GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001420-TA|BGIBMGA001420-PA|undefined
         (77 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    24   0.51 
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            21   3.6  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            21   3.6  
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    20   8.4  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    20   8.4  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    20   8.4  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 24.2 bits (50), Expect = 0.51
 Identities = 15/61 (24%), Positives = 27/61 (44%)

Query: 1    MVHRELGNLLEEFSTLALSSEQPEKTTNNFKKPGILDFLHSRKRDIPNATAAAVNIVRMY 60
            +V ++  ++LE    L L     EK    FK+  +LD   S           +VNI+ ++
Sbjct: 1676 LVDQKNNSVLEVHQVLQLLDTHVEKLDRLFKEFNVLDTQASELVQTAEMDELSVNIIWLF 1735

Query: 61   I 61
            +
Sbjct: 1736 V 1736


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 8   NLLEEFSTLALSSEQPEKTTNNFKKPGILDFL 39
           NL++  S+L    + PE+   +FKK   +D L
Sbjct: 888 NLIKSSSSLFDRFDHPEEIMRDFKKGVQMDAL 919


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 8   NLLEEFSTLALSSEQPEKTTNNFKKPGILDFL 39
           NL++  S+L    + PE+   +FKK   +D L
Sbjct: 889 NLIKSSSSLFDRFDHPEEIMRDFKKGVQMDAL 920


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query: 54  VNIVRMYIETEAARVNYTEI 73
           +NI  MYI T+   V Y ++
Sbjct: 344 MNINHMYIATDGQEVFYAKL 363


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
          isoform 1 protein.
          Length = 515

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 9/22 (40%), Positives = 11/22 (50%)

Query: 3  HRELGNLLEEFSTLALSSEQPE 24
          H  LG +  EF  LA   + PE
Sbjct: 25 HSFLGLIFMEFEQLATEMQAPE 46


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 44  RDIPNATAAAVNIVRMYIETEAARVNY 70
           R +PN    + N+ R+   T  A+V Y
Sbjct: 742 RMMPNKAGPSSNVRRVIALTVVAKVRY 768


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.130    0.360 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,694
Number of Sequences: 2123
Number of extensions: 2393
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 77
length of database: 516,269
effective HSP length: 52
effective length of query: 25
effective length of database: 405,873
effective search space: 10146825
effective search space used: 10146825
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
S2: 40 (20.2 bits)