GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001429-TA|BGIBMGA001429-PA|undefined
         (61 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    20   7.5  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    20   7.5  

>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 7/21 (33%), Positives = 15/21 (71%)

Query: 34  VDPELCIAAGLSPLSTWTMTE 54
           VD +L  +AG++ +S W +++
Sbjct: 300 VDRKLQASAGVTKVSMWQLSD 320


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 8/37 (21%), Positives = 18/37 (48%)

Query: 9   RSTRGLPRVVIATVVTRIPLFKDGGVDPELCIAAGLS 45
           R+ + +  V +  + + +P+      D E C  +G+S
Sbjct: 795 RAYKTISHVAVCVIASMVPICLILAEDSECCSFSGVS 831


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.324    0.137    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,814
Number of Sequences: 2123
Number of extensions: 1588
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 61
length of database: 516,269
effective HSP length: 40
effective length of query: 21
effective length of database: 431,349
effective search space:  9058329
effective search space used:  9058329
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.1 bits)
S2: 39 (19.8 bits)