GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001424-TA|BGIBMGA001424-PA|undefined
         (112 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97196-1|CAA65830.1| 3429|Drosophila melanogaster hypothetical p...    27   5.6  
AE014298-856|AAF46135.2| 3419|Drosophila melanogaster CG3585-PA ...    27   5.6  
BT011329-1|AAR96121.1| 1659|Drosophila melanogaster SD20887p pro...    27   7.3  
AY058598-1|AAL13827.1|  950|Drosophila melanogaster LD29187p pro...    27   7.3  
AE014134-1101|AAF52390.3| 1659|Drosophila melanogaster CG9537-PA...    27   7.3  
AB062671-1|BAB78519.1| 1645|Drosophila melanogaster Daxx-like pr...    27   7.3  

>X97196-1|CAA65830.1| 3429|Drosophila melanogaster hypothetical
           protein protein.
          Length = 3429

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 41  RAQHLEFDSFGARAHPRRYRRPMPGAATCGHSAGSGT 77
           R +H++   F  R H +     +PGAA+ G ++G GT
Sbjct: 336 RLKHMK-TCFHIRRHMKAGASAVPGAASAGAASGGGT 371


>AE014298-856|AAF46135.2| 3419|Drosophila melanogaster CG3585-PA
           protein.
          Length = 3419

 Score = 27.1 bits (57), Expect = 5.6
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)

Query: 41  RAQHLEFDSFGARAHPRRYRRPMPGAATCGHSAGSGT 77
           R +H++   F  R H +     +PGAA+ G ++G GT
Sbjct: 329 RLKHMK-TCFHIRRHMKAGASAVPGAASAGAASGGGT 364


>BT011329-1|AAR96121.1| 1659|Drosophila melanogaster SD20887p
           protein.
          Length = 1659

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 2/63 (3%)

Query: 52  ARAHPRR--YRRPMPGAATCGHSAGSGTTRRATSRVIRTRALSRRAYETPLLLSLPTNSA 109
           AR  P R   R+      T  H  G   +     R++ T      A   PLLL+LP  ++
Sbjct: 870 ARTLPFRSSQRKTSEAPMTSTHVQGFTASATPPQRLLATPPHCAAALNEPLLLNLPPTTS 929

Query: 110 IRP 112
           I P
Sbjct: 930 ITP 932


>AY058598-1|AAL13827.1|  950|Drosophila melanogaster LD29187p
           protein.
          Length = 950

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 2/63 (3%)

Query: 52  ARAHPRR--YRRPMPGAATCGHSAGSGTTRRATSRVIRTRALSRRAYETPLLLSLPTNSA 109
           AR  P R   R+      T  H  G   +     R++ T      A   PLLL+LP  ++
Sbjct: 161 ARTLPFRSSQRKTSEAPMTSTHVQGFTASATPPQRLLATPPHCAAALNEPLLLNLPPTTS 220

Query: 110 IRP 112
           I P
Sbjct: 221 ITP 223


>AE014134-1101|AAF52390.3| 1659|Drosophila melanogaster CG9537-PA
           protein.
          Length = 1659

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 2/63 (3%)

Query: 52  ARAHPRR--YRRPMPGAATCGHSAGSGTTRRATSRVIRTRALSRRAYETPLLLSLPTNSA 109
           AR  P R   R+      T  H  G   +     R++ T      A   PLLL+LP  ++
Sbjct: 870 ARTLPFRSSQRKTSEAPMTSTHVQGFTASATPPQRLLATPPHCAAALNEPLLLNLPPTTS 929

Query: 110 IRP 112
           I P
Sbjct: 930 ITP 932


>AB062671-1|BAB78519.1| 1645|Drosophila melanogaster Daxx-like
           protein protein.
          Length = 1645

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 2/63 (3%)

Query: 52  ARAHPRR--YRRPMPGAATCGHSAGSGTTRRATSRVIRTRALSRRAYETPLLLSLPTNSA 109
           AR  P R   R+      T  H  G   +     R++ T      A   PLLL+LP  ++
Sbjct: 856 ARTLPFRSSQRKTSEAPMTSTHVQGFTASATPPQRLLATPPHCAAALNEPLLLNLPPTTS 915

Query: 110 IRP 112
           I P
Sbjct: 916 ITP 918


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.326    0.134    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,343,148
Number of Sequences: 52641
Number of extensions: 139217
Number of successful extensions: 640
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 636
Number of HSP's gapped (non-prelim): 6
length of query: 112
length of database: 24,830,863
effective HSP length: 75
effective length of query: 37
effective length of database: 20,882,788
effective search space: 772663156
effective search space used: 772663156
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 55 (26.2 bits)