Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001421-TA|BGIBMGA001421-PA|undefined
         (84 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    21   2.1  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   2.8  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    20   4.9  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    19   8.5  

>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
          protein protein.
          Length = 166

 Score = 21.0 bits (42), Expect = 2.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)

Query: 54 PMENGTANVFLTSALTPSTL 73
          P  + + +  + +ALTPSTL
Sbjct: 4  PFLSSSVSTVIVTALTPSTL 23


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 2.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 49  TQEQRPMENGTANVFLTSALTP 70
           TQ+Q+   NG A+   TS+  P
Sbjct: 122 TQQQQQHNNGYASPMSTSSYDP 143


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
          receptor protein.
          Length = 399

 Score = 19.8 bits (39), Expect = 4.9
 Identities = 10/27 (37%), Positives = 12/27 (44%)

Query: 7  LNDSGHDIPRFVVDQNGTECENPFEET 33
          +N SG        D + T C  P EET
Sbjct: 1  MNSSGESGGTMTEDYDMTGCGPPEEET 27


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 19.0 bits (37), Expect = 8.5
 Identities = 9/17 (52%), Positives = 12/17 (70%)

Query: 67  ALTPSTLAVLVLVKGVS 83
           AL PS++ V+ L  GVS
Sbjct: 221 ALYPSSVQVIALGVGVS 237


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.130    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,718
Number of Sequences: 429
Number of extensions: 784
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 84
length of database: 140,377
effective HSP length: 47
effective length of query: 37
effective length of database: 120,214
effective search space:  4447918
effective search space used:  4447918
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.8 bits)
S2: 37 (19.0 bits)