Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001424-TA|BGIBMGA001424-PA|undefined
(112 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8S033 Cluster: Putative uncharacterized protein OJ1029... 38 0.040
UniRef50_Q4Q658 Cluster: Putative uncharacterized protein; n=3; ... 34 0.49
UniRef50_UPI0000E8194F Cluster: PREDICTED: hypothetical protein;... 32 2.6
UniRef50_UPI0000DD7D60 Cluster: PREDICTED: hypothetical protein;... 32 2.6
UniRef50_Q9CRH5 Cluster: ES cells cDNA, RIKEN full-length enrich... 31 3.4
UniRef50_Q8G4B8 Cluster: Putative uncharacterized protein; n=2; ... 31 3.4
UniRef50_A3NNH1 Cluster: Putative uncharacterized protein; n=1; ... 31 3.4
UniRef50_A5NRT3 Cluster: Putative uncharacterized protein; n=1; ... 31 4.6
UniRef50_A3BGU3 Cluster: Putative uncharacterized protein; n=1; ... 31 4.6
UniRef50_Q4TE03 Cluster: Chromosome undetermined SCAF5908, whole... 31 6.0
UniRef50_Q2RIH6 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding ... 31 6.0
UniRef50_Q0SBA9 Cluster: Possible permease; n=1; Rhodococcus sp.... 31 6.0
UniRef50_Q2RBH1 Cluster: Putative uncharacterized protein; n=1; ... 31 6.0
UniRef50_A2QJY1 Cluster: Similarity: blast hits result from repe... 31 6.0
UniRef50_Q3JXX3 Cluster: Putative uncharacterized protein; n=5; ... 30 8.0
UniRef50_Q2Y8Z2 Cluster: Putative uncharacterized protein precur... 30 8.0
UniRef50_Q3WEG6 Cluster: Putative uncharacterized protein; n=1; ... 30 8.0
UniRef50_Q2HFP3 Cluster: Putative uncharacterized protein; n=1; ... 30 8.0
>UniRef50_Q8S033 Cluster: Putative uncharacterized protein
OJ1029_F04.21; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OJ1029_F04.21 - Oryza sativa subsp. japonica (Rice)
Length = 214
Score = 37.9 bits (84), Expect = 0.040
Identities = 27/68 (39%), Positives = 30/68 (44%), Gaps = 11/68 (16%)
Query: 51 GARAHPRRYRR------PMPGAATCGHSAGSGTTRRATSRVIRTRALSRRAYETPLLLSL 104
G R H RR RR P A CG G GTT A RAL RR+ P LSL
Sbjct: 91 GRRKHRRRVRRSAWRRRPRSARALCGARRGGGTTSPAA-----YRALFRRSLSPPTTLSL 145
Query: 105 PTNSAIRP 112
P + + P
Sbjct: 146 PPSRIVMP 153
>UniRef50_Q4Q658 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 500
Score = 34.3 bits (75), Expect = 0.49
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 59 YRRPMPGAATCGHSAGSGTTRRATSRVIRTRALSRRAYETPLLLSLPTNSA 109
+RR G++ H+ R + + TR+LS+RA ++ LSLPT+ A
Sbjct: 300 FRRSPSGSSKASHTDSGHRNARGVAHLSLTRSLSQRALKSSSELSLPTSGA 350
>UniRef50_UPI0000E8194F Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 220
Score = 31.9 bits (69), Expect = 2.6
Identities = 20/43 (46%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 49 SFGARAHPRRYRRPMPGAATCGHSAGSGTTRRATSRVIRTRAL 91
S GA+AH R RRP T G GSG R A S V+R L
Sbjct: 153 SHGAKAHLRAERRPRSLRLTWGRGGGSGLRRVALS-VLRADVL 194
>UniRef50_UPI0000DD7D60 Cluster: PREDICTED: hypothetical protein;
n=1; Homo sapiens|Rep: PREDICTED: hypothetical protein -
Homo sapiens
Length = 287
Score = 31.9 bits (69), Expect = 2.6
Identities = 26/81 (32%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Query: 35 PSFAA--LRAQHLEFDSFGARAHPRRYRRPMP-GAATCGHSAGSGTTRRATSRVIRTRAL 91
PSF A +R Q + S AR R P P + GH G+G TRR +R R
Sbjct: 167 PSFLAREIRGQGIPRISPRARHPSRGLPHPRPLRPSPSGHREGAGGTRRGAGDGVRRRRF 226
Query: 92 SRRAYETPLLLSLPTNSAIRP 112
+ + P N A RP
Sbjct: 227 QYKVKQAPSAEGGRKNPASRP 247
>UniRef50_Q9CRH5 Cluster: ES cells cDNA, RIKEN full-length
enriched library, clone:2410025L10 product:hypothetical
protein, full insert sequence; n=1; Mus musculus|Rep:
ES cells cDNA, RIKEN full-length enriched library,
clone:2410025L10 product:hypothetical protein, full
insert sequence - Mus musculus (Mouse)
Length = 127
Score = 31.5 bits (68), Expect = 3.4
Identities = 23/62 (37%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
Query: 38 AALRAQHLEFDSFGARAHPRRYRRPMPGAATCGHSAGSGTTRRATSRVIRTRALSRRAYE 97
AA R + GAR R R PGA G G+G R A R R R + RA
Sbjct: 1 AAARCGTFSLRALGARLPGPRASRLQPGAPAGGAPGGAGGARGARFR--RRRVAAGRALP 58
Query: 98 TP 99
TP
Sbjct: 59 TP 60
>UniRef50_Q8G4B8 Cluster: Putative uncharacterized protein; n=2;
Bifidobacterium longum|Rep: Putative uncharacterized
protein - Bifidobacterium longum
Length = 188
Score = 31.5 bits (68), Expect = 3.4
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 54 AHPRRYRRPMPGAATCGHSA---GSGTTRRATSRVIRTRALSRRAYETP 99
AH RR R +PG GH A G+GT RA ++ RAL E P
Sbjct: 25 AHRRRIRDAVPGRIQAGHRAQRLGAGTGVRAPLPLLCGRALPAHGREHP 73
>UniRef50_A3NNH1 Cluster: Putative uncharacterized protein; n=1;
Burkholderia pseudomallei 668|Rep: Putative
uncharacterized protein - Burkholderia pseudomallei
(strain 668)
Length = 100
Score = 31.5 bits (68), Expect = 3.4
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 53 RAHPRRYRRPMPGAATCGHSAGSGTTRRATSRVIRTRALSRRAYETPLLLSLPTNS 108
R PR R +A +G RR+T+R RTRA RRA+ P +S T +
Sbjct: 39 RERPRDGRGCRHAIRAANSAARAGAGRRSTARASRTRAW-RRAFTAPRAVSTETTA 93
>UniRef50_A5NRT3 Cluster: Putative uncharacterized protein; n=1;
Methylobacterium sp. 4-46|Rep: Putative uncharacterized
protein - Methylobacterium sp. 4-46
Length = 144
Score = 31.1 bits (67), Expect = 4.6
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 57 RRYRRPMPGAATC--GHSAGSGTTRRATSRV 85
RR RRP P TC G SAG+G R T R+
Sbjct: 113 RRCRRPRPSPRTCRAGRSAGTGPGRGRTGRM 143
>UniRef50_A3BGU3 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 342
Score = 31.1 bits (67), Expect = 4.6
Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Query: 51 GARAHPRRYRRPMPGAATCGHSAGSGTTRRATS-RVIRTRALSRRAYETPLLLSLPTNSA 109
GA PR R P P G +AG G RRA R L R +E L + P A
Sbjct: 272 GAHRGPRAGRAPRPRRRLRGEAAGHGEARRARQVRRAGPWLLRARPHERGLRRARPRRQA 331
Query: 110 IR 111
+R
Sbjct: 332 LR 333
>UniRef50_Q4TE03 Cluster: Chromosome undetermined SCAF5908, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF5908,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 62
Score = 30.7 bits (66), Expect = 6.0
Identities = 17/43 (39%), Positives = 20/43 (46%)
Query: 55 HPRRYRRPMPGAATCGHSAGSGTTRRATSRVIRTRALSRRAYE 97
HPRR R PG+A G A G RR T+ + S R E
Sbjct: 9 HPRRRGRAAPGSAGLGQGAVGGHVRRQTTNPSARLSRSERPGE 51
>UniRef50_Q2RIH6 Cluster: 4Fe-4S ferredoxin, iron-sulfur binding
precursor; n=1; Moorella thermoacetica ATCC 39073|Rep:
4Fe-4S ferredoxin, iron-sulfur binding precursor -
Moorella thermoacetica (strain ATCC 39073)
Length = 1067
Score = 30.7 bits (66), Expect = 6.0
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 38 AALRAQHLEFDSFGARAHPRR--YRRPMPGAATCGHSAGSGTTRRA 81
AAL L+ F A +HP+ P+PG TCG +AG G A
Sbjct: 797 AALFRVPLDERGFFATSHPKLKPVETPVPGIYTCGLAAGPGNLEEA 842
>UniRef50_Q0SBA9 Cluster: Possible permease; n=1; Rhodococcus sp.
RHA1|Rep: Possible permease - Rhodococcus sp. (strain
RHA1)
Length = 512
Score = 30.7 bits (66), Expect = 6.0
Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 53 RAHP-RRYRRPMPGAATCGHSAGSGTTRR-ATSRVIRTRALSRRA 95
R HP RR R P A CG G GT R R R R L RR+
Sbjct: 358 RTHPARRNHRYTPVARPCGRGTGRGTHRNYLPHRNTRGRLLCRRS 402
>UniRef50_Q2RBH1 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 185
Score = 30.7 bits (66), Expect = 6.0
Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 35 PSFAALRAQHLEFDSFGARAHPRRYRRPMPGAATCGHSAGSGTTRRAT 82
PS A ++HL D F R RRP G T +AG G +RA+
Sbjct: 50 PSSRACLSKHLRID-FDFLGGQRIGRRPATGVVTVAEAAGMGMRKRAS 96
>UniRef50_A2QJY1 Cluster: Similarity: blast hits result from
repetitive sequences; n=1; Aspergillus niger|Rep:
Similarity: blast hits result from repetitive sequences
- Aspergillus niger
Length = 298
Score = 30.7 bits (66), Expect = 6.0
Identities = 16/38 (42%), Positives = 19/38 (50%)
Query: 57 RRYRRPMPGAATCGHSAGSGTTRRATSRVIRTRALSRR 94
RRY +P AA G G G +RR SR R R + R
Sbjct: 159 RRYLTAVPVAAAAGRGRGRGGSRRRGSRFTRQRPYNLR 196
>UniRef50_Q3JXX3 Cluster: Putative uncharacterized protein; n=5;
Burkholderia|Rep: Putative uncharacterized protein -
Burkholderia pseudomallei (strain 1710b)
Length = 540
Score = 30.3 bits (65), Expect = 8.0
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 54 AHPRRYRRPMPGAATCGHSAGSGTTRRATSRVI-RTRALSRRAYETPLLLSLP 105
A PR+ + P+P T G + T++RA + I R R RR L LP
Sbjct: 116 AQPRKNKTPVPPPRTRGSPMPASTSKRAANAAIRRARHALRRLLAADALQGLP 168
>UniRef50_Q2Y8Z2 Cluster: Putative uncharacterized protein
precursor; n=1; Nitrosospira multiformis ATCC 25196|Rep:
Putative uncharacterized protein precursor -
Nitrosospira multiformis (strain ATCC 25196 / NCIMB
11849)
Length = 338
Score = 30.3 bits (65), Expect = 8.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Query: 45 LEFDSFGARAHPRRYRRPMPG 65
L ++F AR HPRR +P PG
Sbjct: 202 LSSENFAARTHPRRLNKPKPG 222
>UniRef50_Q3WEG6 Cluster: Putative uncharacterized protein; n=1;
Frankia sp. EAN1pec|Rep: Putative uncharacterized
protein - Frankia sp. EAN1pec
Length = 340
Score = 30.3 bits (65), Expect = 8.0
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query: 55 HPRRYRRPMPGAATCGHSAGSG--TTRRA--TSRVIRTRALSRRAY 96
HPR P P G GSG +T R+ T RV R R +RR+Y
Sbjct: 272 HPRNTDHPPPARGALGCWIGSGWCSTARSLPTRRVARVRCSARRSY 317
>UniRef50_Q2HFP3 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized protein
- Chaetomium globosum (Soil fungus)
Length = 1757
Score = 30.3 bits (65), Expect = 8.0
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Query: 47 FDSFGARAHPRRYRRPMPGAATCGHSAGSGTTRR-ATSRVIR------TRALSRRAYETP 99
F++ + P P+PG AT GH+ G RR +T + + R S R ETP
Sbjct: 955 FNNLAPTSRPLSGSFPLPGTATDGHAGGEQNWRRTSTPKGVSGAFDPPERHPSDRRAETP 1014
Query: 100 LLLSLP 105
+L +P
Sbjct: 1015 ILSPIP 1020
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.326 0.134 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,777,712
Number of Sequences: 1657284
Number of extensions: 2944924
Number of successful extensions: 11678
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 11669
Number of HSP's gapped (non-prelim): 19
length of query: 112
length of database: 575,637,011
effective HSP length: 88
effective length of query: 24
effective length of database: 429,796,019
effective search space: 10315104456
effective search space used: 10315104456
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 65 (30.3 bits)
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