Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001422-TA|BGIBMGA001422-PA|IPR007087|Zinc finger,
C2H2-type
(273 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 58 8e-09
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 57 1e-08
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 55 4e-08
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 54 8e-08
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 47 2e-05
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 46 4e-05
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 44 8e-05
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 44 1e-04
At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein ... 42 3e-04
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 42 6e-04
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 41 0.001
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 41 0.001
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 40 0.001
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 40 0.001
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 39 0.003
At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein ... 39 0.004
At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein ... 39 0.004
At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein ... 38 0.010
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 32 0.36
At5g20730.3 68418.m02464 auxin-responsive factor (ARF7) identica... 32 0.48
At5g20730.2 68418.m02463 auxin-responsive factor (ARF7) identica... 32 0.48
At5g20730.1 68418.m02462 auxin-responsive factor (ARF7) identica... 32 0.48
At4g21070.1 68417.m03047 BRCT domain-containing protein / zinc f... 31 0.63
At5g63680.1 68418.m07994 pyruvate kinase, putative similar to py... 31 1.1
At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 31 1.1
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 30 1.5
At1g10730.1 68414.m01223 clathrin adaptor complexes medium subun... 30 1.5
At1g51730.1 68414.m05829 RWD domain-containing protein contains ... 30 1.9
At5g41720.1 68418.m05073 F-box family protein contains Pfam PF00... 29 2.5
At4g36150.1 68417.m05145 disease resistance protein (TIR-NBS-LRR... 29 2.5
At4g03260.1 68417.m00445 leucine-rich repeat family protein cont... 29 2.5
At2g48100.2 68415.m06021 exonuclease family protein contains Pfa... 29 2.5
At2g48100.1 68415.m06020 exonuclease family protein contains Pfa... 29 2.5
At1g64900.1 68414.m07357 cytochrome P450, putative similar to cy... 29 2.5
At1g60780.1 68414.m06842 clathrin adaptor complexes medium subun... 29 2.5
At1g19220.1 68414.m02392 transcriptional factor B3 family protei... 29 2.5
At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein ... 29 4.4
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 29 4.4
At1g17690.1 68414.m02190 expressed protein 29 4.4
At2g12190.1 68415.m01316 cytochrome P450, putative 28 5.9
At2g04235.1 68415.m00411 expressed protein weak similarity to ne... 28 5.9
At1g68550.2 68414.m07832 AP2 domain-containing transcription fac... 28 5.9
At1g68550.1 68414.m07831 AP2 domain-containing transcription fac... 28 5.9
At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein ... 28 5.9
At1g03360.1 68414.m00315 exonuclease family protein similar to ... 28 5.9
At5g42490.1 68418.m05172 kinesin motor family protein contains P... 28 7.7
At5g19540.1 68418.m02327 expressed protein 28 7.7
At4g14200.1 68417.m02191 expressed protein 28 7.7
At3g44060.1 68416.m04720 F-box family protein contains F-box dom... 28 7.7
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 57.6 bits (133), Expect = 8e-09
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 161 CPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRRSHSGDKPYR 220
CP++ C K + ++ H R HS ++P +C W C F + H R H+G +PY
Sbjct: 1262 CPIKGCGKNFFSHKYLVQHQRVHSDDRPLKCPWKGCKMTFKWAWSRTEHIRVHTGARPYV 1321
Query: 221 CVE--CEKRFARSDHLAKHGR 239
C E C + F ++H R
Sbjct: 1322 CAEPDCGQTFRFVSDFSRHKR 1342
Score = 41.5 bits (93), Expect = 6e-04
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 160 RCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRR 211
+CP + C + A H+R H+G +PY C DC F + +RH+R
Sbjct: 1291 KCPWKGCKMTFKWAWSRTEHIRVHTGARPYVCAEPDCGQTFRFVSDFSRHKR 1342
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
Query: 189 YRCTWGDCSWRFARSDELARHRRSHSGDKPYRCVECEKRFARSDHLAKHGRVH 241
Y+C C+ F+ +L H+R+ K C K F +L +H RVH
Sbjct: 1237 YQCNMEGCTMSFSSEKQLMLHKRNICPIK-----GCGKNFFSHKYLVQHQRVH 1284
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 56.8 bits (131), Expect = 1e-08
Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 5/115 (4%)
Query: 129 ESEWPRPREKATPEVKVRFGEPKYCPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKP 188
E + R +EK E V EP+ E+ F C + C K + S +R H H GE+
Sbjct: 51 EDTFSRLKEKEK-EPDVPEPEPEPTTEI-LFLCSYDGCGKTFFDVSALRKHSHIH-GERQ 107
Query: 189 YRCTWGDCSWRFARSDELARHRRSHSGDKPYRCV--ECEKRFARSDHLAKHGRVH 241
Y C C +F S +L RH H+G++ Y C C K F+ +L H + H
Sbjct: 108 YVCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMKTH 162
Score = 51.2 bits (117), Expect = 7e-07
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 161 CPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRRSHSGDKPYR 220
C E C K + +S ++ H H+GE+ Y CT+ C F+ L H ++HS + +
Sbjct: 110 CDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMKTHSQENYHI 169
Query: 221 C--VECEKRFARSDHLAKH 237
C C KR+A L H
Sbjct: 170 CPYSGCVKRYAHEYKLKNH 188
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 55.2 bits (127), Expect = 4e-08
Identities = 22/62 (35%), Positives = 31/62 (50%)
Query: 160 RCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRRSHSGDKPY 219
RC E C K + ++ H R H E+P+ C+W CS F H R H+G++PY
Sbjct: 1239 RCTHEGCGKKFRAHKYLVLHQRVHKDERPFECSWKGCSMTFKWQWARTEHLRLHTGERPY 1298
Query: 220 RC 221
C
Sbjct: 1299 IC 1300
Score = 41.5 bits (93), Expect = 6e-04
Identities = 33/122 (27%), Positives = 49/122 (40%), Gaps = 14/122 (11%)
Query: 123 HDYTSIESEWP-RPREKATPEVKVRFGEPKYCPEVGAFRCPVEECSKLYAKASHVRAHLR 181
H TS E + P R K TP+ + + RC +E C + + ++ H R
Sbjct: 1178 HTETSDEEKKPIAKRLKKTPKACSGSRQQEVPTTTHPNRCYLEGCKMTFESKAKLQTHKR 1237
Query: 182 RHSGEKPYRCTWGDCSWRFARSDELARHRRSHSGDKPYRC--VECEKRF----ARSDHLA 235
RCT C +F L H+R H ++P+ C C F AR++HL
Sbjct: 1238 N-------RCTHEGCGKKFRAHKYLVLHQRVHKDERPFECSWKGCSMTFKWQWARTEHLR 1290
Query: 236 KH 237
H
Sbjct: 1291 LH 1292
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/53 (35%), Positives = 25/53 (47%)
Query: 159 FRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRR 211
F C + CS + HLR H+GE+PY C C F + +RHRR
Sbjct: 1268 FECSWKGCSMTFKWQWARTEHLRLHTGERPYICKVDGCGLSFRFVSDYSRHRR 1320
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 9/56 (16%)
Query: 188 PYRCTWGDCSWRFARSDELARHRRSHSGDKPYRCVE--CEKRFARSDHLAKHGRVH 241
P RC C F +L H+R+ RC C K+F +L H RVH
Sbjct: 1214 PNRCYLEGCKMTFESKAKLQTHKRN-------RCTHEGCGKKFRAHKYLVLHQRVH 1262
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 54.4 bits (125), Expect = 8e-08
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 164 EECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRRSHSGDKPYRCVE 223
+EC + K +H++ H++ HS E+ + C DC+ + R D L RH +H G K ++C +
Sbjct: 69 QECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTHKG-KLFKCPK 127
Query: 224 --CEKRFARSDHLAKH 237
C+ F+ ++ +H
Sbjct: 128 ENCKSEFSVQGNVGRH 143
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 157 GAFRCPVEECSKLYAKASHVRAHLRR-HSGEKPYRCTWGDCSWRFARSDELARHRRSHSG 215
G +C VE CS ++KAS+++ H++ H +P+ C + C RFA R++ +SG
Sbjct: 303 GEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRPFVCGFPGCGMRFAYKH--VRNKHENSG 360
Query: 216 DKPYRC 221
Y C
Sbjct: 361 YHVYTC 366
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 158 AFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARH-RRSHSGD 216
+F C V++C+ Y + H+ HL H G K ++C +C F+ + RH ++ HS D
Sbjct: 93 SFTCYVDDCAASYRRKDHLNRHLLTHKG-KLFKCPKENCKSEFSVQGNVGRHVKKYHSND 151
Score = 36.3 bits (80), Expect = 0.022
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 192 TWGDCSWRFARSDELARHRRSHSGDKPYRCV--ECEKRFARSDHLAKHGRVH 241
T +C F + L +H +SHS ++ + C +C + R DHL +H H
Sbjct: 67 TCQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTH 118
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 157 GAFRCPVEECSKLYAKASHVRAHLRR-HSGEKPYRCTWGDCSWRFARSDELARHRRSHSG 215
G +C VE CS ++KAS+++ H++ H +P+ C + C RFA R++ +SG
Sbjct: 215 GEIKCEVEGCSSTFSKASNLQKHMKAVHDDIRPFVCGFPGCGMRFAYKH--VRNKHENSG 272
Query: 216 DKPYRC 221
Y C
Sbjct: 273 YHVYTC 278
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 158 AFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARH-RRSHSGD 216
+F C V++C+ Y + H+ HL H G K ++C +C F+ + RH ++ HS D
Sbjct: 5 SFTCYVDDCAASYRRKDHLNRHLLTHKG-KLFKCPKENCKSEFSVQGNVGRHVKKYHSND 63
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 186 EKPYRCTWGDCSWRFARSDELARHRRSHSGDKPYRCVE--CEKRFARSDHLAKH 237
E+ + C DC+ + R D L RH +H G K ++C + C+ F+ ++ +H
Sbjct: 3 ERSFTCYVDDCAASYRRKDHLNRHLLTHKG-KLFKCPKENCKSEFSVQGNVGRH 55
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 45.6 bits (103), Expect = 4e-05
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 10/102 (9%)
Query: 136 REKATPEVKVRFGEPKYCPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGD 195
++K+T EVK + CPE C + S+ + ++ H R GEK ++C
Sbjct: 110 KQKSTKEVKRKV---YLCPEPS---CVHHDPSRALGDLTGIKKHYYRKHGEKKWKC--DK 161
Query: 196 CSWRFARSDELARHRRSHSGDKPYRCVECEKRFARSDHLAKH 237
CS R+A + H ++ G K YRC +C F+R D H
Sbjct: 162 CSKRYAVQSDWKAHSKT-CGTKEYRC-DCGTLFSRRDSFITH 201
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 44.4 bits (100), Expect = 8e-05
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 10/102 (9%)
Query: 136 REKATPEVKVRFGEPKYCPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGD 195
++K+T EVK + CPE C + S+ + ++ H R GEK ++C
Sbjct: 112 KQKSTKEVKRKV---YLCPEP---TCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCE--K 163
Query: 196 CSWRFARSDELARHRRSHSGDKPYRCVECEKRFARSDHLAKH 237
CS R+A + H ++ G K YRC +C F+R D H
Sbjct: 164 CSKRYAVQSDWKAHSKT-CGTKEYRC-DCGTIFSRRDSYITH 203
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 152 YCPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHR 210
Y + G + E+CSK YA S +AH + G K YRC DC F+R D HR
Sbjct: 150 YYRKHGEKKWKCEKCSKRYAVQSDWKAH-SKTCGTKEYRC---DCGTIFSRRDSYITHR 204
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 44.0 bits (99), Expect = 1e-04
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 136 REKATPEVKVRFGEPKYCPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGD 195
R+K+ EVK + CPEV C + S+ + ++ H R GEK ++C
Sbjct: 92 RQKSNKEVKKKV---YVCPEVS---CVHHDPSRALGDLTGIKKHFCRKHGEKKWKC--DK 143
Query: 196 CSWRFARSDELARHRRSHSGDKPYRCVECEKRFARSDHLAKH 237
CS ++A + H + G K Y+C +C F+R D H
Sbjct: 144 CSKKYAVQSDWKAHSKI-CGTKEYKC-DCGTLFSRRDSFITH 183
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 152 YCPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHR 210
+C + G + ++CSK YA S +AH + G K Y+C DC F+R D HR
Sbjct: 130 FCRKHGEKKWKCDKCSKKYAVQSDWKAH-SKICGTKEYKC---DCGTLFSRRDSFITHR 184
>At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein
similar to finger protein pcp1 GB:S48856 from [Solanum
tuberosum] contains Pfam domain, PF00096: Zinc finger,
C2H2 type
Length = 513
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 153 CPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRRS 212
CPE C + S+ + ++ H R GEK ++C CS ++A + H ++
Sbjct: 143 CPEAS---CVHHDPSRALGDLTGIKKHFCRKHGEKKWKC--DKCSKKYAVQSDCKAHSKT 197
Query: 213 HSGDKPYRCVECEKRFARSDHLAKH 237
G K YRC +C F+R D H
Sbjct: 198 -CGTKEYRC-DCGTLFSRRDSFITH 220
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 152 YCPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHR 210
+C + G + ++CSK YA S +AH + G K YRC DC F+R D HR
Sbjct: 167 FCRKHGEKKWKCDKCSKKYAVQSDCKAH-SKTCGTKEYRC---DCGTLFSRRDSFITHR 221
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 41.5 bits (93), Expect = 6e-04
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 153 CPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRRS 212
CPE G C S+ + ++ H R GEK ++C CS ++A + H ++
Sbjct: 136 CPEPG---CVHHHPSRALGDLTGIKKHFFRKHGEKKWKCE--KCSKKYAVQSDWKAHAKT 190
Query: 213 HSGDKPYRCVECEKRFARSDHLAKH 237
G K Y+C +C F+R D H
Sbjct: 191 -CGTKEYKC-DCGTLFSRRDSFITH 213
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Query: 164 EECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHR 210
E+CSK YA S +AH + G K Y+C DC F+R D HR
Sbjct: 172 EKCSKKYAVQSDWKAHAKT-CGTKEYKC---DCGTLFSRRDSFITHR 214
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 136 REKATPEVKVRFGEPKYCPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGD 195
R+++T EV+ + CP G C + S+ + ++ H R GEK ++C
Sbjct: 90 RQRSTKEVRKKV---YVCPVSG---CVHHDPSRALGDLTGIKKHFCRKHGEKKWKCE--K 141
Query: 196 CSWRFARSDELARHRRSHSGDKPYRCVECEKRFARSDHLAKH 237
CS ++A + H + G K Y+C +C F+R D H
Sbjct: 142 CSKKYAVQSDWKAHSKI-CGTKEYKC-DCGTLFSRRDSFITH 181
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 152 YCPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHR 210
+C + G + E+CSK YA S +AH + G K Y+C DC F+R D HR
Sbjct: 128 FCRKHGEKKWKCEKCSKKYAVQSDWKAH-SKICGTKEYKC---DCGTLFSRRDSFITHR 182
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 152 YCPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHR 210
+C + G + E+CSK YA S +AH + G + YRC DC F+R D HR
Sbjct: 150 FCRKHGEKKWKCEKCSKFYAVQSDWKAH-TKICGTRDYRC---DCGTLFSRKDTFITHR 204
Score = 37.1 bits (82), Expect = 0.013
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 7/85 (8%)
Query: 153 CPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRRS 212
CPE C S+ + ++ H R GEK ++C CS +A + H +
Sbjct: 126 CPETN---CAHHHPSRALGDLTGIKKHFCRKHGEKKWKCE--KCSKFYAVQSDWKAHTKI 180
Query: 213 HSGDKPYRCVECEKRFARSDHLAKH 237
G + YRC +C F+R D H
Sbjct: 181 -CGTRDYRC-DCGTLFSRKDTFITH 203
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Query: 161 CPVEEC-----SKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRRSHSG 215
CP++ C S+ + ++ H R GEK ++C CS ++A + H ++ G
Sbjct: 126 CPIKTCVHHDASRALGDLTGIKKHYSRKHGEKKWKCE--KCSKKYAVQSDWKAHAKT-CG 182
Query: 216 DKPYRCVECEKRFARSDHLAKH 237
+ Y+C +C F+R D H
Sbjct: 183 TREYKC-DCGTLFSRKDSFITH 203
Score = 37.5 bits (83), Expect = 0.010
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 152 YCPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHR 210
Y + G + E+CSK YA S +AH + G + Y+C DC F+R D HR
Sbjct: 150 YSRKHGEKKWKCEKCSKKYAVQSDWKAHAKT-CGTREYKC---DCGTLFSRKDSFITHR 204
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 153 CPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRRS 212
CPE C + ++ + ++ H R GEK ++C CS R+A + H ++
Sbjct: 125 CPEPS---CVHHDPARALGDLTGIKKHYYRKHGEKKWKC--DKCSKRYAVQSDWKAHSKT 179
Query: 213 HSGDKPYRCVECEKRFARSDHLAKH 237
G K YRC +C F+R D H
Sbjct: 180 -CGTKEYRC-DCGTIFSRRDSYITH 202
Score = 36.7 bits (81), Expect = 0.017
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 152 YCPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHR 210
Y + G + ++CSK YA S +AH + G K YRC DC F+R D HR
Sbjct: 149 YYRKHGEKKWKCDKCSKRYAVQSDWKAH-SKTCGTKEYRC---DCGTIFSRRDSYITHR 203
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 153 CPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRRS 212
CPE C + ++ + ++ H R GEK ++C CS ++A + H +
Sbjct: 112 CPEK---TCVHHDPARALGDLTGIKKHFSRKHGEKKWKC--DKCSKKYAVMSDWKAHSKI 166
Query: 213 HSGDKPYRCVECEKRFARSDHLAKH 237
G K YRC +C F+R D H
Sbjct: 167 -CGTKEYRC-DCGTLFSRKDSFITH 189
>At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 466
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 152 YCPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHR 210
+C + G + E+C+K YA S +AH + G + YRC DC F+R D HR
Sbjct: 133 FCRKHGEKKWTCEKCAKRYAVQSDWKAH-SKTCGTREYRC---DCGTIFSRRDSFITHR 187
>At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein
contains Zinc finger,C2H2 type,domain contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 506
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 152 YCPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHR 210
+C + G + E+C+K YA S +AH + G + YRC DC F+R D HR
Sbjct: 137 FCRKHGEKKWKCEKCAKRYAVQSDWKAH-SKTCGTREYRC---DCGTIFSRRDSFITHR 191
>At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 392
Score = 37.5 bits (83), Expect = 0.010
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 153 CPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRRS 212
CPE C + ++ + ++ H R GEK ++C CS ++A + H +
Sbjct: 50 CPEKS---CVHHDPARALGDLTGIKKHFSRKHGEKKWKC--DKCSKKYAVISDWKAHNKI 104
Query: 213 HSGDKPYRCVECEKRFARSDHLAKH 237
G + +RC +C F+R D H
Sbjct: 105 -CGSREFRC-DCGTLFSRKDSFISH 127
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 32.3 bits (70), Expect = 0.36
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 164 EECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHRRSHSGDKPYR 220
E CSK YA S +AHL+ G + + C DC F+R + H+ + S + +R
Sbjct: 148 ERCSKGYAVQSDYKAHLKT-CGTRGHSC---DCGRVFSRVESFIEHQDNCSARRVHR 200
Score = 31.1 bits (67), Expect = 0.83
Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 23/152 (15%)
Query: 105 LSNTESIPNISSVYALETHDYTSIESEWPRPREKATPEVKVRFGEPKYCPEVGAFRCPVE 164
+S++ S P +SS T TS + RP P+ +V P+ E + C E
Sbjct: 13 VSSSSSDPFLSSSENGVTTTNTSTQKRKRRPAGTPDPDAEVVSLSPRTLLESDRYIC--E 70
Query: 165 ECSKLYAKASHVRAHLRRHS--------------GEKPYRCTWGDCSWR---FARSD--E 205
C++ + + +++ H RRH ++ Y C C A D
Sbjct: 71 ICNQGFQRDQNLQMHRRRHKVPWKLLKRDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVG 130
Query: 206 LARH-RRSHSGDKPYRCVECEKRFA-RSDHLA 235
+ +H RR HS K + C C K +A +SD+ A
Sbjct: 131 IKKHFRRKHSNHKQWVCERCSKGYAVQSDYKA 162
>At5g20730.3 68418.m02464 auxin-responsive factor (ARF7) identical to
auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1150
Score = 31.9 bits (69), Expect = 0.48
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 38 DSDTSDWQLSDLDFNCDGFVIGADDPNKEENNLVDDLPVFDFEDLDKSIID 88
D TSDW+L +D D ++G DDP +E N V + + ++ + +D
Sbjct: 1080 DPQTSDWKLVYVDHENDILLVG-DDPWEEFVNCVQSIKILSSAEVQQMSLD 1129
>At5g20730.2 68418.m02463 auxin-responsive factor (ARF7) identical to
auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1164
Score = 31.9 bits (69), Expect = 0.48
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 38 DSDTSDWQLSDLDFNCDGFVIGADDPNKEENNLVDDLPVFDFEDLDKSIID 88
D TSDW+L +D D ++G DDP +E N V + + ++ + +D
Sbjct: 1079 DPQTSDWKLVYVDHENDILLVG-DDPWEEFVNCVQSIKILSSAEVQQMSLD 1128
>At5g20730.1 68418.m02462 auxin-responsive factor (ARF7) identical to
auxin response factor 7 GI:4104929 from [Arabidopsis
thaliana]
Length = 1165
Score = 31.9 bits (69), Expect = 0.48
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 38 DSDTSDWQLSDLDFNCDGFVIGADDPNKEENNLVDDLPVFDFEDLDKSIID 88
D TSDW+L +D D ++G DDP +E N V + + ++ + +D
Sbjct: 1080 DPQTSDWKLVYVDHENDILLVG-DDPWEEFVNCVQSIKILSSAEVQQMSLD 1129
>At4g21070.1 68417.m03047 BRCT domain-containing protein / zinc
finger (C3HC4-type RING finger) family protein (BRCA1)
contains Pfam profiles PF00533: BRCA1 C Terminus (BRCT)
domain, PF00097: Zinc finger, C3HC4 type (RING finger),
PF01535: PPR repeat; identical to cDNA BRCA1 GI:28372473
Length = 1276
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 163 VEECSKLYAKASHVRAHLRRHSGE--KPYRCTWGDCSWRFARSDELARHRR 211
+E+CS + +S AHLRR +G K + C + CS S E+ + R
Sbjct: 869 IEKCSTINKSSSGGSAHLRRCNGSLTKKFTCAFCQCSEDTEASGEMTHYYR 919
>At5g63680.1 68418.m07994 pyruvate kinase, putative similar to
pyruvate kinase, cytosolic isozyme [Glycine max]
SWISS-PROT:Q42806
Length = 510
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 18 QLLFEYSPAESLINFELPSFDSDTSDWQLSD 48
+L+ +Y PA +++ +P F SDT +W SD
Sbjct: 409 KLVAKYRPAVPILSVVVPVFTSDTFNWSCSD 439
>At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 362
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 164 EECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHR 210
E CSK YA S +AHL+ G + + C DC F+R + H+
Sbjct: 121 ERCSKGYAVQSDYKAHLKT-CGSRGHSC---DCGRVFSRVESFIEHQ 163
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 164 EECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARHR 210
E CSK YA S +AHL+ G + + C DC F+R + H+
Sbjct: 151 ERCSKGYAVQSDYKAHLKT-CGTRGHSC---DCGRVFSRVESFIEHQ 193
>At1g10730.1 68414.m01223 clathrin adaptor complexes medium subunit
family protein contains Pfam profile: PF00928 adaptor
complexes medium subunit family
Length = 428
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 126 TSIESEWPRPREKATPEVKVRFGEPKYCPEVGA 158
TS+E E P P + P+V+ G Y PE A
Sbjct: 311 TSVEIELPVPTDAYNPDVRTSLGSAAYAPEKDA 343
>At1g51730.1 68414.m05829 RWD domain-containing protein contains
Pfam profile PF05773: RWD domain; similar to GCN2
eIF2alpha kinase (GI:6066585) [Mus musculus]; similar to
GCN2beta (GI:10764163) [Mus musculus]; similar to RING
finger protein 25 (RING finger protein AO7)
(Swiss-Prot:Q9QZR0) [Mus musculus]; similar to RING
finger protein 25 (Swiss-Prot:Q96BH1) [Homo sapiens]
Length = 252
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 55 GFVIGADDPNKEENNLVDDLPVFDFEDLDKSIIDEYLLEALSS 97
G V+ AD+ ++EE+ D DFED ++ +++ YL E S
Sbjct: 203 GTVVIADEEDEEEDEEDIDFEDEDFEDDEEDMLEHYLAEKSDS 245
>At5g41720.1 68418.m05073 F-box family protein contains Pfam
PF00646: F-box domain; similar to unknown protein
(gb|AAD32901.1);
Length = 186
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 152 YCP--EVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSW 198
YCP E+ FR +EC+K + S + HL R + Y + D W
Sbjct: 17 YCPATEMAKFRLLSKECNKRSYEMSFINRHLHRTNSFLGYIFYYKDNKW 65
>At4g36150.1 68417.m05145 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1179
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 69 NLVD-DLPVFDFEDLDKSIIDEYLLEALSSDLSNDAQLSNTESIPNISSVYALETHDYTS 127
NL D +LP + E+L + D L+ + DLS+ +L N + N S+ L TS
Sbjct: 630 NLTDFNLPYSEIEELWEGAKDTQKLKWV--DLSHSRKLCNLSGLLNAESLQRLNLEGCTS 687
Query: 128 IESEWPRPREK 138
+E E PR ++
Sbjct: 688 LE-ELPREMKR 697
>At4g03260.1 68417.m00445 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 677
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Query: 72 DDLPVFDFEDLDKSI--IDEYLLEALSSDLSNDAQLSNTESIPNISSVYALETHDYTSIE 129
DDL D DKS+ DE + + D D S + N+ +++DY+S+
Sbjct: 236 DDLHALDTRQTDKSVHETDEEVKQEEDQDRDYDMHNSGDNNKENLVEDGYDDSYDYSSLA 295
Query: 130 SEWPRP 135
+W P
Sbjct: 296 KDWIVP 301
>At2g48100.2 68415.m06021 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 29.5 bits (63), Expect = 2.5
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 219 YRCVECEKRFARSDHLAKHGRV 240
+RCV C K F R +HL +H ++
Sbjct: 17 HRCVACYKMFNRREHLVEHMKI 38
>At2g48100.1 68415.m06020 exonuclease family protein contains Pfam
domain PF00929: exonuclease
Length = 344
Score = 29.5 bits (63), Expect = 2.5
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 219 YRCVECEKRFARSDHLAKHGRV 240
+RCV C K F R +HL +H ++
Sbjct: 17 HRCVACYKMFNRREHLVEHMKI 38
>At1g64900.1 68414.m07357 cytochrome P450, putative similar to
cytochrome p450 GI:438240 from [Solanum melongena]
Length = 506
Score = 29.5 bits (63), Expect = 2.5
Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 4/121 (3%)
Query: 65 KEENNLVDDLPVFDFEDLDKSIIDEYLLEALSSDLSNDAQLSNTESIPNISSVYALETHD 124
+ +V++ + ED K + Y+ L +L + + N E I N+ S + D
Sbjct: 251 RARRKIVEERKRSEQED-KKDYVQSYVDTLLDLELPEENRKLNEEDIMNLCSEFLTAGTD 309
Query: 125 YTSIESEWPRPREKATPEVKVRFGEP-KYCPEVGAFRCPVEECSKL-YAKASHVRAHLRR 182
T+ +W PE++ R E K A E+ K+ Y KA V LRR
Sbjct: 310 TTATALQWIMANLVKYPEIQERLHEEIKSVVGEEAKEVEEEDVEKMPYLKAV-VLEGLRR 368
Query: 183 H 183
H
Sbjct: 369 H 369
>At1g60780.1 68414.m06842 clathrin adaptor complexes medium subunit
family protein contains Pfam profile: PF00928 adaptor
complexes medium subunit family
Length = 428
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 126 TSIESEWPRPREKATPEVKVRFGEPKYCPEVGA 158
T++E E P P + + P V+ G Y PE A
Sbjct: 311 TNVEIELPVPTDASNPTVRTSLGSASYAPEKDA 343
>At1g19220.1 68414.m02392 transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related contains Pfam
profile: PF02309 AUX/IAA family
Length = 1086
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 38 DSDTSDWQLSDLDFNCDGFVIGADDPNKEENNLVDDLPVFDFEDLDKSIID 88
D TSDW+L D D ++G DDP +E N V ++ + ++ + +D
Sbjct: 1000 DPLTSDWKLVYTDHENDILLVG-DDPWEEFVNCVQNIKILSSVEVQQMSLD 1049
>At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 493
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 216 DKPYRCVECEKRFARSDHLAKHGRVH 241
+K + C EC KRF L H R+H
Sbjct: 76 EKKHICCECGKRFVSGKALGGHKRIH 101
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 208 RHRRSHSGDKPYRCVECEKRFARSDHLAKHGRVH 241
R + Y+C CEK F S L H R+H
Sbjct: 434 RRKLQKKSRSSYKCSICEKSFVCSQALGSHQRLH 467
>At1g17690.1 68414.m02190 expressed protein
Length = 754
Score = 28.7 bits (61), Expect = 4.4
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 61 DDPNKEENNLVDDLPVFDFEDLDKSIIDEYLLEALSSDLSNDAQLSNTESIPN 113
+D ++EEN+ DDL D ED D+ L L+ D D + E P+
Sbjct: 101 EDEDEEENSGSDDLSSTDGEDDKSQGDDQETLGGLTDDTQEDNDNQSEEEDPD 153
>At2g12190.1 68415.m01316 cytochrome P450, putative
Length = 512
Score = 28.3 bits (60), Expect = 5.9
Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Query: 80 EDLDKSIIDEYLLEALSSDLSNDAQLSNTESIPNISSVYALETHDYTSIESEWPRPREKA 139
E+ +K + Y+ L +L ++ + N + I ++ S + D T+ +W
Sbjct: 271 EEDNKVYVQSYVDTLLELELPDEKRKLNEDEIVSLCSEFLNGGTDTTATALQWIMANLVK 330
Query: 140 TPEVKVR-FGEPKYCPEVGAFRCPVEECSKL-YAKASHVRAHLRRH 183
PE++ R + E K A E+ K+ Y KA V LRRH
Sbjct: 331 NPEIQKRLYEEIKSVVGEEAKEVEEEDAQKMPYLKAV-VMEGLRRH 375
>At2g04235.1 68415.m00411 expressed protein weak similarity to
neurofilament protein (GI:161292) [Loligo pealei]; weak
similarity to Glucoamylase S1/S2 precursor (EC 3.2.1.3)
(Glucan 1,4-alpha- glucosidase) (1,4-alpha-D-glucan
glucohydrolase) (Swiss-Prot:P08640) [Saccharomyces
cerevisiae]
Length = 1226
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 92 LEALSSDLSNDAQLSNTESIPNISSVYALETHDYTSIESEWPRPREKATPE 142
LEAL S N +S +S+P+ AL TS ++ P P EK P+
Sbjct: 443 LEALLSKHDNRTPISEEKSMPDKCISGALSHAVDTSDDNRTPVPEEKGIPD 493
>At1g68550.2 68414.m07832 AP2 domain-containing transcription
factor, putative contains Pfam profile: PF00847 AP2
domain
Length = 324
Score = 28.3 bits (60), Expect = 5.9
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 14/75 (18%)
Query: 16 NDQLLFEYSPAESLINFELPSFDSDTSDWQLSDLDFNC-------DGFVIGADDPNKEEN 68
N + LF++ N ++P F + Q DLDF+C D F + DD E+
Sbjct: 227 NKETLFDFD----FTNLQIPDFGFLAEEQQ--DLDFDCFLADDQFDDFGL-LDDIQGFED 279
Query: 69 NLVDDLPVFDFEDLD 83
N LP FDF D++
Sbjct: 280 NGPSALPDFDFADVE 294
>At1g68550.1 68414.m07831 AP2 domain-containing transcription
factor, putative contains Pfam profile: PF00847 AP2
domain
Length = 324
Score = 28.3 bits (60), Expect = 5.9
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 14/75 (18%)
Query: 16 NDQLLFEYSPAESLINFELPSFDSDTSDWQLSDLDFNC-------DGFVIGADDPNKEEN 68
N + LF++ N ++P F + Q DLDF+C D F + DD E+
Sbjct: 227 NKETLFDFD----FTNLQIPDFGFLAEEQQ--DLDFDCFLADDQFDDFGL-LDDIQGFED 279
Query: 69 NLVDDLPVFDFEDLD 83
N LP FDF D++
Sbjct: 280 NGPSALPDFDFADVE 294
>At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein
contains Pfam domian PF00096: Zinc finger, C2H2 type
Length = 302
Score = 28.3 bits (60), Expect = 5.9
Identities = 25/90 (27%), Positives = 33/90 (36%), Gaps = 4/90 (4%)
Query: 150 PKYCPEVGAFRCPVEECSKLYAKASHVRAHLRRHSGEKPYRCTWGDCSWRFARSDELARH 209
P YC G SK ++ H +R G KP+RC C FA + H
Sbjct: 147 PCYCCAEGCKNNIDHPRSKPLKDFRTLQTHYKRKHGAKPFRCR-KKCEKTFAVRGDWRTH 205
Query: 210 RRSHSGDKPYRCVECEKRFARSDHLAKHGR 239
++ K + CV C F L H R
Sbjct: 206 EKNCG--KLWFCV-CGSDFKHKRSLKDHVR 232
>At1g03360.1 68414.m00315 exonuclease family protein similar to
Exosome complex exonuclease RRP4 (Ribosomal RNA
processing protein 4)(SP:P38792) {Saccharomyces
cerevisiae}
Length = 322
Score = 28.3 bits (60), Expect = 5.9
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 92 LEALSSDLSNDAQLSNTESIPNISSVYALETHDYTSIESEWPRP----REKATPEVKVRF 147
L++LSS ++DA + T+SIP L+ H + ++ E E+ V VR
Sbjct: 25 LQSLSSSANSDASVIVTDSIPVNHDDAFLKGHGTSEVDGELLATVCGVVERVDKLVYVRT 84
Query: 148 GEPKYCPEVG 157
+Y PEVG
Sbjct: 85 LRARYKPEVG 94
>At5g42490.1 68418.m05172 kinesin motor family protein contains Pfam
domain, PF00225: Kinesin motor domain
Length = 1087
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/69 (24%), Positives = 34/69 (49%)
Query: 47 SDLDFNCDGFVIGADDPNKEENNLVDDLPVFDFEDLDKSIIDEYLLEALSSDLSNDAQLS 106
S +DF+ D D + E +++++L +FE L+ S D++LL+ + S
Sbjct: 306 SSMDFDADFRRRSYDSTDLGEPSIINNLTERNFEFLENSEEDDFLLDDKTPQFSRHNLYD 365
Query: 107 NTESIPNIS 115
+ E + I+
Sbjct: 366 DWEELVQIT 374
>At5g19540.1 68418.m02327 expressed protein
Length = 462
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 30 INFELPSFDSDTSDWQLSDLDF 51
++F+L D DT +W +DLDF
Sbjct: 191 LDFQLDCLDYDTENWYHADLDF 212
>At4g14200.1 68417.m02191 expressed protein
Length = 784
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 91 LLEALSSDLSNDAQLSNTESIPNISSVYALETHDYTSIESEWPRPRE 137
L EA S L A+ + +IP +SS+ ET + + WP RE
Sbjct: 703 LSEARSPRLQQQAKDHESNNIPRVSSILGQET---SPEDGHWPEKRE 746
>At3g44060.1 68416.m04720 F-box family protein contains F-box domain
Pfam:PF00646
Length = 427
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 55 GFVIGADDPNKEENNLVD----DLPVFDFEDLDKSIIDEYLLEALSSDLSNDAQLSN-TE 109
G+++ D P+ + D + P+F + L K +D + +E + ++ NDA + N
Sbjct: 214 GYILTLDTPSVVDLYYSDSPRHNAPLFHLDSLAKVTLDLHFIENNNREVQNDADVKNLIR 273
Query: 110 SIPNISSVY 118
I N+ +++
Sbjct: 274 EICNVKTLH 282
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.317 0.134 0.418
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,953,831
Number of Sequences: 28952
Number of extensions: 314506
Number of successful extensions: 972
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 883
Number of HSP's gapped (non-prelim): 131
length of query: 273
length of database: 12,070,560
effective HSP length: 80
effective length of query: 193
effective length of database: 9,754,400
effective search space: 1882599200
effective search space used: 1882599200
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 59 (27.9 bits)
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