Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001422-TA|BGIBMGA001422-PA|IPR007087|Zinc finger,
C2H2-type
(273 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524 58 6e-09
01_06_1729 + 39486553-39487413,39487953-39488020,39489574-394901... 57 1e-08
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703... 56 2e-08
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29... 55 5e-08
03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,281... 54 9e-08
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85... 54 1e-07
02_04_0194 + 20820985-20821027,20822168-20822367,20822477-208225... 54 2e-07
02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812 45 6e-05
05_01_0160 + 1081416-1081647,1081840-1082012,1082169-1082246,108... 42 4e-04
01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648 42 4e-04
09_06_0235 - 21763470-21764511,21767865-21768261,21768625-217686... 42 5e-04
03_02_0027 + 5100865-5100878,5102241-5102708,5102795-5103021,510... 41 0.001
10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573 39 0.004
07_03_1042 + 23487326-23487443,23487555-23487957,23488057-234883... 39 0.004
04_04_0823 + 28383798-28383864,28384475-28384877,28387388-283879... 39 0.005
01_05_0421 + 21990034-21990392,21991691-21992681 38 0.011
01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193 37 0.015
02_04_0316 - 21978330-21979397 36 0.035
02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357 36 0.046
04_04_0114 + 22861300-22861476,22864952-22864969,22865187-22867163 32 0.43
09_02_0237 + 6141048-6141962 31 0.75
08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413 31 1.00
10_08_0648 + 19579299-19580618 31 1.3
01_01_1115 + 8828544-8828620,8829608-8829779,8829873-8830183,883... 31 1.3
09_02_0203 - 5746068-5746307,5746469-5746729,5746833-5748239,574... 30 1.7
03_04_0188 - 18241815-18242477 30 1.7
12_02_0128 - 13969118-13969222,13969329-13969460,13969558-139696... 30 2.3
01_01_0990 + 7847066-7847478,7847713-7848679 30 2.3
04_01_0354 - 4646826-4647314 29 3.0
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 29 3.0
09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361 29 4.0
09_02_0366 + 7941550-7942161,7942230-7942775 29 4.0
09_02_0025 + 3088084-3088319,3089582-3089627,3089720-3090475 29 4.0
11_06_0015 + 19281918-19282043,19282263-19282365,19282514-192825... 29 5.3
05_06_0262 - 26746180-26746278,26746371-26746493,26746584-267467... 29 5.3
11_06_0689 - 26294961-26294976,26295271-26295414,26295506-262959... 28 7.0
08_02_1602 - 28148255-28149413,28151927-28152087 28 7.0
12_02_0884 - 23986393-23987486,23988213-23988314,23988561-239886... 28 9.3
07_03_0859 + 22054087-22055421 28 9.3
01_06_1614 - 38648495-38649706 28 9.3
01_06_1412 - 37140654-37141088,37141549-37142214 28 9.3
01_06_0412 + 29159918-29160046,29160148-29160297,29160385-291604... 28 9.3
>03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524
Length = 651
Score = 58.4 bits (135), Expect = 6e-09
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 161 CPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRRSHSGDKPYR 220
C V+ C + + ++R H H+ + PY+C W CS F S + H + H+G +PY+
Sbjct: 565 CTVKSCGRHFRSHKYLRRHQSIHNDDMPYKCPWEGCSMAFKWSWDRGEHFQVHAGKRPYK 624
Query: 221 CVE--CEKRFARSDHLAKHGR 239
C C K + +H R
Sbjct: 625 CTTPGCSKIYKFVSDFTRHKR 645
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 159 FRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRR 211
++CP E CS + + H + H+G++PY+CT CS + + RH+R
Sbjct: 593 YKCPWEGCSMAFKWSWDRGEHFQVHAGKRPYKCTTPGCSKIYKFVSDFTRHKR 645
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 9/85 (10%)
Query: 159 FRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRRSHSGDKP 218
F+C ++ C + + + H K CT C F L RH+ H+ D P
Sbjct: 540 FQCEIDYCRMTFKNRAELSVH-------KKNTCTVKSCGRHFRSHKYLRRHQSIHNDDMP 592
Query: 219 YRC--VECEKRFARSDHLAKHGRVH 241
Y+C C F S +H +VH
Sbjct: 593 YKCPWEGCSMAFKWSWDRGEHFQVH 617
>01_06_1729 + 39486553-39487413,39487953-39488020,39489574-39490154,
39490623-39491432,39491738-39493035
Length = 1205
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 161 CPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRRSHSGDKPYR 220
CPV+ C K + ++ H + H+ ++P C W C+ F H R H+GD+PY
Sbjct: 1111 CPVKGCGKKFFSHKYLLQHRKVHTDDRPLTCPWKGCNMAFKWPWARTEHLRVHTGDRPYV 1170
Query: 221 CVE--CEKRFARSDHLAKHGR 239
C E C + F ++H R
Sbjct: 1171 CHEPGCAQTFRFVSDFSRHKR 1191
>12_01_1024 - 10467644-10469274,10469424-10469482,10469820-10470357,
10470975-10471666,10471912-10472062,10473797-10473864,
10473964-10474042,10474763-10474765,10476427-10477255
Length = 1349
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 161 CPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRRSHSGDKPYR 220
CPV+ C K + ++ H + H E+P +CTW C F H R H+G +PY
Sbjct: 1255 CPVKGCKKKFFCHKYLLQHRKVHIDERPLKCTWKGCKKAFKWPWARTEHMRVHTGVRPYE 1314
Query: 221 CVE--CEKRFARSDHLAKHGR 239
C E C + F ++H R
Sbjct: 1315 CQEPGCGQTFRFVSDFSRHKR 1335
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 160 RCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRR--SHSGDK 217
+C + C K + H+R H+G +PY C C F + +RH+R HS DK
Sbjct: 1284 KCTWKGCKKAFKWPWARTEHMRVHTGVRPYECQEPGCGQTFRFVSDFSRHKRKTGHSSDK 1343
>05_01_0042 -
290077-290676,291093-291233,291675-291764,292364-292563,
292685-292743,292827-292942
Length = 401
Score = 55.2 bits (127), Expect = 5e-08
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Query: 138 KATPEVKVRFGEPKYCPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCS 197
KA PE + EP E+ F C E C K + + +R H H+ E+ Y C C
Sbjct: 69 KAVPEPEAVKPEPT--TEI-LFLCSYENCGKTFVDVAALRKHAHVHN-ERQYICQEPGCG 124
Query: 198 WRFARSDELARHRRSHSGDKPYRCVE--CEKRFARSDHLAKHGRVH 241
+F S +L RH H+G K + C C K F+ +L H + H
Sbjct: 125 KKFVDSSKLKRHHLIHTGQKDFICPHPGCGKAFSLDFNLRSHLKTH 170
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Query: 161 CPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRRSHSGDKPYR 220
C C K + +S ++ H H+G+K + C C F+ L H ++H+ + +
Sbjct: 118 CQEPGCGKKFVDSSKLKRHHLIHTGQKDFICPHPGCGKAFSLDFNLRSHLKTHALENYHV 177
Query: 221 C--VECEKRFARSDHLAKHGRVH 241
C C KRF L H + H
Sbjct: 178 CPFPACGKRFTSDSKLKSHVKGH 200
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 159 FRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRRSH 213
F CP C K ++ ++R+HL+ H+ E + C + C RF +L H + H
Sbjct: 146 FICPHPGCGKAFSLDFNLRSHLKTHALENYHVCPFPACGKRFTSDSKLKSHVKGH 200
>03_01_0360 +
2815067-2816033,2816120-2816198,2816275-2816342,
2817382-2817464,2821566-2823083
Length = 904
Score = 54.4 bits (125), Expect = 9e-08
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 161 CPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRRSHSGDKPYR 220
C E C K ++ +++ H H E+P++C W C F H R H+G++PY+
Sbjct: 819 CTDESCGKRFSSHKYLKRHQCVHRDERPFKCPWDGCPMTFKWLWAQTEHIRVHTGERPYK 878
Query: 221 C--VECEKRFARSDHLAKH 237
C +C + F ++H
Sbjct: 879 CSAPDCGQSFRYVSDYSRH 897
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 159 FRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRR 211
F+CP + C + H+R H+GE+PY+C+ DC F + +RHR+
Sbjct: 847 FKCPWDGCPMTFKWLWAQTEHIRVHTGERPYKCSAPDCGQSFRYVSDYSRHRK 899
>02_01_0113 -
854108-854302,854399-854542,854658-854893,855036-855315,
856891-857031,857259-857372
Length = 369
Score = 54.0 bits (124), Expect = 1e-07
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 164 EECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRRSHSGDKPYRCV- 222
+EC + K +H++ H++ HS E+ + C DC + + R D L RH H G K + C
Sbjct: 63 QECGASFQKPAHLKQHMQSHSDERSFICPLEDCPFSYIRKDHLNRHMLKHQG-KLFTCSM 121
Query: 223 -ECEKRFARSDHLAKH 237
C ++F+ ++ +H
Sbjct: 122 DGCGRKFSIKANMQRH 137
Score = 45.6 bits (103), Expect = 4e-05
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 158 AFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARH-RRSH--- 213
+F CP+E+C Y + H+ H+ +H G K + C+ C +F+ + RH + H
Sbjct: 87 SFICPLEDCPFSYIRKDHLNRHMLKHQG-KLFTCSMDGCGRKFSIKANMQRHVKEIHEDE 145
Query: 214 ---SGDKPYRCVE--CEKRFARSDHLAKHGRVH 241
++ + C E C K F + + KH H
Sbjct: 146 TATKSNRQFVCKEEGCNKVFKYASKMKKHEESH 178
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 136 REKATPEVKVRFGEPKYCPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYR---CT 192
R +AT +R + ++C V + +C + + K ++ + + +GEK T
Sbjct: 2 RVEATQHRDIRRYKCEFCTVVRSKKCLIRAHMVAHHKEELDKSEIYKSNGEKVVHEGDHT 61
Query: 193 WGDCSWRFARSDELARHRRSHSGDKPYRC--VECEKRFARSDHLAKHGRVH 241
+C F + L +H +SHS ++ + C +C + R DHL +H H
Sbjct: 62 CQECGASFQKPAHLKQHMQSHSDERSFICPLEDCPFSYIRKDHLNRHMLKH 112
>02_04_0194 +
20820985-20821027,20822168-20822367,20822477-20822566,
20822820-20822825,20822866-20823009,20823089-20823580
Length = 324
Score = 53.6 bits (123), Expect = 2e-07
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Query: 142 EVKVRFGEPKYCPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFA 201
E + +P+ EV F C E C K + A +R H H GE+ Y C + C +F
Sbjct: 27 EQEAELAKPEPTTEV-LFLCSYEGCGKTFVDAGALRKHAHVH-GERQYVCHYAGCDKKFL 84
Query: 202 RSDELARHRRSHSGDKPYRCVE--CEK--RFARSDHLAKHGRVH 241
S +L RH H+G+K + C C K F+ +L H + H
Sbjct: 85 DSSKLKRHFLIHTGEKNFVCPHEGCGKVLAFSLDFNLKAHMKTH 128
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 159 FRCPVEECSKLYAKAS--HVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARH 209
F CP E C K+ A + +++AH++ HS + + C + +C+ RF + +L H
Sbjct: 102 FVCPHEGCGKVLAFSLDFNLKAHMKTHSVDNYHVCKYPECARRFTQESKLRAH 154
>02_04_0007 - 18858587-18859529,18860434-18860830,18861674-18861812
Length = 492
Score = 45.2 bits (102), Expect = 6e-05
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 153 CPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRRS 212
CPE+ CP + ++ + ++ H R GEK ++C CS ++A + H +
Sbjct: 109 CPEI---TCPHHDATRALGDLTGIKKHYSRKHGEKKWKC--DRCSKKYAVQSDWKAHTKI 163
Query: 213 HSGDKPYRCVECEKRFARSDHLAKH 237
G K YRC +C F+R D H
Sbjct: 164 -CGTKEYRC-DCGTIFSRKDSFITH 186
Score = 37.1 bits (82), Expect = 0.015
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 152 YCPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHR 210
Y + G + + CSK YA S +AH + G K YRC DC F+R D HR
Sbjct: 133 YSRKHGEKKWKCDRCSKKYAVQSDWKAH-TKICGTKEYRC---DCGTIFSRKDSFITHR 187
>05_01_0160 +
1081416-1081647,1081840-1082012,1082169-1082246,
1082372-1082529,1082558-1082709,1083232-1083290,
1083633-1083912,1084235-1084470,1084601-1084744,
1084845-1085012
Length = 559
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 10/92 (10%)
Query: 159 FRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARH-RRSHSGDK 217
F C V+ C Y++ H+ HL H G K + C C+ +F + RH + H
Sbjct: 287 FSCHVDGCPFSYSRKDHLNRHLLTHQG-KLFACPMEGCNRKFTIKGNIQRHVQEMHKDGS 345
Query: 218 P------YRCVE--CEKRFARSDHLAKHGRVH 241
P + C E C K F + L KH H
Sbjct: 346 PCESKKEFICPEENCGKTFKYASKLQKHEESH 377
Score = 35.1 bits (77), Expect = 0.061
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 186 EKPYRCTWGDCSWRFARSDELARHRRSHSGDKPYRC-VE-CEKRFARSDHLAKH 237
++P+ C C + ++R D L RH +H G K + C +E C ++F ++ +H
Sbjct: 284 QRPFSCHVDGCPFSYSRKDHLNRHLLTHQG-KLFACPMEGCNRKFTIKGNIQRH 336
Score = 32.7 bits (71), Expect = 0.33
Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 160 RCPVEECSKLYAKASHVRAHLRR-HSGEKPYRCTWGDCSWRFARSDELARHRRS 212
RC +++C ++K S++ H++ H ++P+ C + C F+ H +S
Sbjct: 444 RCHLKDCKLSFSKKSNLDKHVKAVHEQKRPFVCGFSGCGKSFSYKHVRDNHEKS 497
Score = 27.9 bits (59), Expect = 9.3
Identities = 17/62 (27%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Query: 153 CPEVGAFRCPVEECSKLYAKASHVRAHLRRH--SGEKPYRCTWGDCSWRFARSDELARHR 210
C F CP E C K + AS ++ H H C C F + L H
Sbjct: 347 CESKKEFICPEENCGKTFKYASKLQKHEESHVKLDYSEVICCEPGCMKAFTNLECLKAHN 406
Query: 211 RS 212
+S
Sbjct: 407 KS 408
>01_01_0667 + 5099026-5099188,5099262-5099661,5099748-5100648
Length = 487
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 153 CPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRRS 212
CPE G C + ++ + ++ H R GEK ++C CS R+A + H +
Sbjct: 118 CPEAG---CVHHDPARALGDLTGIKKHFSRKHGEKKWKC--DKCSKRYAVHSDWKAHSKV 172
Query: 213 HSGDKPYRCVECEKRFARSDHLAKH 237
G + YRC +C F+R D H
Sbjct: 173 -CGTREYRC-DCGTLFSRRDSFITH 195
>09_06_0235 -
21763470-21764511,21767865-21768261,21768625-21768632,
21769489-21769565
Length = 507
Score = 41.9 bits (94), Expect = 5e-04
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 153 CPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRRS 212
CPE C + S+ + ++ H R GEK +RC CS R+A + H ++
Sbjct: 91 CPEPS---CVHHDPSRALGDLTGIKKHYCRKHGEKKWRC--DKCSKRYAVQSDWKAHSKT 145
Query: 213 HSGDKPYRCVECEKRFARSDHLAKH 237
G + YRC +C F+R D H
Sbjct: 146 -CGTREYRC-DCGTLFSRRDSFITH 168
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 152 YCPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHR 210
YC + G + ++CSK YA S +AH + G + YRC DC F+R D HR
Sbjct: 115 YCRKHGEKKWRCDKCSKRYAVQSDWKAH-SKTCGTREYRC---DCGTLFSRRDSFITHR 169
>03_02_0027 +
5100865-5100878,5102241-5102708,5102795-5103021,
5103670-5104577
Length = 538
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 136 REKATPEVKVRFGEPKYCPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGD 195
R+++ EV+ R CPE C + S+ + ++ H R GEK ++C
Sbjct: 77 RQRSGKEVRKRV---YVCPEP---TCVHHDPSRALGDLTGIKKHFCRKHGEKKWKC--DK 128
Query: 196 CSWRFARSDELARHRRSHSGDKPYRCVECEKRFARSDHLAKH 237
CS ++A + H ++ G + YRC +C F+R D H
Sbjct: 129 CSKKYAVQSDWKAHTKT-CGSREYRC-DCGTLFSRRDSFITH 168
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 152 YCPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHR 210
+C + G + ++CSK YA S +AH + G + YRC DC F+R D HR
Sbjct: 115 FCRKHGEKKWKCDKCSKKYAVQSDWKAHTKT-CGSREYRC---DCGTLFSRRDSFITHR 169
>10_08_0022 - 14225725-14226472,14227997-14228420,14228516-14228573
Length = 409
Score = 39.1 bits (87), Expect = 0.004
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 153 CPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRRS 212
CPE C + ++ + ++ H R GEK +RC C R+A + H +
Sbjct: 91 CPEP---TCVHHDPARALGDLTGIKKHFSRKHGEKRWRCE--RCGKRYAVHSDWKAHVK- 144
Query: 213 HSGDKPYRCVECEKRFARSDHLAKH 237
+ G + YRC +C F+R D L H
Sbjct: 145 NCGTREYRC-DCGILFSRKDSLLTH 168
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Query: 159 FRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHR 210
+RC E C K YA S +AH++ + G + YRC DC F+R D L HR
Sbjct: 124 WRC--ERCGKRYAVHSDWKAHVK-NCGTREYRC---DCGILFSRKDSLLTHR 169
>07_03_1042 +
23487326-23487443,23487555-23487957,23488057-23488397,
23488621-23489660
Length = 633
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 152 YCPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHR 210
+C + G R + C K YA + ++AH + G + YRC DC F R D HR
Sbjct: 128 FCRKHGEKRWTCQRCGKRYAVQADLKAHTKT-CGTREYRC---DCGTLFTRRDSFVTHR 182
>04_04_0823 +
28383798-28383864,28384475-28384877,28387388-28387932,
28387978-28388594
Length = 543
Score = 38.7 bits (86), Expect = 0.005
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 152 YCPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHR 210
+C + G + ++CSK YA S +AH + G + YRC DC F+R D HR
Sbjct: 111 FCRKHGEKKWKCDKCSKRYAVQSDWKAH-SKICGTREYRC---DCGTLFSRRDSFITHR 165
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 153 CPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRRS 212
CPE C + ++ + ++ H R GEK ++C CS R+A + H +
Sbjct: 87 CPEP---TCVHHDPARALGDLTGIKKHFCRKHGEKKWKC--DKCSKRYAVQSDWKAHSKI 141
Query: 213 HSGDKPYRCVECEKRFARSDHLAKH 237
G + YRC +C F+R D H
Sbjct: 142 -CGTREYRC-DCGTLFSRRDSFITH 164
>01_05_0421 + 21990034-21990392,21991691-21992681
Length = 449
Score = 37.5 bits (83), Expect = 0.011
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 153 CPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRRS 212
CPE C + S+ + ++ H R GEK ++C CS ++A + H +
Sbjct: 50 CPEAS---CVHHDPSRALGDLTGIKKHFFRKHGEKKWKC--DKCSKKYAVHSDWKAHSKI 104
Query: 213 HSGDKPYRCVECEKRFARSDHLAKH 237
G + Y+C +C F+R D H
Sbjct: 105 -CGTREYKC-DCGTIFSRRDSFITH 127
>01_07_0090 - 41003888-41004716,41005142-41005559,41007010-41007193
Length = 476
Score = 37.1 bits (82), Expect = 0.015
Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 12/95 (12%)
Query: 148 GEPKYCPEVGAFRCPVEEC-----SKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFAR 202
GEP P + CP C S+ + ++ H R GEK ++C C R+A
Sbjct: 121 GEP---PRKRVYVCPEASCVHHSPSRALGDLTGIKKHFCRKHGEKKWKC--DRCGKRYAV 175
Query: 203 SDELARHRRSHSGDKPYRCVECEKRFARSDHLAKH 237
+ H + G + Y+C +C F+R D H
Sbjct: 176 HSDWKAHSKV-CGTREYKC-DCGTVFSRRDSFVTH 208
Score = 35.1 bits (77), Expect = 0.061
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 152 YCPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHR 210
+C + G + + C K YA S +AH + G + Y+C DC F+R D HR
Sbjct: 155 FCRKHGEKKWKCDRCGKRYAVHSDWKAH-SKVCGTREYKC---DCGTVFSRRDSFVTHR 209
>02_04_0316 - 21978330-21979397
Length = 355
Score = 35.9 bits (79), Expect = 0.035
Identities = 32/105 (30%), Positives = 39/105 (37%), Gaps = 6/105 (5%)
Query: 134 RPREKATPEVK-VRFGEPKYCPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCT 192
RP + P + VRF CP G R + A R H RR K Y C
Sbjct: 178 RPGQPKPPAGREVRFS----CPYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACE 233
Query: 193 WGDCSWRFARSDELARHRRSHSGDKPYRCVECEKRFARSDHLAKH 237
RFA +L H R + +RC C F+R D L H
Sbjct: 234 RCGGKKRFAVLADLRSHLRHCGEEAQWRC-SCGTTFSRKDKLFGH 277
>02_05_0270 + 27335318-27335543,27336878-27337277,27337336-27337357
Length = 215
Score = 35.5 bits (78), Expect = 0.046
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
Query: 153 CPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRRS 212
CPE C + S+ + ++ H R GEK ++C CS R+A + H +
Sbjct: 139 CPEP---TCVHHDPSRALGDLTGIKKHFCRKHGEKKWKC--DKCSKRYAVQSDWKAHSKI 193
Query: 213 HSGDKPYRCVECEKRFAR 230
G + YRC +C F+R
Sbjct: 194 -CGTREYRC-DCGTLFSR 209
Score = 32.3 bits (70), Expect = 0.43
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 152 YCPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFAR 202
+C + G + ++CSK YA S +AH + G + YRC DC F+R
Sbjct: 163 FCRKHGEKKWKCDKCSKRYAVQSDWKAH-SKICGTREYRC---DCGTLFSR 209
>04_04_0114 + 22861300-22861476,22864952-22864969,22865187-22867163
Length = 723
Score = 32.3 bits (70), Expect = 0.43
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Query: 157 GAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFAR 202
G RC V+ CSK A + H G K RCTWG +FAR
Sbjct: 555 GGKRCKVDNCSK---SAQGSTDFCKAHGGGK--RCTWGTGCEKFAR 595
>09_02_0237 + 6141048-6141962
Length = 304
Score = 31.5 bits (68), Expect = 0.75
Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 11/102 (10%)
Query: 144 KVRFGEPKYCPEVG-AFRCPVEECSKLYAKASHVR--AHLRRHS--GEKPYRCTWGDCSW 198
K+ G YCPE G A E C + + + R A L R G + C + DC+
Sbjct: 161 KLHSGGGVYCPEDGCASAVDPELCQPILPEDNFERWCAALCRAMVLGGRHVYCPFTDCA- 219
Query: 199 RFARSDELARHRRSHSGDKPYRCVECEKRFARSDHLAKHGRV 240
+ +A R S +P C C +RF +A HG V
Sbjct: 220 -----EIIADERGGDSDGQPTECPACRRRFCERCGVAWHGGV 256
>08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413
Length = 533
Score = 31.1 bits (67), Expect = 1.00
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 166 CSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRRSHSGDKP 218
CSK YA S +AHL+ G + + C DC F+R + H+ + + +P
Sbjct: 148 CSKAYAVHSDYKAHLKT-CGTRGHTC---DCGRVFSRVESFIEHQDACNAGRP 196
Score = 28.3 bits (60), Expect = 7.0
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 23/123 (18%)
Query: 134 RPREKATPEVKVRFGEPKYCPEVGAFRCPVEECSKLYAKASHVRAHLRRH---------- 183
RP P+ +V P+ E + C + C++ + + +++ H RRH
Sbjct: 40 RPAGTPDPDAEVVSLSPRTLLESDRYVCEI--CNQGFQRDQNLQMHRRRHKVPWKLLKRE 97
Query: 184 SGEKPYR---------CTWGDCSWRFARSDELARH-RRSHSGDKPYRCVECEKRFA-RSD 232
+GE + C D S + +H RR HSG + + C C K +A SD
Sbjct: 98 AGEAARKRVFVCPEPTCLHHDPSHALGDLVGIKKHFRRKHSGHRQWACSRCSKAYAVHSD 157
Query: 233 HLA 235
+ A
Sbjct: 158 YKA 160
>10_08_0648 + 19579299-19580618
Length = 439
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 38 DSDTSDWQLSDLDFNCDGFVIGADDPNKEENNLVDDLPVFDFEDLD-KSIIDEYLLE 93
D D D + D+D N D +DD + ++++ D L ED K +++ +L++
Sbjct: 239 DDDDEDADVFDIDLNLDHETSNSDDDDDDDDDCADTLAGLGDEDYPLKCLVETHLVD 295
>01_01_1115 +
8828544-8828620,8829608-8829779,8829873-8830183,
8830934-8830983,8832349-8832405,8832742-8832761,
8834637-8835236,8835283-8836002
Length = 668
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 130 SEWPRPREKATPEVKVRFGEPKYCPEVGAFRCPVEECSKLYAKA-SH 175
S P+ R + +VK RFG+ K +VG F C +E + LYA SH
Sbjct: 115 STTPKSRVRQVKQVKDRFGKIK--KKVGNFCCSWKEANSLYASGESH 159
>09_02_0203 -
5746068-5746307,5746469-5746729,5746833-5748239,
5748588-5748714,5748800-5749119,5749202-5749963,
5750749-5750898,5751007-5751096,5751196-5751340,
5751440-5751617,5751753-5752448,5752555-5752753
Length = 1524
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 26 AESLINFELPSFDSDTSDWQLSDLDFNCDGFVIGADDPNKEENNLVDDLPVFDFEDLDKS 85
+++L +PSFD+D W D D I A++ + +NN + L + D E DK+
Sbjct: 255 SDNLYPLVMPSFDTDPHIWLPPDPVNKDDDTDIVANNDDNSDNNAAEGLSLSDGE-ADKN 313
Query: 86 IID 88
+D
Sbjct: 314 WLD 316
>03_04_0188 - 18241815-18242477
Length = 220
Score = 30.3 bits (65), Expect = 1.7
Identities = 24/92 (26%), Positives = 34/92 (36%), Gaps = 6/92 (6%)
Query: 154 PEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCS--WRFARSDELARHRR 211
PE FRC V C K +A + H H +G + + A + +
Sbjct: 68 PEELRFRCTV--CGKAFASYQALGGHKSSHRKPPSPGDHYGAAAAAQQLASAGDSKEDSA 125
Query: 212 SHSGDK--PYRCVECEKRFARSDHLAKHGRVH 241
S + P+RC C + FA L H R H
Sbjct: 126 SSAAGSTGPHRCTICRRSFATGQALGGHKRCH 157
>12_02_0128 -
13969118-13969222,13969329-13969460,13969558-13969671,
13971843-13971941,13972035-13972171,13972505-13972598,
13973248-13973355,13973442-13973537,13973673-13973845,
13974818-13975172,13975308-13975442,13975524-13975667,
13975762-13976436,13976552-13976617,13976710-13976877
Length = 866
Score = 29.9 bits (64), Expect = 2.3
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 9 HLEEALLNDQ-LLFEYSPAESLINFELPSFDSDTSDWQLSDLDFNCDGFVI-GADDP-NK 65
+L E L N+Q + E S SL+NF+ + W S DF+C V+ G P N
Sbjct: 108 NLIEGLSNEQRTIIEKSAFGSLLNFQRCAILLSFVKWIASHTDFSCSDIVVNGRSIPINP 167
Query: 66 EENNLVDDLP 75
N + +P
Sbjct: 168 NTTNFILGIP 177
>01_01_0990 + 7847066-7847478,7847713-7848679
Length = 459
Score = 29.9 bits (64), Expect = 2.3
Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 20/119 (16%)
Query: 139 ATPEVKVRFGEPKYCPEVGAFRCPVEECSKLYAKASHVRAH---------LRRHSGEKP- 188
A PE +V P+ F C + C K + + +++ H LR+ SG++P
Sbjct: 5 ADPEAEVIALSPRTLMATNRFVCEI--CGKGFQRDQNLQLHRRGHNLPWKLRQRSGKEPR 62
Query: 189 ---YRCTWGDC-----SWRFARSDELARHRRSHSGDKPYRCVECEKRFARSDHLAKHGR 239
Y C C S + +H G+K ++C +C KR+A H +
Sbjct: 63 KRVYVCPEKSCVHHNPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSK 121
>04_01_0354 - 4646826-4647314
Length = 162
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/67 (28%), Positives = 27/67 (40%), Gaps = 7/67 (10%)
Query: 175 HVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRRSHSGDKPYRCVECEKRFARSDHL 234
H HL + ++P+ C++G SW L R S Y C C + F + L
Sbjct: 9 HGHGHLHQQH-QRPWSCSFG-FSW-----PPLQRSPPPSSSSSSYTCGYCRREFRSAQAL 61
Query: 235 AKHGRVH 241
H VH
Sbjct: 62 GGHMNVH 68
>02_01_0246 +
1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/54 (27%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 80 EDLDKSIIDEYLLEALSSDL--SNDAQLSNTESIPNISSVYALETHDYTSIESE 131
+D+D ++ E + E+ SDL + A+ ++ + ++ ALET+D S+++E
Sbjct: 283 DDMDAEVLQEEIPESKESDLPETEQAEEASVDDQEALNQQPALETNDSLSVKAE 336
>09_04_0332 + 16767925-16768063,16768288-16768690,16769389-16770361
Length = 504
Score = 29.1 bits (62), Expect = 4.0
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 23/123 (18%)
Query: 134 RPREKATPEVKVRFGEPKYCPEVGAFRCPVEECSKLYAKASHVRAHLRRH---------- 183
RP P+ +V P+ E + C + C++ + + +++ H RRH
Sbjct: 41 RPAGTPDPDAEVVSLSPRTLLESDRYVCEI--CNQGFQRDQNLQMHRRRHKVPWKLLKRE 98
Query: 184 SGEKPYR---------CTWGDCSWRFARSDELARH-RRSHSGDKPYRCVECEKRFA-RSD 232
+GE + C D S + +H RR HSG + + C C K +A SD
Sbjct: 99 AGEAARKRVFVCPEPTCLHHDPSHALGDLVGIKKHFRRKHSGHRQWACARCSKAYAVHSD 158
Query: 233 HLA 235
+ A
Sbjct: 159 YKA 161
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 166 CSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHR 210
CSK YA S +AHL+ G + + C DC F+R + H+
Sbjct: 149 CSKAYAVHSDYKAHLKT-CGTRGHSC---DCGRVFSRVESFIEHQ 189
>09_02_0366 + 7941550-7942161,7942230-7942775
Length = 385
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 206 LARHRRSHSGDKPYRCVECEKRFA 229
L H R G +PY C C KRFA
Sbjct: 266 LQTHYRRKHGARPYACRRCGKRFA 289
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Query: 176 VRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRRSHSGDKPYRCVECEKRFARSDHLA 235
++ H RR G +PY C C RFA + H ++ K + CV C F L
Sbjct: 266 LQTHYRRKHGARPYACR--RCGKRFAVRGDWRTHEKNCG--KLWFCV-CGSDFKHKRSLK 320
Query: 236 KHGR 239
H R
Sbjct: 321 DHVR 324
>09_02_0025 + 3088084-3088319,3089582-3089627,3089720-3090475
Length = 345
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 130 SEWPRPREKATPEVKVRFGEPKYCPEVGAFRCPVEECSKLYA 171
S P+ R + +VK RFG K +VG F C +E + LYA
Sbjct: 126 STTPKNRARLVKQVKDRFG--KIRKKVGNFCCSWKEVNSLYA 165
>11_06_0015 +
19281918-19282043,19282263-19282365,19282514-19282581,
19282687-19282842,19282950-19283078,19283161-19283278,
19283368-19283462,19283579-19283731,19283822-19283917,
19284095-19284196
Length = 381
Score = 28.7 bits (61), Expect = 5.3
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 38 DSDTSDWQLSDLDFNCDG-FVIGADDPNKEENNLVDDLP 75
D D SD + SD D + DG V DD + +E+ +DLP
Sbjct: 134 DDDDSDDEESDFDDDFDGEGVFAVDDDDGDEDGEDEDLP 172
>05_06_0262 -
26746180-26746278,26746371-26746493,26746584-26746725,
26746824-26746921,26747012-26747108,26747215-26747322,
26747900-26748003,26748170-26748268,26748373-26748435,
26748538-26748687,26748769-26748900
Length = 404
Score = 28.7 bits (61), Expect = 5.3
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 126 TSIESEWPRPREKATPEVKVRFGEPKYCPE 155
T++E E P P + P ++ G Y PE
Sbjct: 287 TNVEIEVPVPEDSTNPNIRTSMGSAAYAPE 316
>11_06_0689 -
26294961-26294976,26295271-26295414,26295506-26295909,
26296112-26296261,26296334-26296497,26296526-26296836,
26296948-26297084,26297276-26297416,26297821-26297867,
26297977-26298072,26298168-26298249,26298332-26298472,
26298607-26298702,26298809-26298877,26298959-26299030,
26299201-26299368,26299577-26299711,26299792-26299958,
26301213-26301369
Length = 898
Score = 28.3 bits (60), Expect = 7.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 24 SPAESLINFELPSFDSDTSDW 44
+P + NFELP ++DTS W
Sbjct: 717 TPRQKKRNFELPDVENDTSSW 737
>08_02_1602 - 28148255-28149413,28151927-28152087
Length = 439
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Query: 152 YCPEVGAFRCPVEECS-KLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHR 210
+CP++ + C C K ++ S +R H +H G+ + C+ C F+R D+L H
Sbjct: 345 HCPKM--YVC--NRCGRKHFSVLSDLRTH-EKHCGDHRWLCS---CGTSFSRKDKLIGHV 396
Query: 211 RSHSGDKP 218
+G +P
Sbjct: 397 SLFAGHQP 404
>12_02_0884 -
23986393-23987486,23988213-23988314,23988561-23988642,
23989231-23989368
Length = 471
Score = 27.9 bits (59), Expect = 9.3
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 166 CSKLYAKASHVRAHLRRHSGEK 187
CSK+++ + +R H+ H GEK
Sbjct: 183 CSKVFSTSGSLREHMMMHGGEK 204
>07_03_0859 + 22054087-22055421
Length = 444
Score = 27.9 bits (59), Expect = 9.3
Identities = 23/82 (28%), Positives = 32/82 (39%)
Query: 26 AESLINFELPSFDSDTSDWQLSDLDFNCDGFVIGADDPNKEENNLVDDLPVFDFEDLDKS 85
A +++F P S W+ D+ F GA E + DD D D
Sbjct: 130 ARDVVDFACPFLPSSPDPWRRRDVLDGRVLFSRGAVGGGGEVDGQDDDPGFMDLAVCDPL 189
Query: 86 IIDEYLLEALSSDLSNDAQLSN 107
LL A+ +DL+ AQL N
Sbjct: 190 SRRYVLLPAVPADLAASAQLHN 211
>01_06_1614 - 38648495-38649706
Length = 403
Score = 27.9 bits (59), Expect = 9.3
Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 18/83 (21%)
Query: 177 RAHLRRHSGEK-PYRCTWGDCSWRFARSDELARHRRSH--------------SGDKP--- 218
RA +R++G+ PYRC++ C + L H H SG +P
Sbjct: 232 RARPKRNAGQGGPYRCSYPGCKGEYRTHQGLGGHVAGHINREKQAAAAAQGGSGARPEGN 291
Query: 219 YRCVECEKRFARSDHLAKHGRVH 241
+ C C K F+ L H R H
Sbjct: 292 HPCKTCGKEFSTGVALGGHMRKH 314
>01_06_1412 - 37140654-37141088,37141549-37142214
Length = 366
Score = 27.9 bits (59), Expect = 9.3
Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 5/94 (5%)
Query: 150 PKYCPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARH 209
P YC G ++ ++ H +R G KP+RC C+ FA + H
Sbjct: 251 PCYCCAAGCKNNVAHPRARPLKDFRTLQTHYKRKHGAKPFRCR--RCAKPFAVKGDWRTH 308
Query: 210 RRSHSGDKPYRCVECEKRFARS--DHLAKHGRVH 241
+ + G + + + + RS DH+ G H
Sbjct: 309 EK-NCGKRWFCACGSDFKHKRSLNDHVRSFGAHH 341
>01_06_0412 +
29159918-29160046,29160148-29160297,29160385-29160447,
29160540-29160716,29160796-29160899,29162142-29162249,
29162336-29162432,29162540-29162637,29162718-29162859,
29162941-29163063,29163161-29163259
Length = 429
Score = 27.9 bits (59), Expect = 9.3
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 126 TSIESEWPRPREKATPEVKVRFGEPKYCPE 155
T++E E P P + P ++ G Y PE
Sbjct: 312 TNVEIEVPVPSDATNPNIRTSMGSAAYAPE 341
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.134 0.418
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,523,150
Number of Sequences: 37544
Number of extensions: 375505
Number of successful extensions: 1031
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 928
Number of HSP's gapped (non-prelim): 121
length of query: 273
length of database: 14,793,348
effective HSP length: 81
effective length of query: 192
effective length of database: 11,752,284
effective search space: 2256438528
effective search space used: 2256438528
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 59 (27.9 bits)
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