GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001421-TA|BGIBMGA001421-PA|undefined
         (84 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8WP35 Cluster: Poly-ankyrin; n=1; Geodia cydonium|Rep:...    31   3.5  
UniRef50_Q5UZ11 Cluster: Aminopeptidase; n=2; cellular organisms...    31   3.5  
UniRef50_Q4SGE1 Cluster: Chromosome 17 SCAF14597, whole genome s...    31   4.6  
UniRef50_A5FMD2 Cluster: Two component regulator three Y domain ...    31   6.1  
UniRef50_Q97BH5 Cluster: TVG0468499 protein; n=4; Thermoplasmata...    30   8.0  

>UniRef50_Q8WP35 Cluster: Poly-ankyrin; n=1; Geodia cydonium|Rep:
           Poly-ankyrin - Geodia cydonium (Sponge)
          Length = 861

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 5/38 (13%)

Query: 10  SGH-DIPRFVVDQNGTECENPFEETRQATTKPVHVDCL 46
           +GH D+ +++V     EC  P E   Q  TKP+HV CL
Sbjct: 355 NGHIDVAKYLV----MECNLPIEPIAQDGTKPIHVACL 388


>UniRef50_Q5UZ11 Cluster: Aminopeptidase; n=2; cellular
           organisms|Rep: Aminopeptidase - Haloarcula marismortui
           (Halobacterium marismortui)
          Length = 363

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 1/71 (1%)

Query: 4   HDFLNDSGHDIPRFVVDQNGTECENPFEETRQATTKPVHVDCLISTQEQRPMENGTANVF 63
           H+F  D G + P  V D+ G      +   R     P H++ L    +      G+ NV 
Sbjct: 41  HEFAADRGAN-PLVVQDRLGERFRRAYLRNRDEFETPSHIEALYEEMDAYIAIKGSDNVT 99

Query: 64  LTSALTPSTLA 74
            TS + P T A
Sbjct: 100 ETSDVDPETTA 110


>UniRef50_Q4SGE1 Cluster: Chromosome 17 SCAF14597, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 17
           SCAF14597, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 623

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)

Query: 9   DSGHDIPRFVVDQNGTECEN--PFEETRQATTKPVHVDCLISTQEQR 53
           DS   I    +DQ G+ C N  P  +  Q  T PVH++   +++ QR
Sbjct: 443 DSVERISNTQLDQGGSSCTNRRPVGDRAQTCTAPVHIEAGATSRAQR 489


>UniRef50_A5FMD2 Cluster: Two component regulator three Y domain
            protein precursor; n=1; Flavobacterium johnsoniae
            UW101|Rep: Two component regulator three Y domain protein
            precursor - Flavobacterium johnsoniae UW101
          Length = 2491

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 6    FLNDSGHDIPRFVVDQNGTECENPFEETRQATTKPVHVDCLISTQEQRPMENGTANVFLT 65
            +L+   +++   V D NG  C+N F  T  AT KP  V+ +   +   P+ +   N   +
Sbjct: 1780 YLDPGNYNVKLIVTDANG--CKNTFRTTVTATVKPPCVNVVGEIKTANPIISTNENTTFS 1837

Query: 66   SALTPSTL 73
               T + L
Sbjct: 1838 FETTATIL 1845


>UniRef50_Q97BH5 Cluster: TVG0468499 protein; n=4;
          Thermoplasmatales|Rep: TVG0468499 protein -
          Thermoplasma volcanium
          Length = 100

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 3/60 (5%)

Query: 26 CENPFEETRQAT-TKP--VHVDCLISTQEQRPMENGTANVFLTSALTPSTLAVLVLVKGV 82
          CE P +   + T TK   VH DC I+ +  +  E    N+ + S L  S L  LV V GV
Sbjct: 9  CEKPVKTGEKFTFTKKGSVHYDCFIADKRNKLGEEKLENLRVLSILLDSNLQNLVNVLGV 68


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.316    0.130    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,826,648
Number of Sequences: 1657284
Number of extensions: 2965736
Number of successful extensions: 6044
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 6044
Number of HSP's gapped (non-prelim): 5
length of query: 84
length of database: 575,637,011
effective HSP length: 62
effective length of query: 22
effective length of database: 472,885,403
effective search space: 10403478866
effective search space used: 10403478866
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 65 (30.3 bits)