Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001420-TA|BGIBMGA001420-PA|undefined
(77 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81583-2|CAB04670.1| 314|Caenorhabditis elegans Hypothetical pr... 28 0.69
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p... 27 1.6
AF166167-1|AAD49856.1| 732|Caenorhabditis elegans adducin-relat... 27 1.6
AF039043-5|AAK70639.1| 732|Caenorhabditis elegans Adducin prote... 27 1.6
AF039043-3|AAM54181.1| 682|Caenorhabditis elegans Adducin prote... 27 1.6
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 26 3.7
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 26 3.7
AF125956-4|AAD14723.1| 353|Caenorhabditis elegans Serpentine re... 25 4.8
AF098992-7|AAC67455.2| 224|Caenorhabditis elegans Hypothetical ... 25 4.8
AF014940-2|AAB63934.1| 232|Caenorhabditis elegans Hypothetical ... 25 4.8
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 25 6.4
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 25 6.4
Z71258-2|CAA95781.2| 668|Caenorhabditis elegans Hypothetical pr... 25 8.4
AF025450-1|AAB70937.1| 321|Caenorhabditis elegans Hypothetical ... 25 8.4
AC006673-3|AAF39929.1| 861|Caenorhabditis elegans Hypothetical ... 25 8.4
>Z81583-2|CAB04670.1| 314|Caenorhabditis elegans Hypothetical
protein T02G6.2 protein.
Length = 314
Score = 28.3 bits (60), Expect = 0.69
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 12 EFSTLALSSEQPEKTTNNFKKPGILDFLHSRKRDIPNATAAAVNIVR 58
+ T+ S+ P K T +KK L+ S+KR P+ + A + +VR
Sbjct: 219 QMMTVRAGSQPPGKVTYQYKKREQLETWKSKKR-APSTSGAVITMVR 264
>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
protein C34D4.14 protein.
Length = 2761
Score = 27.1 bits (57), Expect = 1.6
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Query: 3 HRELGNLLEEFSTLALSSEQPEKTTNNFKKPGILDFLHSRKRDIPN 48
H ++ N+LE S + E P+ + K+PG S K ++PN
Sbjct: 492 HNQVANILESPSAFMRNKEDPKVKASTSKQPGT-----STKPELPN 532
>AF166167-1|AAD49856.1| 732|Caenorhabditis elegans adducin-related
protein protein.
Length = 732
Score = 27.1 bits (57), Expect = 1.6
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 7 GNLLEEFSTLALSSEQPEKTTNNFKKPGILDFLHSRKRD 45
GN T A E+P K KK G L F+ RK+D
Sbjct: 695 GNTTSRSCTTASEEEKPTKDEKKKKKKGFLSFM--RKKD 731
>AF039043-5|AAK70639.1| 732|Caenorhabditis elegans Adducin protein
1, isoform b protein.
Length = 732
Score = 27.1 bits (57), Expect = 1.6
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 7 GNLLEEFSTLALSSEQPEKTTNNFKKPGILDFLHSRKRD 45
GN T A E+P K KK G L F+ RK+D
Sbjct: 695 GNTTSRSCTTASEEEKPTKDEKKKKKKGFLSFM--RKKD 731
>AF039043-3|AAM54181.1| 682|Caenorhabditis elegans Adducin protein
1, isoform d protein.
Length = 682
Score = 27.1 bits (57), Expect = 1.6
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 7 GNLLEEFSTLALSSEQPEKTTNNFKKPGILDFLHSRKRD 45
GN T A E+P K KK G L F+ RK+D
Sbjct: 645 GNTTSRSCTTASEEEKPTKDEKKKKKKGFLSFM--RKKD 681
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 25.8 bits (54), Expect = 3.7
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Query: 6 LGNLLEEFSTLALSSEQPEKTTNNFKKPGILDFLHSRKRDIPNATAAAVN 55
L + ++ +A + +K TNN K G +DF + P A AAAV+
Sbjct: 123 LREMCSKYGNIASTKAIMDKATNNCKGYGFVDF------ESPQAAAAAVD 166
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 25.8 bits (54), Expect = 3.7
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Query: 6 LGNLLEEFSTLALSSEQPEKTTNNFKKPGILDFLHSRKRDIPNATAAAVN 55
L + ++ +A + +K TNN K G +DF + P A AAAV+
Sbjct: 97 LREMCSKYGNIASTKAIMDKATNNCKGYGFVDF------ESPQAAAAAVD 140
>AF125956-4|AAD14723.1| 353|Caenorhabditis elegans Serpentine
receptor, class h protein78 protein.
Length = 353
Score = 25.4 bits (53), Expect = 4.8
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 1 MVHRELGNLLEEFSTLALSSEQPEKTTNNFKKPGILD 37
++H L LL F+ LA+ + + F+KP +++
Sbjct: 296 IIHASLHGLLSTFTILAIHKPYRDFIFSKFRKPALVE 332
>AF098992-7|AAC67455.2| 224|Caenorhabditis elegans Hypothetical
protein F53C3.4 protein.
Length = 224
Score = 25.4 bits (53), Expect = 4.8
Identities = 12/47 (25%), Positives = 20/47 (42%)
Query: 24 EKTTNNFKKPGILDFLHSRKRDIPNATAAAVNIVRMYIETEAARVNY 70
++TT F P + PNAT + + + ++RVNY
Sbjct: 174 KRTTKRFNLPRSTPEVQELTPSAPNATNKVTTLFKKVVSIFSSRVNY 220
>AF014940-2|AAB63934.1| 232|Caenorhabditis elegans Hypothetical
protein W02D7.4 protein.
Length = 232
Score = 25.4 bits (53), Expect = 4.8
Identities = 11/37 (29%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 1 MVHRELGNLLEEFSTLALSSEQ--PEKTTNNFKKPGI 35
++HRE+G++ +F+ L ++++ T N KK I
Sbjct: 131 IIHREIGSVAPQFTRLGIATKMVTTNMTKRNLKKYNI 167
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 25.0 bits (52), Expect = 6.4
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 24 EKTTNNFKKPGILDFLHSRKRDIPNATAAAVNIVRM 59
E T + K+ GIL+ S+ + + AT AA+ I+R+
Sbjct: 495 EGTIRDNKEAGILEPALSKVKSLKFATEAAITILRI 530
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 25.0 bits (52), Expect = 6.4
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 24 EKTTNNFKKPGILDFLHSRKRDIPNATAAAVNIVRM 59
E T + K+ GIL+ S+ + + AT AA+ I+R+
Sbjct: 495 EGTIRDNKEAGILEPALSKVKSLKFATEAAITILRI 530
>Z71258-2|CAA95781.2| 668|Caenorhabditis elegans Hypothetical
protein C01H6.2 protein.
Length = 668
Score = 24.6 bits (51), Expect = 8.4
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Query: 9 LLEEFSTLALSSE-QPEKTTNNFKKPGILDFLHS---RKRDIPNATAAAVNIVRMYIE 62
L+E LA ++ QP K NN+K + D L S KR N +R Y+E
Sbjct: 409 LIEPKHWLAAKTKYQPAKLRNNYKFASVEDILKSCKVAKRPETNECDNETEAIREYME 466
>AF025450-1|AAB70937.1| 321|Caenorhabditis elegans Hypothetical
protein C41H7.6 protein.
Length = 321
Score = 24.6 bits (51), Expect = 8.4
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 10 LEEFSTLALSSEQPEKTTNNFKKPGILDFLHSRK 43
+EE+ + L+S E T ++ K +LD L RK
Sbjct: 29 MEEYMGMELNSVYEEATKDSALKKVVLDLLKDRK 62
>AC006673-3|AAF39929.1| 861|Caenorhabditis elegans Hypothetical
protein K09D9.11 protein.
Length = 861
Score = 24.6 bits (51), Expect = 8.4
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 5 ELGNLLEEFSTLALSSEQPEKTTNN 29
E+ +LLE+ +T+ ++E EKT N
Sbjct: 247 EINSLLEQVTTIQNNTENLEKTVRN 271
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.316 0.130 0.360
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,718,901
Number of Sequences: 27539
Number of extensions: 56092
Number of successful extensions: 158
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 148
Number of HSP's gapped (non-prelim): 15
length of query: 77
length of database: 12,573,161
effective HSP length: 57
effective length of query: 20
effective length of database: 11,003,438
effective search space: 220068760
effective search space used: 220068760
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 51 (24.6 bits)
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