GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001421-TA|BGIBMGA001421-PA|undefined
         (84 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    25   0.48 
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    22   2.6  
AY146758-1|AAO12073.1|  289|Anopheles gambiae odorant-binding pr...    21   4.5  
AJ618930-1|CAF02010.2|  273|Anopheles gambiae odorant-binding pr...    21   4.5  
AF393485-1|AAL60410.1|  289|Anopheles gambiae odorant binding pr...    21   4.5  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    21   5.9  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           21   7.8  

>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 24.6 bits (51), Expect = 0.48
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 2   HAHDFLNDSGHDIPRFVVDQNGTECENP 29
           +AHD L D  H IP   +  +G++  +P
Sbjct: 146 NAHDHLADGLHSIPSPPITVSGSDMSSP 173


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 14/46 (30%), Positives = 19/46 (41%)

Query: 10   SGHDIPRFVVDQNGTECENPFEETRQATTKPVHVDCLISTQEQRPM 55
            +GH I R   DQ G + E   E + + T   + V       E R M
Sbjct: 1051 NGHLILRTTNDQEGNDMEREVETSDEFTGIGIRVSFTQVDAEMREM 1096


>AY146758-1|AAO12073.1|  289|Anopheles gambiae odorant-binding
           protein AgamOBP30 protein.
          Length = 289

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 11/35 (31%), Positives = 15/35 (42%)

Query: 11  GHDIPRFVVDQNGTECENPFEETRQATTKPVHVDC 45
           G ++ R  V  N    E  F ET  A  + +  DC
Sbjct: 228 GPNLDRIYVQCNNYANETVFRETTDACYQRLRSDC 262


>AJ618930-1|CAF02010.2|  273|Anopheles gambiae odorant-binding
           protein OBPjj83c protein.
          Length = 273

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 11/35 (31%), Positives = 15/35 (42%)

Query: 11  GHDIPRFVVDQNGTECENPFEETRQATTKPVHVDC 45
           G ++ R  V  N    E  F ET  A  + +  DC
Sbjct: 212 GPNLDRIYVQCNNYANETVFRETTDACYQRLRSDC 246


>AF393485-1|AAL60410.1|  289|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 289

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 11/35 (31%), Positives = 15/35 (42%)

Query: 11  GHDIPRFVVDQNGTECENPFEETRQATTKPVHVDC 45
           G ++ R  V  N    E  F ET  A  + +  DC
Sbjct: 228 GPNLDRIYVQCNNYANETVFRETTDACYQRLRSDC 262


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 9/21 (42%), Positives = 16/21 (76%)

Query: 63  FLTSALTPSTLAVLVLVKGVS 83
           F+  A +  TLA+LV+++G+S
Sbjct: 788 FVFGAWSLFTLAILVMMEGLS 808


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)

Query: 37  TTKPVHVDCLISTQEQRPMEN 57
           T + + VD L+ +   RP EN
Sbjct: 81  TARQMEVDVLVLSHTYRPPEN 101


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.130    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,298
Number of Sequences: 2123
Number of extensions: 2895
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 84
length of database: 516,269
effective HSP length: 53
effective length of query: 31
effective length of database: 403,750
effective search space: 12516250
effective search space used: 12516250
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 41 (20.6 bits)