BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001427-TA|BGIBMGA001427-PA|undefined (586 letters) Database: human 224,733 sequences; 73,234,838 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC109061-1|AAI09062.1| 550|Homo sapiens DET1 protein protein. 685 0.0 BC109060-1|AAI09061.1| 550|Homo sapiens DET1 protein protein. 685 0.0 BC001242-1|AAH01242.2| 361|Homo sapiens DET1 protein protein. 487 e-137 AK000965-1|BAA91447.1| 268|Homo sapiens protein ( Homo sapiens ... 379 e-104 BX649632-1|CAI18774.1| 334|Homo sapiens WD repeat domain 5 prot... 35 0.92 BC001635-1|AAH01635.1| 334|Homo sapiens WD repeat domain 5 prot... 35 0.92 AK000552-1|BAA91248.1| 334|Homo sapiens protein ( Homo sapiens ... 35 0.92 AJ011376-1|CAB66159.1| 362|Homo sapiens hypothetical protein pr... 35 0.92 CR457279-1|CAG33560.1| 330|Homo sapiens WDR5B protein. 33 2.1 BC043494-1|AAH43494.1| 330|Homo sapiens WD repeat domain 5B pro... 33 2.1 AK002149-1|BAA92110.1| 330|Homo sapiens protein ( Homo sapiens ... 33 2.1 AF082196-1|AAC36104.1| 119|Homo sapiens anti-pneumococcal/anti-... 32 6.5 >BC109061-1|AAI09062.1| 550|Homo sapiens DET1 protein protein. Length = 550 Score = 685 bits (1693), Expect = 0.0 Identities = 330/560 (58%), Positives = 424/560 (75%), Gaps = 28/560 (5%) Query: 31 IVPRKIKPQNIVIRLMEREIHGSRKPGSHFHVVREFYQNVFPNLTIVNVEKPPCFLRKFS 90 I PR+I+ QN++ RL R I S K G+H+H VR F+QNVFPN T+VNVEKPPCFLRKFS Sbjct: 8 IKPRRIQNQNVIHRLERRRI-SSGKAGTHWHQVRVFHQNVFPNFTVVNVEKPPCFLRKFS 66 Query: 91 PDGKHFIAFSADQTSLEIYEYRGASSAGDLVAGYPTDLLNADADAHH-RIRTHIFYRFFK 149 PDG++FIAFS+DQTSLEIYEY+G +A DL+ GY ++L+ D IR +F RFF Sbjct: 67 PDGRYFIAFSSDQTSLEIYEYQGCQAAEDLLQGYEGEILSNGNDQRSVNIRGRLFERFFV 126 Query: 150 PKFTVNVCQQRDIRSDRLGNMPVMEQQLNRECSLFTEDGRYVIVGSAAHIPDDLRPHFYH 209 NV + LNRECSLFT+D R VIVGSAA++PD+ P F+ Sbjct: 127 LLHITNVAANGE--------------HLNRECSLFTDDCRCVIVGSAAYLPDEPHPPFFE 172 Query: 210 IHSNNEAVTPTIRSPLEDYSLHLVDLHQGKLCDTKHFRIDKIYLSHNQGIYLYKEVLAVL 269 ++ N+E+VTP RSPLEDYSLH++DLH G+LCDT+ F+ DK+ LSHNQG+YLYK +LA+L Sbjct: 173 VYRNSESVTPNPRSPLEDYSLHIIDLHTGRLCDTRTFKCDKVVLSHNQGLYLYKNILAIL 232 Query: 270 SVQHQTIHLYQIV-EGMLIEIRKIGRYCYDDDPFIVSSIIGKSINEK------PFHEETI 322 SVQ QTIH++Q+ EG I++R IGR+CY+DD VS++ + + PF + I Sbjct: 233 SVQQQTIHVFQVTPEGTFIDVRTIGRFCYEDDLLTVSAVFPEVQRDSQTGMANPFRDPFI 292 Query: 323 NSLKHRILVFLFKRAKKITDETGDPLELRKFYKYFDMFKSLRMWKMQLLDEDHLFIKYAS 382 NSLKHR+LV+L++RA ++ G + R+F++YFD + LRMWKMQLLDE+HLFIKY S Sbjct: 293 NSLKHRLLVYLWRRA----EQDGSAMAKRRFFQYFDQLRQLRMWKMQLLDENHLFIKYTS 348 Query: 383 EEVVTLRVAEPNSQSSFFVIYNISQSKVLEIYENTSEALLQLFENYCDCFRNARLCADSQ 442 E+VVTLRV +P SQ+SFFV+YN+ ++V+ ++ENTS+ LL+LFEN+CD FRNA L ++ Q Sbjct: 349 EDVVTLRVTDP-SQASFFVVYNMVTTEVIAVFENTSDELLELFENFCDLFRNATLHSEVQ 407 Query: 443 FTCSPSNNLYARLTQQRFKQTIVRAIYGGRTEATKRILAQLPISAQSYSGSPYLDLGLFS 502 F CS S+N +AR Q+RFK TI+ A YGG TEA +R+L QLPISAQSYSGSPYLDL LFS Sbjct: 408 FPCSASSNNFARQIQRRFKDTIINAKYGGHTEAVRRLLGQLPISAQSYSGSPYLDLSLFS 467 Query: 503 YDDKWVSVMERPKAYGEYPIRFYARDSGLLKFKIYAGVLGQSVPPSARRLVAFTFHPTDP 562 YDDKWVSVMERPK G++PIRFYARDSGLLKF+I AG+LG+ + + RRLVAFTFHP +P Sbjct: 468 YDDKWVSVMERPKTCGDHPIRFYARDSGLLKFEIQAGLLGRPINHTVRRLVAFTFHPFEP 527 Query: 563 FAISVQRTNSEYIVNFHIRN 582 FAISVQRTN+EY+VNFH+R+ Sbjct: 528 FAISVQRTNAEYVVNFHMRH 547 >BC109060-1|AAI09061.1| 550|Homo sapiens DET1 protein protein. Length = 550 Score = 685 bits (1693), Expect = 0.0 Identities = 330/560 (58%), Positives = 424/560 (75%), Gaps = 28/560 (5%) Query: 31 IVPRKIKPQNIVIRLMEREIHGSRKPGSHFHVVREFYQNVFPNLTIVNVEKPPCFLRKFS 90 I PR+I+ QN++ RL R I S K G+H+H VR F+QNVFPN T+VNVEKPPCFLRKFS Sbjct: 8 IKPRRIQNQNVIHRLERRRI-SSGKAGTHWHQVRVFHQNVFPNFTVVNVEKPPCFLRKFS 66 Query: 91 PDGKHFIAFSADQTSLEIYEYRGASSAGDLVAGYPTDLLNADADAHH-RIRTHIFYRFFK 149 PDG++FIAFS+DQTSLEIYEY+G +A DL+ GY ++L+ D IR +F RFF Sbjct: 67 PDGRYFIAFSSDQTSLEIYEYQGCQAAEDLLQGYEGEILSNGNDQRSVNIRGRLFERFFV 126 Query: 150 PKFTVNVCQQRDIRSDRLGNMPVMEQQLNRECSLFTEDGRYVIVGSAAHIPDDLRPHFYH 209 NV + LNRECSLFT+D R VIVGSAA++PD+ P F+ Sbjct: 127 LLHITNVAANGE--------------HLNRECSLFTDDCRCVIVGSAAYLPDEPHPPFFE 172 Query: 210 IHSNNEAVTPTIRSPLEDYSLHLVDLHQGKLCDTKHFRIDKIYLSHNQGIYLYKEVLAVL 269 ++ N+E+VTP RSPLEDYSLH++DLH G+LCDT+ F+ DK+ LSHNQG+YLYK +LA+L Sbjct: 173 VYRNSESVTPNPRSPLEDYSLHIIDLHTGRLCDTRTFKCDKVVLSHNQGLYLYKNILAIL 232 Query: 270 SVQHQTIHLYQIV-EGMLIEIRKIGRYCYDDDPFIVSSIIGKSINEK------PFHEETI 322 SVQ QTIH++Q+ EG I++R IGR+CY+DD VS++ + + PF + I Sbjct: 233 SVQQQTIHVFQVTPEGTFIDVRTIGRFCYEDDLLTVSAVFPEVQRDSQTGMANPFRDPFI 292 Query: 323 NSLKHRILVFLFKRAKKITDETGDPLELRKFYKYFDMFKSLRMWKMQLLDEDHLFIKYAS 382 NSLKHR+LV+L++RA ++ G + R+F++YFD + LRMWKMQLLDE+HLFIKY S Sbjct: 293 NSLKHRLLVYLWRRA----EQDGSAMAKRRFFQYFDQLRQLRMWKMQLLDENHLFIKYTS 348 Query: 383 EEVVTLRVAEPNSQSSFFVIYNISQSKVLEIYENTSEALLQLFENYCDCFRNARLCADSQ 442 E+VVTLRV +P SQ+SFFV+YN+ ++V+ ++ENTS+ LL+LFEN+CD FRNA L ++ Q Sbjct: 349 EDVVTLRVTDP-SQASFFVVYNMVTTEVIAVFENTSDELLELFENFCDLFRNATLHSEVQ 407 Query: 443 FTCSPSNNLYARLTQQRFKQTIVRAIYGGRTEATKRILAQLPISAQSYSGSPYLDLGLFS 502 F CS S+N +AR Q+RFK TI+ A YGG TEA +R+L QLPISAQSYSGSPYLDL LFS Sbjct: 408 FPCSASSNNFARQIQRRFKDTIINAKYGGHTEAVRRLLGQLPISAQSYSGSPYLDLSLFS 467 Query: 503 YDDKWVSVMERPKAYGEYPIRFYARDSGLLKFKIYAGVLGQSVPPSARRLVAFTFHPTDP 562 YDDKWVSVMERPK G++PIRFYARDSGLLKF+I AG+LG+ + + RRLVAFTFHP +P Sbjct: 468 YDDKWVSVMERPKTCGDHPIRFYARDSGLLKFEIQAGLLGRPINHTVRRLVAFTFHPFEP 527 Query: 563 FAISVQRTNSEYIVNFHIRN 582 FAISVQRTN+EY+VNFH+R+ Sbjct: 528 FAISVQRTNAEYVVNFHMRH 547 >BC001242-1|AAH01242.2| 361|Homo sapiens DET1 protein protein. Length = 361 Score = 487 bits (1202), Expect = e-137 Identities = 225/363 (61%), Positives = 291/363 (80%), Gaps = 12/363 (3%) Query: 227 DYSLHLVDLHQGKLCDTKHFRIDKIYLSHNQGIYLYKEVLAVLSVQHQTIHLYQIV-EGM 285 DYSLH++DLH G+LCDT+ F+ DK+ LSHNQG+YLYK +LA+LSVQ QTIH++Q+ EG Sbjct: 1 DYSLHIIDLHTGRLCDTRTFKCDKVVLSHNQGLYLYKNILAILSVQQQTIHVFQVTPEGT 60 Query: 286 LIEIRKIGRYCYDDDPFIVSSIIGKSINEK------PFHEETINSLKHRILVFLFKRAKK 339 I++R IGR+CY+DD VS++ + + PF + INSLKHR+LV+L++RA Sbjct: 61 FIDVRTIGRFCYEDDLLTVSAVFPEVQRDSQTGMANPFRDPFINSLKHRLLVYLWRRA-- 118 Query: 340 ITDETGDPLELRKFYKYFDMFKSLRMWKMQLLDEDHLFIKYASEEVVTLRVAEPNSQSSF 399 ++ G + R+F++YFD + LRMWKMQLLDE+HLFIKY SE+VVTLRV +P SQ+SF Sbjct: 119 --EQDGSAMAKRRFFQYFDQLRQLRMWKMQLLDENHLFIKYTSEDVVTLRVTDP-SQASF 175 Query: 400 FVIYNISQSKVLEIYENTSEALLQLFENYCDCFRNARLCADSQFTCSPSNNLYARLTQQR 459 FV+YN+ ++V+ ++ENTS+ LL+LFEN+CD FRNA L ++ QF CS S+N +AR Q+R Sbjct: 176 FVVYNMVTTEVIAVFENTSDELLELFENFCDLFRNATLHSEVQFPCSASSNNFARQIQRR 235 Query: 460 FKQTIVRAIYGGRTEATKRILAQLPISAQSYSGSPYLDLGLFSYDDKWVSVMERPKAYGE 519 FK TI+ A YGG TEA +R+L QLPISAQSYSGSPYLDL LFSYDDKWVSVMERPK G+ Sbjct: 236 FKDTIINAKYGGHTEAVRRLLGQLPISAQSYSGSPYLDLSLFSYDDKWVSVMERPKTCGD 295 Query: 520 YPIRFYARDSGLLKFKIYAGVLGQSVPPSARRLVAFTFHPTDPFAISVQRTNSEYIVNFH 579 +PIRFYARDSGLLKF+I AG+LG+ + + RRLVAFTFHP +PFAISVQRTN+EY+VNFH Sbjct: 296 HPIRFYARDSGLLKFEIQAGLLGRPINHTVRRLVAFTFHPFEPFAISVQRTNAEYVVNFH 355 Query: 580 IRN 582 +R+ Sbjct: 356 MRH 358 >AK000965-1|BAA91447.1| 268|Homo sapiens protein ( Homo sapiens cDNA FLJ10103 fis, clone HEMBA1002495, weakly similar to LIGHT-MEDIATED DEVELOPMENT PROTEIN DET1. ). Length = 268 Score = 379 bits (933), Expect = e-104 Identities = 175/267 (65%), Positives = 221/267 (82%), Gaps = 5/267 (1%) Query: 316 PFHEETINSLKHRILVFLFKRAKKITDETGDPLELRKFYKYFDMFKSLRMWKMQLLDEDH 375 PF + INSLKHR+LV+L++RA ++ G + R+F++YFD + LRMWKMQLLDE+H Sbjct: 4 PFRDPFINSLKHRLLVYLWRRA----EQDGSAMAKRRFFQYFDQLRQLRMWKMQLLDENH 59 Query: 376 LFIKYASEEVVTLRVAEPNSQSSFFVIYNISQSKVLEIYENTSEALLQLFENYCDCFRNA 435 LFIKY SE+VVTLRV +P SQ+SFFV+YN+ ++V+ ++ENTS+ LL+LFEN+CD FRNA Sbjct: 60 LFIKYTSEDVVTLRVTDP-SQASFFVVYNMVTTEVIAVFENTSDELLELFENFCDLFRNA 118 Query: 436 RLCADSQFTCSPSNNLYARLTQQRFKQTIVRAIYGGRTEATKRILAQLPISAQSYSGSPY 495 L ++ QF CS S+N +AR Q+RFK TI+ A YGG TEA +R+L QLPISAQSYSGSPY Sbjct: 119 TLHSEVQFPCSASSNNFARQIQRRFKDTIINAKYGGHTEAVRRLLGQLPISAQSYSGSPY 178 Query: 496 LDLGLFSYDDKWVSVMERPKAYGEYPIRFYARDSGLLKFKIYAGVLGQSVPPSARRLVAF 555 LDL LFSYDDKWVSVMERPK G++PIRFYARDSGLLKF+I AG+LG+ + + RRLVAF Sbjct: 179 LDLSLFSYDDKWVSVMERPKTCGDHPIRFYARDSGLLKFEIQAGLLGRPINHTVRRLVAF 238 Query: 556 TFHPTDPFAISVQRTNSEYIVNFHIRN 582 TFHP +PFAISVQRTN+EY+VNFH+R+ Sbjct: 239 TFHPFEPFAISVQRTNAEYVVNFHMRH 265 >BX649632-1|CAI18774.1| 334|Homo sapiens WD repeat domain 5 protein. Length = 334 Score = 34.7 bits (76), Expect = 0.92 Identities = 14/37 (37%), Positives = 26/37 (70%), Gaps = 1/37 (2%) Query: 75 TIVNVEKPPCFLRKFSPDGKHFIAFSADQTSLEIYEY 111 T+++ + PP KFSP+GK+ +A + D T L++++Y Sbjct: 208 TLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDY 243 >BC001635-1|AAH01635.1| 334|Homo sapiens WD repeat domain 5 protein. Length = 334 Score = 34.7 bits (76), Expect = 0.92 Identities = 14/37 (37%), Positives = 26/37 (70%), Gaps = 1/37 (2%) Query: 75 TIVNVEKPPCFLRKFSPDGKHFIAFSADQTSLEIYEY 111 T+++ + PP KFSP+GK+ +A + D T L++++Y Sbjct: 208 TLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDY 243 >AK000552-1|BAA91248.1| 334|Homo sapiens protein ( Homo sapiens cDNA FLJ20545 fis, clone KAT11476. ). Length = 334 Score = 34.7 bits (76), Expect = 0.92 Identities = 14/37 (37%), Positives = 26/37 (70%), Gaps = 1/37 (2%) Query: 75 TIVNVEKPPCFLRKFSPDGKHFIAFSADQTSLEIYEY 111 T+++ + PP KFSP+GK+ +A + D T L++++Y Sbjct: 208 TLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDY 243 >AJ011376-1|CAB66159.1| 362|Homo sapiens hypothetical protein protein. Length = 362 Score = 34.7 bits (76), Expect = 0.92 Identities = 14/37 (37%), Positives = 26/37 (70%), Gaps = 1/37 (2%) Query: 75 TIVNVEKPPCFLRKFSPDGKHFIAFSADQTSLEIYEY 111 T+++ + PP KFSP+GK+ +A + D T L++++Y Sbjct: 236 TLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDY 271 >CR457279-1|CAG33560.1| 330|Homo sapiens WDR5B protein. Length = 330 Score = 33.5 bits (73), Expect = 2.1 Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 75 TIVNVEKPPCFLRKFSPDGKHFIAFSADQTSLEIYEY 111 T+V+ + PP KFSP+GK+ + + D T L++++Y Sbjct: 204 TLVDDDNPPVSFVKFSPNGKYILTATLDNT-LKLWDY 239 >BC043494-1|AAH43494.1| 330|Homo sapiens WD repeat domain 5B protein. Length = 330 Score = 33.5 bits (73), Expect = 2.1 Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 75 TIVNVEKPPCFLRKFSPDGKHFIAFSADQTSLEIYEY 111 T+V+ + PP KFSP+GK+ + + D T L++++Y Sbjct: 204 TLVDDDNPPVSFVKFSPNGKYILTATLDNT-LKLWDY 239 >AK002149-1|BAA92110.1| 330|Homo sapiens protein ( Homo sapiens cDNA FLJ11287 fis, clone PLACE1009596, weakly similar to VEGETATIBLE INCOMPATIBILITY PROTEIN HET-E-1. ). Length = 330 Score = 33.5 bits (73), Expect = 2.1 Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Query: 75 TIVNVEKPPCFLRKFSPDGKHFIAFSADQTSLEIYEY 111 T+V+ + PP KFSP+GK+ + + D T L++++Y Sbjct: 204 TLVDDDNPPVSFVKFSPNGKYILTATLDNT-LKLWDY 239 >AF082196-1|AAC36104.1| 119|Homo sapiens anti-pneumococcal/anti-dsDNA Ig H-chain Fab fragment protein. Length = 119 Score = 31.9 bits (69), Expect = 6.5 Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 2/98 (2%) Query: 433 RNARL-CADSQFTCSPSNNLYARLTQQRFKQTIVRAIYGGRTEA-TKRILAQLPISAQSY 490 R+ RL CA S FT S S+ + R + + + Y G T+ + + I + Sbjct: 10 RSLRLSCAASGFTFSGSSMHWVRQAPGKRLEWVAVIWYDGNTKYYADSVKGRFTIFRDNS 69 Query: 491 SGSPYLDLGLFSYDDKWVSVMERPKAYGEYPIRFYARD 528 + YL + +D V R + G+Y I +Y D Sbjct: 70 KNTLYLQMNRLRAEDTAVYYCARDRISGDYDIYYYGMD 107 Database: human Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 73,234,838 Number of sequences in database: 224,733 Lambda K H 0.323 0.139 0.417 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 87,158,400 Number of Sequences: 224733 Number of extensions: 3704786 Number of successful extensions: 7730 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 7697 Number of HSP's gapped (non-prelim): 19 length of query: 586 length of database: 73,234,838 effective HSP length: 94 effective length of query: 492 effective length of database: 52,109,936 effective search space: 25638088512 effective search space used: 25638088512 T: 11 A: 40 X1: 16 ( 7.5 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (22.0 bits) S2: 68 (31.5 bits)
- SilkBase 1999-2023 -