Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001421-TA|BGIBMGA001421-PA|undefined
(84 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83104-2|CAB54203.1| 563|Caenorhabditis elegans Hypothetical pr... 28 0.94
Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical pr... 28 0.94
Z81041-1|CAB02786.2| 362|Caenorhabditis elegans Hypothetical pr... 27 1.6
AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical ... 27 2.2
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 26 2.9
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 26 2.9
Z75539-2|CAA99844.2| 555|Caenorhabditis elegans Hypothetical pr... 26 3.8
U32326-1|AAC46965.1| 555|Caenorhabditis elegans G protein signa... 26 3.8
AL132865-14|CAB60610.1| 363|Caenorhabditis elegans Hypothetical... 26 3.8
Z83216-4|CAB62781.1| 314|Caenorhabditis elegans Hypothetical pr... 25 6.6
Z81116-9|CAB03296.2| 466|Caenorhabditis elegans Hypothetical pr... 25 6.6
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 25 6.6
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 25 6.6
AL132865-13|CAB60609.1| 496|Caenorhabditis elegans Hypothetical... 25 6.6
AC084152-2|AAM69073.2| 1571|Caenorhabditis elegans Hypothetical ... 25 6.6
AC024843-9|AAF60836.1| 263|Caenorhabditis elegans Hypothetical ... 25 6.6
Z81546-10|CAH10812.1| 674|Caenorhabditis elegans Hypothetical p... 25 8.7
U43375-5|AAA83622.1| 1035|Caenorhabditis elegans Hypothetical pr... 25 8.7
AF024499-2|AAT48621.1| 576|Caenorhabditis elegans Hypothetical ... 25 8.7
AF024499-1|AAT48620.1| 941|Caenorhabditis elegans Hypothetical ... 25 8.7
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 25 8.7
>Z83104-2|CAB54203.1| 563|Caenorhabditis elegans Hypothetical
protein F09B12.1b protein.
Length = 563
Score = 27.9 bits (59), Expect = 0.94
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
Query: 3 AHDFLNDSGH----DIPRFVVDQNGTECENPFEE 32
A +F+ D G D D+NG+EC+N FEE
Sbjct: 236 ASNFIGDQGDVAILDDIEVSYDRNGSECQNEFEE 269
>Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical
protein F09B12.1a protein.
Length = 573
Score = 27.9 bits (59), Expect = 0.94
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 4/34 (11%)
Query: 3 AHDFLNDSGH----DIPRFVVDQNGTECENPFEE 32
A +F+ D G D D+NG+EC+N FEE
Sbjct: 246 ASNFIGDQGDVAILDDIEVSYDRNGSECQNEFEE 279
>Z81041-1|CAB02786.2| 362|Caenorhabditis elegans Hypothetical
protein C27A7.2 protein.
Length = 362
Score = 27.1 bits (57), Expect = 1.6
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 13 DIPRFVVDQNGTECENPFEETRQATTKPVHVDCL 46
++ + ++ NGT+ E PF+ R + KPV V C+
Sbjct: 79 NLTKLELESNGTKVEIPFKMARYSAPKPV-VICI 111
>AL021474-3|CAD54163.1| 519|Caenorhabditis elegans Hypothetical
protein Y32F6A.4 protein.
Length = 519
Score = 26.6 bits (56), Expect = 2.2
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 30 FEETRQATTKPVHVDCLISTQEQRPMENGTAN 61
F + TT ++ C +S + +P +NGTA+
Sbjct: 460 FSAIVELTTTQFNMPCYVSVFQHKPADNGTAS 491
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 26.2 bits (55), Expect = 2.9
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 29 PFEETRQATTKPVHVD-CLISTQEQRPMENGTANVFLTSALTPSTLAVLVLVKGVST 84
P E R A K + +D ++ P+E +F+ S TLA L+ GVST
Sbjct: 973 PRTEKRDAIYKLLGIDENTVTLLPDAPIEKQKTLIFVNSVKFCDTLAALISSAGVST 1029
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 26.2 bits (55), Expect = 2.9
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 29 PFEETRQATTKPVHVD-CLISTQEQRPMENGTANVFLTSALTPSTLAVLVLVKGVST 84
P E R A K + +D ++ P+E +F+ S TLA L+ GVST
Sbjct: 973 PRTEKRDAIYKLLGIDENTVTLLPDAPIEKQKTLIFVNSVKFCDTLAALISSAGVST 1029
>Z75539-2|CAA99844.2| 555|Caenorhabditis elegans Hypothetical
protein F28C1.2 protein.
Length = 555
Score = 25.8 bits (54), Expect = 3.8
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 24 TECENPFEETRQATTKPVHVDCLISTQEQRPMEN 57
TE N F +T AT+ PV+VDC + + ++N
Sbjct: 470 TEIYNEFIDTNAATS-PVNVDCKVMEVTEDNLKN 502
>U32326-1|AAC46965.1| 555|Caenorhabditis elegans G protein
signaling regulator protein.
Length = 555
Score = 25.8 bits (54), Expect = 3.8
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 24 TECENPFEETRQATTKPVHVDCLISTQEQRPMEN 57
TE N F +T AT+ PV+VDC + + ++N
Sbjct: 470 TEIYNEFIDTNAATS-PVNVDCKVMEVTEDNLKN 502
>AL132865-14|CAB60610.1| 363|Caenorhabditis elegans Hypothetical
protein Y62E10A.17 protein.
Length = 363
Score = 25.8 bits (54), Expect = 3.8
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 3 AHDFLNDSGHDIPRFVVDQNGTECENPFEETRQATTKPV 41
AH+ L D D+ + D++ TEC + E + P+
Sbjct: 258 AHEALADEDADLDALMNDKDFTECMSALESVFTSVVPPI 296
>Z83216-4|CAB62781.1| 314|Caenorhabditis elegans Hypothetical
protein C08F11.5 protein.
Length = 314
Score = 25.0 bits (52), Expect = 6.6
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 5 DFLNDSGHDIPRFVVDQNGTECENPFEETRQATTKPVHVDCLISTQEQRPMENGT 59
D +N + R ++ + F++T + K VH DCL+ + + + NG+
Sbjct: 50 DVINREDFGVKRLSLEVSTKSSILSFDDT-EVEYKNVHGDCLVKSGNREKIVNGS 103
>Z81116-9|CAB03296.2| 466|Caenorhabditis elegans Hypothetical
protein T06C12.10 protein.
Length = 466
Score = 25.0 bits (52), Expect = 6.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 57 NGTANVFLTSALTPSTLAVLVLVKGVST 84
N N+F + A TPS+L + ++ VST
Sbjct: 5 NEVVNLFASQATTPSSLDAVTTLETVST 32
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical protein
W06A7.3c protein.
Length = 2484
Score = 25.0 bits (52), Expect = 6.6
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 31 EETRQATTKPVHVDCLISTQEQRPMENGTANVFLTSALTPSTLA 74
EE ++ + + I TQ Q+P E T ++ S L+P+TLA
Sbjct: 1672 EEQQKELVESLERPLTIITQ-QKPPEKPTEDIGALSPLSPNTLA 1714
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical protein
W06A7.3a protein.
Length = 2607
Score = 25.0 bits (52), Expect = 6.6
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 31 EETRQATTKPVHVDCLISTQEQRPMENGTANVFLTSALTPSTLA 74
EE ++ + + I TQ Q+P E T ++ S L+P+TLA
Sbjct: 1672 EEQQKELVESLERPLTIITQ-QKPPEKPTEDIGALSPLSPNTLA 1714
>AL132865-13|CAB60609.1| 496|Caenorhabditis elegans Hypothetical
protein Y62E10A.16 protein.
Length = 496
Score = 25.0 bits (52), Expect = 6.6
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 4 HDFLNDSGHDIPRFVVDQNGTECENPFEE 32
H + +GH + +++ DQN T+ E+ EE
Sbjct: 456 HQPICSTGHYVNKYLDDQNSTDDEDDEEE 484
>AC084152-2|AAM69073.2| 1571|Caenorhabditis elegans Hypothetical
protein Y102A11A.3 protein.
Length = 1571
Score = 25.0 bits (52), Expect = 6.6
Identities = 11/51 (21%), Positives = 24/51 (47%)
Query: 26 CENPFEETRQATTKPVHVDCLISTQEQRPMENGTANVFLTSALTPSTLAVL 76
C+N + T +++ + + + T P E ++ L S+ +T +VL
Sbjct: 1473 CQNIIDLTPESSDSSICAEVFVPTNSTPPSETSPTDISLNSSEQQNTSSVL 1523
>AC024843-9|AAF60836.1| 263|Caenorhabditis elegans Hypothetical
protein Y61A9LA.9 protein.
Length = 263
Score = 25.0 bits (52), Expect = 6.6
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Query: 5 DFLNDSGHDIPRFVVDQNGTECENPFEETRQATTKPVHVDCLISTQEQRPMENGTANVFL 64
DF SG +P D +GT ++ + +P ++ L + E+ EN + F
Sbjct: 18 DFFAFSGPYLPE---DAHGTSSPPEKQQQTRKRGRPTALELLTTRVEELEKENSSLRTFR 74
Query: 65 TSA 67
T+A
Sbjct: 75 TAA 77
>Z81546-10|CAH10812.1| 674|Caenorhabditis elegans Hypothetical
protein F53A2.8c protein.
Length = 674
Score = 24.6 bits (51), Expect = 8.7
Identities = 11/32 (34%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 26 CENPFEETRQATTKPVHVDCLISTQEQRPMEN 57
C++ +E T Q KPV+V L++ + + P+E+
Sbjct: 90 CQDLYE-TLQRAAKPVNVTELLAFENREPVED 120
>U43375-5|AAA83622.1| 1035|Caenorhabditis elegans Hypothetical
protein K09C4.10 protein.
Length = 1035
Score = 24.6 bits (51), Expect = 8.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 10 SGHDIPRFVVDQNGTECENPFEETRQATTKP 40
S H++P D+ G +N E+R A T P
Sbjct: 802 SAHELPSLDDDREGRLSDNNNRESRSAPTYP 832
>AF024499-2|AAT48621.1| 576|Caenorhabditis elegans Hypothetical
protein F42G2.4b protein.
Length = 576
Score = 24.6 bits (51), Expect = 8.7
Identities = 13/35 (37%), Positives = 15/35 (42%)
Query: 12 HDIPRFVVDQNGTECENPFEETRQATTKPVHVDCL 46
H I + N EN F E T KPVH+ L
Sbjct: 120 HAITELSLYNNRDILENSFFEEALRTNKPVHIKSL 154
>AF024499-1|AAT48620.1| 941|Caenorhabditis elegans Hypothetical
protein F42G2.4a protein.
Length = 941
Score = 24.6 bits (51), Expect = 8.7
Identities = 13/35 (37%), Positives = 15/35 (42%)
Query: 12 HDIPRFVVDQNGTECENPFEETRQATTKPVHVDCL 46
H I + N EN F E T KPVH+ L
Sbjct: 120 HAITELSLYNNRDILENSFFEEALRTNKPVHIKSL 154
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 24.6 bits (51), Expect = 8.7
Identities = 15/66 (22%), Positives = 29/66 (43%)
Query: 13 DIPRFVVDQNGTECENPFEETRQATTKPVHVDCLISTQEQRPMENGTANVFLTSALTPST 72
D+ RF + E EE Q ++ V L++ ++P E + + LT +
Sbjct: 1166 DVKRFTFAGSSDEEHQEAEEEEQEESRKVDERALLNATPEKPTEREGEVLKAPAQLTYAQ 1225
Query: 73 LAVLVL 78
A+++L
Sbjct: 1226 KALMIL 1231
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.316 0.130 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,116,708
Number of Sequences: 27539
Number of extensions: 75807
Number of successful extensions: 181
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 169
Number of HSP's gapped (non-prelim): 21
length of query: 84
length of database: 12,573,161
effective HSP length: 63
effective length of query: 21
effective length of database: 10,838,204
effective search space: 227602284
effective search space used: 227602284
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 51 (24.6 bits)
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