GeneModel BLAST Result against nematostella

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001420-TA|BGIBMGA001420-PA|undefined
         (77 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_23490| Best HMM Match : DDE (HMM E-Value=2.1e-33)                   29   0.70 
SB_41383| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   3.7  
SB_54653| Best HMM Match : Peptidase_M24 (HMM E-Value=0.93)            26   3.7  
SB_25063| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   4.9  
SB_57159| Best HMM Match : PI-PLC-X (HMM E-Value=0)                    25   6.5  
SB_32614| Best HMM Match : UPF0149 (HMM E-Value=6.1)                   25   6.5  
SB_30977| Best HMM Match : UPF0149 (HMM E-Value=6.1)                   25   6.5  

>SB_23490| Best HMM Match : DDE (HMM E-Value=2.1e-33)
          Length = 497

 Score = 28.7 bits (61), Expect = 0.70
 Identities = 20/56 (35%), Positives = 28/56 (50%)

Query: 17  ALSSEQPEKTTNNFKKPGILDFLHSRKRDIPNATAAAVNIVRMYIETEAARVNYTE 72
           A+   +PE  TN F   G    L +  R + +A  AA   ++  IET AA +N TE
Sbjct: 342 AVRQIKPETVTNCFTHAGYPRSLLTDDRVVQDAQNAAEPDLQHLIETVAAGLNITE 397


>SB_41383| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1995

 Score = 26.2 bits (55), Expect = 3.7
 Identities = 19/56 (33%), Positives = 26/56 (46%)

Query: 17  ALSSEQPEKTTNNFKKPGILDFLHSRKRDIPNATAAAVNIVRMYIETEAARVNYTE 72
           A+   +PE  TN F   G    L +  R +  A  AA   ++  IET A  +N TE
Sbjct: 333 AVRQIKPETVTNCFTHAGYPRSLLTDDRLVQGAQNAAEPDLQHLIETVATGLNITE 388


>SB_54653| Best HMM Match : Peptidase_M24 (HMM E-Value=0.93)
          Length = 1104

 Score = 26.2 bits (55), Expect = 3.7
 Identities = 13/32 (40%), Positives = 16/32 (50%)

Query: 22   QPEKTTNNFKKPGILDFLHSRKRDIPNATAAA 53
            Q E+    F+ PG +   H  K  IPNAT  A
Sbjct: 1045 QLEEVKTEFRGPGGVKLSHLMKGQIPNATFQA 1076


>SB_25063| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1203

 Score = 25.8 bits (54), Expect = 4.9
 Identities = 16/48 (33%), Positives = 20/48 (41%)

Query: 30  FKKPGILDFLHSRKRDIPNATAAAVNIVRMYIETEAARVNYTEIAGTC 77
           F+ P  L   H RK    +AT      VR Y+ET+  R N       C
Sbjct: 310 FENPCSLGSYHPRKTHGSSATQTDYVHVRDYLETKICRENACPAGPIC 357


>SB_57159| Best HMM Match : PI-PLC-X (HMM E-Value=0)
          Length = 1289

 Score = 25.4 bits (53), Expect = 6.5
 Identities = 13/36 (36%), Positives = 18/36 (50%)

Query: 10  LEEFSTLALSSEQPEKTTNNFKKPGILDFLHSRKRD 45
           LEEFS   L+S      + N K+  I+D     K+D
Sbjct: 394 LEEFSEFELNSTASNSESENVKETAIIDDDIEEKKD 429


>SB_32614| Best HMM Match : UPF0149 (HMM E-Value=6.1)
          Length = 175

 Score = 25.4 bits (53), Expect = 6.5
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 13  FSTLALSSEQPEKTTNNFKKPGI 35
           FS     +EQP+K T   KKPG+
Sbjct: 134 FSYFPKLAEQPQKKTKKPKKPGL 156


>SB_30977| Best HMM Match : UPF0149 (HMM E-Value=6.1)
          Length = 166

 Score = 25.4 bits (53), Expect = 6.5
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 13  FSTLALSSEQPEKTTNNFKKPGI 35
           FS     +EQP+K T   KKPG+
Sbjct: 134 FSYFPKLAEQPQKKTKKPKKPGL 156


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.316    0.130    0.360 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,247,188
Number of Sequences: 59808
Number of extensions: 68659
Number of successful extensions: 170
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 163
Number of HSP's gapped (non-prelim): 7
length of query: 77
length of database: 16,821,457
effective HSP length: 55
effective length of query: 22
effective length of database: 13,532,017
effective search space: 297704374
effective search space used: 297704374
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 52 (25.0 bits)