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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001426-TA|BGIBMGA001426-PA|IPR004344|Tubulin-tyrosine
ligase
         (636 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006662-2|AAL06035.1|  535|Caenorhabditis elegans Hypothetical ...   159   4e-39
AC006662-1|AAM98008.2|  707|Caenorhabditis elegans Hypothetical ...   159   4e-39
Z47357-10|CAI46580.1|  563|Caenorhabditis elegans Hypothetical p...   157   3e-38
Z47357-9|CAA87425.3|  601|Caenorhabditis elegans Hypothetical pr...   157   3e-38
Z81051-1|CAB02862.3|  677|Caenorhabditis elegans Hypothetical pr...   150   3e-36
Z81512-5|CAI79169.1|  417|Caenorhabditis elegans Hypothetical pr...   134   2e-31
Z47809-7|CAA87783.1|  662|Caenorhabditis elegans Hypothetical pr...    39   0.009
Z47808-10|CAA87778.1|  662|Caenorhabditis elegans Hypothetical p...    39   0.009
Z71181-7|CAA94900.2|  485|Caenorhabditis elegans Hypothetical pr...    36   0.066
U32275-1|AAA75370.1|  982|Caenorhabditis elegans serine-threonin...    33   0.81 
U11280-5|AAA19437.1|  982|Caenorhabditis elegans Protein kinase ...    33   0.81 
U00052-13|AAW88393.1|  608|Caenorhabditis elegans Hypothetical p...    31   1.9  
U00052-12|AAK21428.2|  631|Caenorhabditis elegans Hypothetical p...    31   1.9  
Z68316-5|CAL49438.1|  326|Caenorhabditis elegans Hypothetical pr...    30   4.3  
Z14092-11|CAI46627.1|  817|Caenorhabditis elegans Hypothetical p...    30   5.7  
Z14092-5|CAD45600.1|  816|Caenorhabditis elegans Hypothetical pr...    30   5.7  
Z14092-4|CAD45599.1|  820|Caenorhabditis elegans Hypothetical pr...    30   5.7  
Z14092-3|CAA78473.3|  754|Caenorhabditis elegans Hypothetical pr...    30   5.7  
AF036688-1|AAB88316.1|  225|Caenorhabditis elegans Hypothetical ...    30   5.7  

>AC006662-2|AAL06035.1|  535|Caenorhabditis elegans Hypothetical
           protein H23L24.3a protein.
          Length = 535

 Score =  159 bits (387), Expect = 4e-39
 Identities = 87/207 (42%), Positives = 126/207 (60%), Gaps = 10/207 (4%)

Query: 121 FIIKPECGSQGRGIYLTKSLKDIKPSD-KLICQVYLSKPFLV-DGYKFDIRVYTLITSCD 178
           FI+KP+ G+QG GIYL  S   I+  D + + Q Y++ P L+ D  KFD RVY +I S +
Sbjct: 75  FIVKPDEGAQGTGIYLINSPNQIRNVDQRQLVQEYVADPLLMNDKLKFDFRVYGVIKSIN 134

Query: 179 PLRIFVYNEGLVRFATSRYADPNANNTTNVFMHLTNYALNKHSRTYVY-----DSEAGSK 233
           PL I+V  EG+ RF T +Y  P+++N  N++ HLTNY+LNK +  YV+     D   GSK
Sbjct: 135 PLSIYVAREGMARFCTEKYEKPDSSNFKNLYAHLTNYSLNKANEAYVHSNTLQDQTRGSK 194

Query: 234 RKISTLNKILLSQGVDLDKLWHSIDEVIVKTIISAWP-ILKHSYHACFPSHDMVHACFEI 292
           R +ST+   L S+GV   +LWH I  ++VKT ++  P I+ H  H  + S      CF+I
Sbjct: 195 RLLSTVFHQLESRGVKTKRLWHDIKLILVKTTLAMLPEIMLHYEHHFYDSTG--PQCFQI 252

Query: 293 LGFDILLDHKLHPYILEVNHSPSFHTD 319
           +GFD+++     P +LEVN +PS   D
Sbjct: 253 MGFDVMIREDGTPILLEVNAAPSLTAD 279


>AC006662-1|AAM98008.2|  707|Caenorhabditis elegans Hypothetical
           protein H23L24.3b protein.
          Length = 707

 Score =  159 bits (387), Expect = 4e-39
 Identities = 87/207 (42%), Positives = 126/207 (60%), Gaps = 10/207 (4%)

Query: 121 FIIKPECGSQGRGIYLTKSLKDIKPSD-KLICQVYLSKPFLV-DGYKFDIRVYTLITSCD 178
           FI+KP+ G+QG GIYL  S   I+  D + + Q Y++ P L+ D  KFD RVY +I S +
Sbjct: 247 FIVKPDEGAQGTGIYLINSPNQIRNVDQRQLVQEYVADPLLMNDKLKFDFRVYGVIKSIN 306

Query: 179 PLRIFVYNEGLVRFATSRYADPNANNTTNVFMHLTNYALNKHSRTYVY-----DSEAGSK 233
           PL I+V  EG+ RF T +Y  P+++N  N++ HLTNY+LNK +  YV+     D   GSK
Sbjct: 307 PLSIYVAREGMARFCTEKYEKPDSSNFKNLYAHLTNYSLNKANEAYVHSNTLQDQTRGSK 366

Query: 234 RKISTLNKILLSQGVDLDKLWHSIDEVIVKTIISAWP-ILKHSYHACFPSHDMVHACFEI 292
           R +ST+   L S+GV   +LWH I  ++VKT ++  P I+ H  H  + S      CF+I
Sbjct: 367 RLLSTVFHQLESRGVKTKRLWHDIKLILVKTTLAMLPEIMLHYEHHFYDSTG--PQCFQI 424

Query: 293 LGFDILLDHKLHPYILEVNHSPSFHTD 319
           +GFD+++     P +LEVN +PS   D
Sbjct: 425 MGFDVMIREDGTPILLEVNAAPSLTAD 451


>Z47357-10|CAI46580.1|  563|Caenorhabditis elegans Hypothetical
           protein ZK1128.6b protein.
          Length = 563

 Score =  157 bits (380), Expect = 3e-38
 Identities = 82/235 (34%), Positives = 136/235 (57%), Gaps = 6/235 (2%)

Query: 108 EALNYSKTRKNKTFIIKPECGSQGRGIYLTKSLKDIKPSDKLICQVYLSKPFLVDGYKFD 167
           E L Y +T  ++  I+KP   ++G GI +T+  KD   +  L+ Q Y+ +P  ++  KFD
Sbjct: 200 ELLKYLETDASRHVIVKPPASARGTGISVTRKPKDFPTTATLVAQHYIERPLTINRAKFD 259

Query: 168 IRVYTLITSCDPLRIFVYNEGLVRFATSRYADPNANNTTNVFMHLTNYALNKHSRTYVYD 227
           +R+Y  + + +PLR+++Y++GLVRFA+  Y+  + +  +N +MHLTNY++NK +      
Sbjct: 260 LRLYAYVPTFEPLRVYIYDQGLVRFASVPYSH-SVSTISNKYMHLTNYSINKLAEADGVA 318

Query: 228 SEAGSKRKISTLNKILLSQGVDLDKLWHSIDEVIVKTIISA-WPILKHSYHACFPSHDMV 286
           ++   K  +  L +     GVD +K+   I+EVI+K  IS   PI +H   + F   + +
Sbjct: 319 NKPVPKWTLHHLWEHFDEMGVDREKIQREIEEVIIKAFISTEKPIREHM--SRFLEQEFI 376

Query: 287 HACFEILGFDILLDHKLHPYILEVNHSPSFHTDTQLDREVKENLLTDTFTMLNIW 341
             C+E+ G DI+LD    P++LEVN SPS H+ T LD  VK  L  D   +  ++
Sbjct: 377 --CYELFGIDIILDEDYKPWLLEVNISPSLHSGTPLDVSVKAPLAKDVLNLAGVY 429


>Z47357-9|CAA87425.3|  601|Caenorhabditis elegans Hypothetical
           protein ZK1128.6a protein.
          Length = 601

 Score =  157 bits (380), Expect = 3e-38
 Identities = 82/235 (34%), Positives = 136/235 (57%), Gaps = 6/235 (2%)

Query: 108 EALNYSKTRKNKTFIIKPECGSQGRGIYLTKSLKDIKPSDKLICQVYLSKPFLVDGYKFD 167
           E L Y +T  ++  I+KP   ++G GI +T+  KD   +  L+ Q Y+ +P  ++  KFD
Sbjct: 238 ELLKYLETDASRHVIVKPPASARGTGISVTRKPKDFPTTATLVAQHYIERPLTINRAKFD 297

Query: 168 IRVYTLITSCDPLRIFVYNEGLVRFATSRYADPNANNTTNVFMHLTNYALNKHSRTYVYD 227
           +R+Y  + + +PLR+++Y++GLVRFA+  Y+  + +  +N +MHLTNY++NK +      
Sbjct: 298 LRLYAYVPTFEPLRVYIYDQGLVRFASVPYSH-SVSTISNKYMHLTNYSINKLAEADGVA 356

Query: 228 SEAGSKRKISTLNKILLSQGVDLDKLWHSIDEVIVKTIISA-WPILKHSYHACFPSHDMV 286
           ++   K  +  L +     GVD +K+   I+EVI+K  IS   PI +H   + F   + +
Sbjct: 357 NKPVPKWTLHHLWEHFDEMGVDREKIQREIEEVIIKAFISTEKPIREHM--SRFLEQEFI 414

Query: 287 HACFEILGFDILLDHKLHPYILEVNHSPSFHTDTQLDREVKENLLTDTFTMLNIW 341
             C+E+ G DI+LD    P++LEVN SPS H+ T LD  VK  L  D   +  ++
Sbjct: 415 --CYELFGIDIILDEDYKPWLLEVNISPSLHSGTPLDVSVKAPLAKDVLNLAGVY 467


>Z81051-1|CAB02862.3|  677|Caenorhabditis elegans Hypothetical
           protein C55A6.2 protein.
          Length = 677

 Score =  150 bits (363), Expect = 3e-36
 Identities = 87/261 (33%), Positives = 149/261 (57%), Gaps = 14/261 (5%)

Query: 121 FIIKPECGSQGRGIYLTKSLKDIKPSDKLICQVYLSKPFLVDGYKFDIRVYTLITSCDPL 180
           FI+KP    QG+GI+   S+ DI     L+   YL  P+LV+ +KFD+R+Y  +TS  PL
Sbjct: 194 FIVKPTNSRQGKGIFFANSMADIPAEGPLLVSRYLKDPYLVNNHKFDLRIYVAVTSFYPL 253

Query: 181 RIFVYNEGLVRFATSRYADPNANNTTNVFMHLTNYALNKHSRTYVYD-----SEAGSKRK 235
             +VY+EGL R A+  Y    ++  +N ++HLTNY++NK+S ++V +      + G K  
Sbjct: 254 VAYVYSEGLARLASRPYDTSASSADSNEYVHLTNYSINKNSTSFVRNESMSSEDLGHKWT 313

Query: 236 ISTLNKILLSQGVDLDKLWHSIDEVIVKTIISAWPILKHSYHACFPSHDMVHAC--FEIL 293
           +  L + + ++G D   L   I+++IVK+++S    +++S  A     ++  AC  FE+ 
Sbjct: 314 LGALLRYVENEGKDAKLLMLRIEDLIVKSLLS----IQNSV-ATASRTNLRFACTNFELF 368

Query: 294 GFDILLDHKLHPYILEVNHSPSFHTDTQLDREVKENLLTDTFTMLNIWQCDKKRVLEEDR 353
           GFD+L+D  L P++LEVN SPS   D  LD  +K  L+ D   +  +   D+K +++   
Sbjct: 369 GFDVLVDQALKPWLLEVNLSPSLACDAPLDSLLKTRLIADLLNLACVPLLDRK-IIDSVT 427

Query: 354 KRIRDRL-LQTNKYAETTTID 373
             +R  +  Q ++ +ET  ++
Sbjct: 428 PALRKSMNSQESESSETDDLE 448


>Z81512-5|CAI79169.1|  417|Caenorhabditis elegans Hypothetical
           protein F25C8.5 protein.
          Length = 417

 Score =  134 bits (323), Expect = 2e-31
 Identities = 89/274 (32%), Positives = 142/274 (51%), Gaps = 31/274 (11%)

Query: 112 YSKTRKNKTFIIKPECGSQGRGIYLTKSLKDIKPSDK----------LICQVYLSKPFLV 161
           + K   +  +I+KP  G+QG+GI+L + LK ++   K           + Q Y+  P+LV
Sbjct: 138 FRKYPNDTIWIMKPVAGAQGKGIFLFRKLKHVQEWKKKDSSGSEALPYVVQCYVHNPYLV 197

Query: 162 DGYKFDIRVYTLITSCDPLRIFVYNEGLVRFATSRYADPNANNTTNVFMHLTNYALNKHS 221
            G KFD+R+Y L+TS  PL  +V+ EG  RF+ SRY   + ++  + F+HLTN A+ K +
Sbjct: 198 GGKKFDVRIYVLVTSFRPLNAWVHREGFARFSHSRY---STDSVDDAFVHLTNVAVAKTA 254

Query: 222 RTYVYDSEAGSKRKISTLNKILLS-QGVD-LDKLWHSIDEVIVKTIISAWPILKHSYHAC 279
               YD E G K  +  L +   S  G   L K  + +  VI++++ S   ++    H  
Sbjct: 255 AD--YDPERGLKWSLPKLFRFFKSVHGQSKLSKTMNDLTNVIIESLKSVQNLIIQDNH-- 310

Query: 280 FPSHDMVHACFEILGFDILLDHKLHPYILEVNHSPSFHTDTQLDREVKENLLTDTFTMLN 339
                    CFE+ G+DIL D  L P++LEVN SPS    +Q D E+K  +L     M++
Sbjct: 311 ---------CFELYGYDILFDENLKPWLLEVNASPSLTASSQEDFELKYRILNH---MID 358

Query: 340 IWQCDKKRVLEEDRKRIRDRLLQTNKYAETTTID 373
           +   +KK +  E+     D L++ +K  E   +D
Sbjct: 359 VLDIEKKLIGNENEVGGFDLLIKNSKPVELCKVD 392


>Z47809-7|CAA87783.1|  662|Caenorhabditis elegans Hypothetical
           protein D2013.9 protein.
          Length = 662

 Score = 39.1 bits (87), Expect = 0.009
 Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 11/103 (10%)

Query: 117 KNKTFIIKPECGSQGRGIYLTKSLKDI----KPSDKLICQVYLSKPFLV------DGYKF 166
           ++  +I+KP   ++G  + +T+ L  I    +   K++C+ Y+ +P L       +  KF
Sbjct: 434 QHNVWIVKPWNLARGMDMTVTEDLNQIIRMIETGPKIVCE-YIPRPLLFPRPDNGNKVKF 492

Query: 167 DIRVYTLITSCDPLRIFVYNEGLVRFATSRYADPNANNTTNVF 209
           D+R    +    P+  +VYN   +RFA + ++  N  +    F
Sbjct: 493 DLRYIVFLNGIAPVTAYVYNRFWIRFAINEFSLSNFEDVETHF 535


>Z47808-10|CAA87778.1|  662|Caenorhabditis elegans Hypothetical
           protein D2013.9 protein.
          Length = 662

 Score = 39.1 bits (87), Expect = 0.009
 Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 11/103 (10%)

Query: 117 KNKTFIIKPECGSQGRGIYLTKSLKDI----KPSDKLICQVYLSKPFLV------DGYKF 166
           ++  +I+KP   ++G  + +T+ L  I    +   K++C+ Y+ +P L       +  KF
Sbjct: 434 QHNVWIVKPWNLARGMDMTVTEDLNQIIRMIETGPKIVCE-YIPRPLLFPRPDNGNKVKF 492

Query: 167 DIRVYTLITSCDPLRIFVYNEGLVRFATSRYADPNANNTTNVF 209
           D+R    +    P+  +VYN   +RFA + ++  N  +    F
Sbjct: 493 DLRYIVFLNGIAPVTAYVYNRFWIRFAINEFSLSNFEDVETHF 535


>Z71181-7|CAA94900.2|  485|Caenorhabditis elegans Hypothetical
           protein K07C5.7 protein.
          Length = 485

 Score = 36.3 bits (80), Expect = 0.066
 Identities = 25/105 (23%), Positives = 51/105 (48%), Gaps = 5/105 (4%)

Query: 237 STLNKILLSQGVDLDKLWHSIDEVIVKTIISAWPILKHSYHACFPSHDMVHACFEILGFD 296
           ST++  L  QG+D  K+W  I  +I +   +    +  S      +  +    FE+  FD
Sbjct: 273 STIDSYLGMQGMDTSKIWLQIRNIIGEVFRTQQTKMLMSLQ----NLKLNPQYFELSRFD 328

Query: 297 ILLDHKLHPYILEVNHSPSFHTDTQLDREV-KENLLTDTFTMLNI 340
            ++D +L+ +++E N SP+  +      ++  E +L + F++  I
Sbjct: 329 FVVDDQLNVFLMEANMSPNLSSGHFKQNQILYEQVLMNIFSLTGI 373


>U32275-1|AAA75370.1|  982|Caenorhabditis elegans serine-threonine
           kinase protein.
          Length = 982

 Score = 32.7 bits (71), Expect = 0.81
 Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 1/67 (1%)

Query: 320 TQLDREVKENLLTDTFTMLNIWQCDKKRVLEEDRKRIRDRLLQTNKYAETTTIDEKDREK 379
           +Q + ++K+ ++ D    L  WQ D++RVL E  ++  + L+   K    T  ++  +E+
Sbjct: 846 SQYESQIKK-MVQDKTVKLESWQEDEQRVLSEKLEKELEELIAYQKKTRATLEEQIKKER 904

Query: 380 TPWQTQI 386
           T  + +I
Sbjct: 905 TALEERI 911


>U11280-5|AAA19437.1|  982|Caenorhabditis elegans Protein kinase
           protein 18, isoforma protein.
          Length = 982

 Score = 32.7 bits (71), Expect = 0.81
 Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 1/67 (1%)

Query: 320 TQLDREVKENLLTDTFTMLNIWQCDKKRVLEEDRKRIRDRLLQTNKYAETTTIDEKDREK 379
           +Q + ++K+ ++ D    L  WQ D++RVL E  ++  + L+   K    T  ++  +E+
Sbjct: 846 SQYESQIKK-MVQDKTVKLESWQEDEQRVLSEKLEKELEELIAYQKKTRATLEEQIKKER 904

Query: 380 TPWQTQI 386
           T  + +I
Sbjct: 905 TALEERI 911


>U00052-13|AAW88393.1|  608|Caenorhabditis elegans Hypothetical
           protein K02F3.12b protein.
          Length = 608

 Score = 31.5 bits (68), Expect = 1.9
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 5/57 (8%)

Query: 345 KKRVLEEDRKRIRDRL-LQTNKYAETTTIDEKDREKTPWQ---TQIQWEESHLGNFR 397
           KK  L + R+ I  ++ L+TN+ ++  T D  DR+  PW    T+I  E+ HL  FR
Sbjct: 33  KKSELTQKRQAIERKIELKTNEDSDVVT-DRWDRDGFPWSDEATKILKEQFHLEKFR 88


>U00052-12|AAK21428.2|  631|Caenorhabditis elegans Hypothetical
           protein K02F3.12a protein.
          Length = 631

 Score = 31.5 bits (68), Expect = 1.9
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 5/57 (8%)

Query: 345 KKRVLEEDRKRIRDRL-LQTNKYAETTTIDEKDREKTPWQ---TQIQWEESHLGNFR 397
           KK  L + R+ I  ++ L+TN+ ++  T D  DR+  PW    T+I  E+ HL  FR
Sbjct: 56  KKSELTQKRQAIERKIELKTNEDSDVVT-DRWDRDGFPWSDEATKILKEQFHLEKFR 111


>Z68316-5|CAL49438.1|  326|Caenorhabditis elegans Hypothetical
           protein K08E4.7 protein.
          Length = 326

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 2/59 (3%)

Query: 317 HTDTQLDREVKENL--LTDTFTMLNIWQCDKKRVLEEDRKRIRDRLLQTNKYAETTTID 373
           HTD+Q++ E  EN+  L D F +  +  C +K +++ D   +  +L+   ++A    +D
Sbjct: 223 HTDSQINIETIENMMVLADLFLIDCLMCCCEKILIKADSVNLAKKLIWAERFALNELMD 281


>Z14092-11|CAI46627.1|  817|Caenorhabditis elegans Hypothetical
           protein R107.4d protein.
          Length = 817

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 4/45 (8%)

Query: 571 DEENWDFK---TGRRKEIWCLWATVSYFCLTKDLEFHHPNGNRCI 612
           +  NW  K   T  + ++W L  T+ YFC T    F H   N+ +
Sbjct: 217 NRHNWKTKSAYTSEQCDLWALGCTL-YFCATGKFPFEHERNNKSL 260


>Z14092-5|CAD45600.1|  816|Caenorhabditis elegans Hypothetical
           protein R107.4c protein.
          Length = 816

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 4/45 (8%)

Query: 571 DEENWDFK---TGRRKEIWCLWATVSYFCLTKDLEFHHPNGNRCI 612
           +  NW  K   T  + ++W L  T+ YFC T    F H   N+ +
Sbjct: 217 NRHNWKTKSAYTSEQCDLWALGCTL-YFCATGKFPFEHERNNKSL 260


>Z14092-4|CAD45599.1|  820|Caenorhabditis elegans Hypothetical
           protein R107.4b protein.
          Length = 820

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 4/45 (8%)

Query: 571 DEENWDFK---TGRRKEIWCLWATVSYFCLTKDLEFHHPNGNRCI 612
           +  NW  K   T  + ++W L  T+ YFC T    F H   N+ +
Sbjct: 217 NRHNWKTKSAYTSEQCDLWALGCTL-YFCATGKFPFEHERNNKSL 260


>Z14092-3|CAA78473.3|  754|Caenorhabditis elegans Hypothetical
           protein R107.4a protein.
          Length = 754

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 4/45 (8%)

Query: 571 DEENWDFK---TGRRKEIWCLWATVSYFCLTKDLEFHHPNGNRCI 612
           +  NW  K   T  + ++W L  T+ YFC T    F H   N+ +
Sbjct: 217 NRHNWKTKSAYTSEQCDLWALGCTL-YFCATGKFPFEHERNNKSL 260


>AF036688-1|AAB88316.1|  225|Caenorhabditis elegans Hypothetical
           protein C24D10.5 protein.
          Length = 225

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 10/29 (34%), Positives = 17/29 (58%)

Query: 382 WQTQIQWEESHLGNFRRVYPVGEQYASLF 410
           W    ++E  HLGNF++ Y +G    ++F
Sbjct: 65  WGNDSEYESGHLGNFKQNYRIGSYGIAMF 93


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.319    0.133    0.402 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,560,504
Number of Sequences: 27539
Number of extensions: 679905
Number of successful extensions: 2049
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2018
Number of HSP's gapped (non-prelim): 22
length of query: 636
length of database: 12,573,161
effective HSP length: 86
effective length of query: 550
effective length of database: 10,204,807
effective search space: 5612643850
effective search space used: 5612643850
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 63 (29.5 bits)

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