I L E D + G+DL
Sbjct: 805 RLVKDHNVTVLVISTLEADKNFIINLSAENLYDSDNFGKDL 845
>Z81502-3|CAB04104.1| 366|Caenorhabditis elegans Hypothetical
protein F14B6.3 protein.
Length = 366
Score = 31.5 bits (68), Expect = 2.6
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 12/128 (9%)
Query: 243 LLDFLCRIIPNFYPPYAEKVRQGIFNSLQQIIE--KRVLPNLHPLFDSQKLDRELRST-- 298
L + L I NF E VR F+ Q++ + L N++ ++ L + ST
Sbjct: 119 LSEALNNCIENFDQLVDEVVRHKDFHERSQLLRVLEECLGNMNSFLQNENLTVDDISTGA 178
Query: 299 ---VRETFKEFCTNGNGEGVSGIRD--EGTDDAIPRVGSDE---PAFSDDEEETITPTIA 350
+ ET ++ + G+SG ++ EGT+ + + G E DD++E+
Sbjct: 179 CALLNETAEKLKQMFSSSGISGRKESSEGTNKDLIKFGELEIRGDEEEDDDDESYVEGEE 238
Query: 351 EDTDDDDL 358
ED+ D+DL
Sbjct: 239 EDSSDEDL 246
>AC091125-6|AAK27886.3| 474|Caenorhabditis elegans Hypothetical
protein Y67D2.2 protein.
Length = 474
Score = 30.7 bits (66), Expect = 4.5
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 5/44 (11%)
Query: 782 LFSLAWEDELPISRRARKLVSNSMPINANLHSSNEDSEEEEIVK 825
+F WEDEL SRR L++ S+ N HSS+ + +E+ +V+
Sbjct: 136 VFVTTWEDELKSSRRI--LMNQSI---ENCHSSSSEDDEDVVVE 174
>AC025727-4|AAG23388.3| 463|Caenorhabditis elegans Hypothetical
protein Y73E7A.2 protein.
Length = 463
Score = 30.7 bits (66), Expect = 4.5
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 310 GNGEGVSGIRDEGTDDAIPRVGSDEPA---FSDDEEE 343
G G+G + DE DD + + SDE F DDEEE
Sbjct: 218 GEGKGKAAGEDEEDDDDVEEIPSDEEILSDFEDDEEE 254
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 30.7 bits (66), Expect = 4.5
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 794 SRRARKLVSNSMPINANLHSSNEDSEEEEIVKP-KQAKRRKKAISDS 839
S++++K + A SS++D +EEE KP K++K+ KKA+ DS
Sbjct: 264 SKKSKKFKKSEKRKRAVNDSSSDDEDEEE--KPEKRSKKSKKAVIDS 308
>Z68752-9|CAA92985.1| 1208|Caenorhabditis elegans Hypothetical
protein K08E4.1 protein.
Length = 1208
Score = 29.9 bits (64), Expect = 7.8
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 796 RARKLVSNSMPINANLHSSNEDSEEEEIV--KPKQAKRRKKAISDSD 840
R RKL S S ++ ++D E+E + K K+ KR+ KA S D
Sbjct: 35 RKRKLASESEKSGSDDDDDDDDDEDENVTSKKSKKQKRKNKAPSGRD 81
>Z68316-8|CAA92685.1| 1208|Caenorhabditis elegans Hypothetical
protein K08E4.1 protein.
Length = 1208
Score = 29.9 bits (64), Expect = 7.8
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 796 RARKLVSNSMPINANLHSSNEDSEEEEIV--KPKQAKRRKKAISDSD 840
R RKL S S ++ ++D E+E + K K+ KR+ KA S D
Sbjct: 35 RKRKLASESEKSGSDDDDDDDDDEDENVTSKKSKKQKRKNKAPSGRD 81
>AF043704-1|AAK21475.1| 487|Caenorhabditis elegans Hypothetical
protein W01B11.3 protein.
Length = 487
Score = 29.9 bits (64), Expect = 7.8
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 780 SELFSLAWEDELPISRRARKLVSNSMPINANLHSSNEDSEEEEIVKPKQAKRR-----KK 834
SE + + P SR+ ++ N NA E+ +EE+ +P++ K++ KK
Sbjct: 420 SETYEYDASADTPASRKHKRFDDNEESTNAIKKMKIEEVKEEDEAEPEKKKKKKEKKAKK 479
Query: 835 AISDSD 840
A +DSD
Sbjct: 480 ADTDSD 485
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.320 0.134 0.398
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,044,598
Number of Sequences: 27539
Number of extensions: 926485
Number of successful extensions: 3410
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 3391
Number of HSP's gapped (non-prelim): 24
length of query: 840
length of database: 12,573,161
effective HSP length: 88
effective length of query: 752
effective length of database: 10,149,729
effective search space: 7632596208
effective search space used: 7632596208
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 64 (29.9 bits)
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