Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001421-TA|BGIBMGA001421-PA|undefined
         (84 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF187554-1|AAF22645.1|  558|Homo sapiens sperm antigen-36 protein.     29   1.8  
K03515-1|AAA36368.1|  558|Homo sapiens neuroleukin protein.            29   3.1  
BC006342-1|AAH06342.4|  289|Homo sapiens GPI protein protein.          29   3.1  
BC004982-1|AAH04982.1|  558|Homo sapiens glucose phosphate isome...    29   3.1  
AY324386-1|AAP72966.1|  558|Homo sapiens glucose phosphate isome...    29   3.1  
BC114918-1|AAI14919.1|  823|Homo sapiens MERTK protein protein.        27   7.1  
BC114917-1|AAI14918.1|  823|Homo sapiens MERTK protein protein.        27   7.1  
AF435011-1|AAL33548.1| 6885|Homo sapiens NUANCE protein.               27   7.1  
AF260529-1|AAG33129.1|  978|Homo sapiens MER receptor tyrosine k...    27   7.1  
AC104651-1|AAX93144.1|  432|Homo sapiens unknown protein.              27   7.1  
AB023228-1|BAA76855.3| 3541|Homo sapiens KIAA1011 protein protein.     27   7.1  
D25215-1|BAA04945.2| 1054|Homo sapiens KIAA0032 protein.               27   9.4  
AB208934-1|BAD92171.1| 1211|Homo sapiens plexin C1 variant protein.    27   9.4  

>AF187554-1|AAF22645.1|  558|Homo sapiens sperm antigen-36 protein.
          Length = 558

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 18/65 (27%), Positives = 27/65 (41%)

Query: 12  HDIPRFVVDQNGTECENPFEETRQATTKPVHVDCLISTQEQRPMENGTANVFLTSALTPS 71
           H     V  + GT  ++ F +     TK +  D LI  Q Q P+  G  +  L +     
Sbjct: 373 HQTGPIVWGEPGTNGQHAFYQLIHQGTKMIPCDFLIPVQTQHPIRKGLHHKILVANFLAQ 432

Query: 72  TLAVL 76
           T AV+
Sbjct: 433 TEAVM 437


>K03515-1|AAA36368.1|  558|Homo sapiens neuroleukin protein.
          Length = 558

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 3/73 (4%)

Query: 12  HDIPRFVVDQNGTECENPFEETRQATTKPVHVDCLISTQEQRPMENGTANVFLTSALTPS 71
           H     V  + GT  ++ F +     TK +  D LI  Q Q P+  G  +  L +     
Sbjct: 373 HQTGPIVWGEPGTNGQHAFYQLIHQGTKMIPCDFLIPVQTQHPIRKGLHHKILLANFLAQ 432

Query: 72  TLAVLVLVKGVST 84
           T A   L++G ST
Sbjct: 433 TEA---LMRGKST 442


>BC006342-1|AAH06342.4|  289|Homo sapiens GPI protein protein.
          Length = 289

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 3/73 (4%)

Query: 12  HDIPRFVVDQNGTECENPFEETRQATTKPVHVDCLISTQEQRPMENGTANVFLTSALTPS 71
           H     V  + GT  ++ F +     TK +  D LI  Q Q P+  G  +  L +     
Sbjct: 104 HQTGPIVWGEPGTNGQHAFYQLIHQGTKMIPCDFLIPVQTQHPIRKGLHHKILLANFLAQ 163

Query: 72  TLAVLVLVKGVST 84
           T A   L++G ST
Sbjct: 164 TEA---LMRGKST 173


>BC004982-1|AAH04982.1|  558|Homo sapiens glucose phosphate
           isomerase protein.
          Length = 558

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 3/73 (4%)

Query: 12  HDIPRFVVDQNGTECENPFEETRQATTKPVHVDCLISTQEQRPMENGTANVFLTSALTPS 71
           H     V  + GT  ++ F +     TK +  D LI  Q Q P+  G  +  L +     
Sbjct: 373 HQTGPIVWGEPGTNGQHAFYQLIHQGTKMIPCDFLIPVQTQHPIRKGLHHKILLANFLAQ 432

Query: 72  TLAVLVLVKGVST 84
           T A   L++G ST
Sbjct: 433 TEA---LMRGKST 442


>AY324386-1|AAP72966.1|  558|Homo sapiens glucose phosphate
           isomerase protein.
          Length = 558

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 3/73 (4%)

Query: 12  HDIPRFVVDQNGTECENPFEETRQATTKPVHVDCLISTQEQRPMENGTANVFLTSALTPS 71
           H     V  + GT  ++ F +     TK +  D LI  Q Q P+  G  +  L +     
Sbjct: 373 HQTGPIVWGEPGTNGQHAFYQLIHQGTKMIPCDFLIPVQTQHPIRKGLHHKILLANFLAQ 432

Query: 72  TLAVLVLVKGVST 84
           T A   L++G ST
Sbjct: 433 TEA---LMRGKST 442


>BC114918-1|AAI14919.1|  823|Homo sapiens MERTK protein protein.
          Length = 823

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 44  DCLISTQEQRPMENGTANVFLTSAL 68
           +C I  +E  P+ NG+  +F TSAL
Sbjct: 140 NCSIQVKEADPLSNGSVMIFNTSAL 164


>BC114917-1|AAI14918.1|  823|Homo sapiens MERTK protein protein.
          Length = 823

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 44  DCLISTQEQRPMENGTANVFLTSAL 68
           +C I  +E  P+ NG+  +F TSAL
Sbjct: 140 NCSIQVKEADPLSNGSVMIFNTSAL 164


>AF435011-1|AAL33548.1| 6885|Homo sapiens NUANCE protein.
          Length = 6885

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 12/36 (33%), Positives = 18/36 (50%)

Query: 21   QNGTECENPFEETRQATTKPVHVDCLISTQEQRPME 56
            + G EC     +T + TT P+  D L S+  Q  +E
Sbjct: 4189 EQGPECSLRPNQTEEGTTPPIEADTLDSSDAQGGLE 4224


>AF260529-1|AAG33129.1|  978|Homo sapiens MER receptor tyrosine
           kinase protein.
          Length = 978

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 44  DCLISTQEQRPMENGTANVFLTSAL 68
           +C I  +E  P+ NG+  +F TSAL
Sbjct: 295 NCSIQVKEADPLSNGSVMIFNTSAL 319


>AC104651-1|AAX93144.1|  432|Homo sapiens unknown protein.
          Length = 432

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 11/25 (44%), Positives = 16/25 (64%)

Query: 44  DCLISTQEQRPMENGTANVFLTSAL 68
           +C I  +E  P+ NG+  +F TSAL
Sbjct: 316 NCSIQVKEADPLSNGSVMIFNTSAL 340


>AB023228-1|BAA76855.3| 3541|Homo sapiens KIAA1011 protein protein.
          Length = 3541

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 12/36 (33%), Positives = 18/36 (50%)

Query: 21  QNGTECENPFEETRQATTKPVHVDCLISTQEQRPME 56
           + G EC     +T + TT P+  D L S+  Q  +E
Sbjct: 823 EQGPECSLRPNQTEEGTTPPIEADTLDSSDAQGGLE 858


>D25215-1|BAA04945.2| 1054|Homo sapiens KIAA0032 protein.
          Length = 1054

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 1/65 (1%)

Query: 6   FLNDSGHDIPRFVVDQNGTECENPFEETRQATTKPVHVDCLISTQEQRPMENGTANVFLT 65
           FL+ +G      ++    T C  PF    QA TK +  D  +  Q      N   NVF+ 
Sbjct: 635 FLHQAGMKARPSIIQDTVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGAN-LQNVFML 693

Query: 66  SALTP 70
             L P
Sbjct: 694 LTLEP 698


>AB208934-1|BAD92171.1| 1211|Homo sapiens plexin C1 variant protein.
          Length = 1211

 Score = 27.1 bits (57), Expect = 9.4
 Identities = 16/56 (28%), Positives = 26/56 (46%)

Query: 29  PFEETRQATTKPVHVDCLISTQEQRPMENGTANVFLTSALTPSTLAVLVLVKGVST 84
           P E     T + + V  + S + QR    G +NV +T A       + +++KG ST
Sbjct: 290 PKENKGNRTNQALQVFYIKSIEPQRVSTLGKSNVIVTGANFTRASNITMILKGTST 345


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.316    0.130    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,661,336
Number of Sequences: 224733
Number of extensions: 375101
Number of successful extensions: 678
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 666
Number of HSP's gapped (non-prelim): 13
length of query: 84
length of database: 73,234,838
effective HSP length: 62
effective length of query: 22
effective length of database: 59,301,392
effective search space: 1304630624
effective search space used: 1304630624
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 57 (27.1 bits)