Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001428-TA|BGIBMGA001428-PA|IPR001762|Disintegrin,
IPR006025|Peptidase M, neutral zinc metallopeptidases, zinc-binding
site, IPR001590|Peptidase M12B, ADAM/reprolysin
(648 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase Mde10|S... 96 1e-20
SPBC215.14c |vps20||vacuolar sorting protein Vps20|Schizosacchar... 31 0.38
SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces pombe... 31 0.66
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 30 1.2
SPBC30B4.02c |||R3H and G-patch domain, unknown biological role|... 29 2.0
SPCC970.09 |sec8||exocyst complex subunit Sec8|Schizosaccharomyc... 29 2.7
SPAC631.02 |||bromodomain protein|Schizosaccharomyces pombe|chr ... 29 2.7
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 28 3.5
SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharom... 28 4.6
SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation co... 28 4.6
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 4.6
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 27 6.1
SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces po... 27 6.1
SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein Sap155|Sc... 27 8.1
SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr 2||... 27 8.1
SPAC22E12.11c |set3||histone lysine methyltransferase Set3|Schiz... 27 8.1
>SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase
Mde10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 512
Score = 96.3 bits (229), Expect = 1e-20
Identities = 66/176 (37%), Positives = 86/176 (48%), Gaps = 23/176 (13%)
Query: 399 LVTAHEFGHNWGSEHDPDVAEC---SPAASQGGSYL-----MYTYSVSG-YDVNNKRFSP 449
LV AHE GH G HD + C S A S L +Y + S Y N RFS
Sbjct: 225 LVVAHEIGHILGLIHDCNKKSCGDHSEACCPLSSSLCDAQELYIMNPSNSYTYANLRFSD 284
Query: 450 CSLRSIRKVLQAK--SGRCFSEPEESF------CGNLRVEGGEECDAGLLGTEDNDMCCD 501
CS+ + +++ K S C S+P E CGN VE GEECD G +N+ CCD
Sbjct: 285 CSILQLHSLVEKKYVSLSCLSKPSEKSVLRLGTCGNGIVEDGEECDCG--EDCENNPCCD 342
Query: 502 -KNCKLRKNQGAVCSDKNSPCCAGCVFAPPGLVCREAAHSACEGEAICNGASADCP 556
K CKL K G++C D+ CC C F G +CR++ + C+ C G S+ CP
Sbjct: 343 GKTCKLTK--GSLCDDQQDACCYQCHFKNAGTLCRQST-NPCDKPEFCTGISSKCP 395
>SPBC215.14c |vps20||vacuolar sorting protein
Vps20|Schizosaccharomyces pombe|chr 2|||Manual
Length = 226
Score = 31.5 bits (68), Expect = 0.38
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Query: 128 DGKSMITYRSSDIRYSWAGDAIPNKPRVCGYVKE------GKELEDDSDDVQEEYDIELK 181
+G ++I +D+ G ++ YV E G+ D D++QEE D ++
Sbjct: 101 EGTNLIRQLQADMPLERVGRICNDRDEAMSYVDEVNDMLQGRMSRDQEDEIQEELDSLIR 160
Query: 182 HEQLEKEKYLDQTNSYHPANEADTSNDGPKK 212
++ EK K L++ + P+ D P K
Sbjct: 161 EQEDEKVKDLEKP-GFTPSTGVDVLPSVPLK 190
>SPAC3G9.11c |||pyruvate decarboxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 570
Score = 30.7 bits (66), Expect = 0.66
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 299 VRGGEAHYNMVREKWDVRNLLEVF----SREYS-HKDFCLAHLFTDLKF-EGGILGLAYV 352
+ G A YN + +WD +NLL+ + SR Y+ H + L LF D +F + ++ L V
Sbjct: 487 IHGLHAVYNDINTEWDYQNLLKGYGAKNSRSYNIHSEKELLDLFKDEEFGKADVIQLVEV 546
Query: 353 GSP 355
P
Sbjct: 547 HMP 549
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 152 KPRVCGYVKEGKELEDDSDDVQEEYDIELKHEQLEKEKYLDQTNSYHPANEAD-TSNDGP 210
KP+ C +G EL D D++ +Y+ ELK + + K S H + + S+ P
Sbjct: 372 KPKNCKTYGDGTEL-DTLDELPVDYEFELKLRKKQTTKVSGTPKSKHAGSTQEWHSHTTP 430
Query: 211 KKRTKRQSD 219
+ +K +++
Sbjct: 431 RSTSKHENN 439
>SPBC30B4.02c |||R3H and G-patch domain, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 165 LEDDSDDVQEEYDIELKHEQLEKEKYLDQTNSY 197
LE+D DD E+ ++E + E+ E+EK + ++Y
Sbjct: 263 LEEDDDDEDEDEELEGEKEEEEEEKEKPEISNY 295
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 164 ELEDDSDDVQEEYDIELKHEQLEKEK 189
E +DD +D EE + E + E+ EKEK
Sbjct: 264 EEDDDDEDEDEELEGEKEEEEEEKEK 289
>SPCC970.09 |sec8||exocyst complex subunit Sec8|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1088
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 159 VKEGKELEDDSDDVQEEYDIELKHEQLEKEKYLDQTNSYHPANEADTSNDGPKKRTKRQS 218
+KE K + +D++DV + ++L H+ + +++ +P+ E N+ + KR
Sbjct: 719 LKEYKHVNEDTEDVDDTVRVKLLHDDVTYPQFIKFLKQKNPSLEG--LNELCRMENKRLL 776
Query: 219 DYE 221
YE
Sbjct: 777 QYE 779
>SPAC631.02 |||bromodomain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 727
Score = 28.7 bits (61), Expect = 2.7
Identities = 32/145 (22%), Positives = 57/145 (39%), Gaps = 12/145 (8%)
Query: 54 SSVLHSNFKAYSVDADGKETTVHVDRENFFTGRVFGETKSDVKLHMEDGVMTGIIHTPDE 113
SS H + +VD D K+ ++ + E + + T ++ ED +T +
Sbjct: 103 SSPTHPSVSNITVDGDSKKHSLQLQEEEKSSESLDSHTHPPKRVRNEDDSLTF-----SK 157
Query: 114 TYHVEPSWRHLPDLDGKSMITYRSSDIRYSWAGDAIPNKPRVCGYVKEGKELEDDSDDVQ 173
T V PS L D ++ S+ I+ + A P+ + G E S
Sbjct: 158 TSPVSPS--SLKDGASNTVTNDASNKIKSEASESASPSALQALDSTAAGSSKEHSS---- 211
Query: 174 EEYDIELKHEQLEKEKYLDQTNSYH 198
+D +K E+ +K++Y T H
Sbjct: 212 -PHDETVKKEENDKDQYPPMTKEQH 235
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 28.3 bits (60), Expect = 3.5
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 160 KEGKELEDDSDDVQEEY--DIE--LKHEQLEKEKYLDQTNSYHPANEADTSNDGPKKRTK 215
+E ELE SDD EE D+E L +Q + ++ S ++ D D K K
Sbjct: 206 REEAELEFVSDDEDEEEISDLEDWLGSDQSMETSESEEEESSESESDEDEDEDNKGKIRK 265
Query: 216 RQSDYEYTPTKTRCP 230
R++D K R P
Sbjct: 266 RKTDDAKKSRKKRAP 280
>SPCC1183.07 |||U3 snoRNP-associated protein
Rrp5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1690
Score = 27.9 bits (59), Expect = 4.6
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 549 NGASADCPKGVCEKTIQDVVERFWD--IIEDININNVLGFL 587
NG++ + V IQ VV D I+ DI INN GFL
Sbjct: 214 NGSAPEAADFVAGSMIQAVVSSIEDHGIVFDIGINNYTGFL 254
>SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation
complex subunit Cdc45|Schizosaccharomyces pombe|chr
1|||Manual
Length = 638
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 48 LILHPQSSVLHSNFKAYSVDADGKETTVHVDRENFFTGRVFGETKSDVKLHMED 101
L +H QSS + N ++YS+ D EN GR G+T D + +ED
Sbjct: 259 LEIHCQSSKKYFN-RSYSLLKDEVNRLNPSPLENQIVGRAHGKTPHDQSIRLED 311
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.9 bits (59), Expect = 4.6
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 161 EGKELEDDSDDVQEEYDIELKHEQLEKEK 189
E E +D++ DV+EE + E + EQ++ E+
Sbjct: 394 EPSEKDDENKDVEEEQEQEQEEEQIDPEE 422
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/60 (25%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 151 NKPRVCGYVKEGKELEDDSDDVQEEYDIELKH--EQLEKEKYLDQTNSYHPANEADTSND 208
+K R+ KE +++E+++ ++E+Y++E E + ++ LD+ + A +A+ ND
Sbjct: 441 SKERLKAARKEAEQVEEETRPIREKYELEKSRGSELQDAKRRLDELKA--KAEDAERRND 498
>SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 27.5 bits (58), Expect = 6.1
Identities = 18/86 (20%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 136 RSSDIRYSWAGDAIPNKPRVCGYVKEGKELEDDSDDVQEEYDIELKHEQLEKEKYLDQTN 195
R + W + P V E +E E+++D+++EE+D E + ++ E+E+ D
Sbjct: 151 RVTRFNIQWDNPDFDDAPPVQPDADEEEE-EEEADEMEEEFDEEGEGDE-EEEEEDDGDG 208
Query: 196 SYHPANEADTSNDGPKKRTKRQSDYE 221
+ + NDG + + + +
Sbjct: 209 DGEGDGDGEGENDGKGSEEEEEEEID 234
>SPAC27F1.09c |prp10|sap155|U2 snRNP-associated protein
Sap155|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1188
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 169 SDDVQEEYD--IELKHEQLEKEKYLDQTNSYHPANEADTSNDGPKKRTKRQSDYEYTPTK 226
S + +EEYD I+++++ + E +TN + + + PK+ +D Y P +
Sbjct: 55 SSNPKEEYDSAIDVRNDISQDEDDYKRTNDVNDSYRLVRQYEAPKELLNEYADESYDPMQ 114
Query: 227 TR 228
R
Sbjct: 115 ER 116
>SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1157
Score = 27.1 bits (57), Expect = 8.1
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 12/110 (10%)
Query: 20 VKRGAKLSNHPYNTIKEVRFKTLGK---DFRLILHPQSSVLHSNFKAYSVDADGKETTVH 76
+KR S HP+ T+ E T+G +++ ILH S + ++ S T +
Sbjct: 540 IKRWPTTSLHPFGTLYE-SIGTIGDPKVEYKAILHDFSCHTYDFPESLSHCVKRLPTPIP 598
Query: 77 VD----RENFFTGRVFGETKSDVKLHME----DGVMTGIIHTPDETYHVE 118
+ R N F D LH++ DGV+T IH D Y+V+
Sbjct: 599 AEELQKRYNLRDKLTFMIGTRDYALHIDTGSIDGVITLGIHVADVAYYVK 648
>SPAC22E12.11c |set3||histone lysine methyltransferase
Set3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 27.1 bits (57), Expect = 8.1
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 165 LEDDSDDVQEEYDIELKHEQLEKEKYLDQTNSYHPANEADTSNDGPKKRTKRQSDYEYTP 224
+E+DS + ++ DI H K D + P +A +DGP K+ K + TP
Sbjct: 501 VEEDSSNRDKKTDIADLHTD-SKVGIADVLSPISP--DAALQSDGPLKKAKEPEESSITP 557
Query: 225 T 225
T
Sbjct: 558 T 558
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.136 0.420
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,265,901
Number of Sequences: 5004
Number of extensions: 151666
Number of successful extensions: 414
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 398
Number of HSP's gapped (non-prelim): 22
length of query: 648
length of database: 2,362,478
effective HSP length: 77
effective length of query: 571
effective length of database: 1,977,170
effective search space: 1128964070
effective search space used: 1128964070
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)
- SilkBase 1999-2023 -