GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001419-TA|BGIBMGA001419-PA|IPR001128|Cytochrome P450
         (362 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...   214   1e-57
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...   132   6e-33
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    60   2e-11
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    23   5.4  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score =  214 bits (522), Expect = 1e-57
 Identities = 119/345 (34%), Positives = 186/345 (53%), Gaps = 11/345 (3%)

Query: 1   MLHLMIERANKYIEHVEMLCDHQPEQDIHTLVQKYTMATIAACAFGLDIDT-TDPNKDQL 59
           M +L+IE +     +++ L +     +   L  ++T   I +CAFG+D+ + T+ N +  
Sbjct: 147 MFYLIIECSLNLETYLDKLIEKNEPIECRELTARFTTDVIGSCAFGIDMSSMTNENSEFR 206

Query: 60  KTLEEIDRLSLTANFAFELDMMYPGVLKKLNSTLFPGFVSRFFKDVVKTIIEQRNGKPTD 119
           +   E+  ++       +L    P +   L   +     + FF  VV   I+ RN     
Sbjct: 207 RMGREVFAVNFMNVMRMKLKQFMPRLYDLLGYVMPDRTFAPFFTRVVTDTIKYRNDNNIV 266

Query: 120 RNDFMDLILALRQLGDIQATKRNSEDKEYSIELTDELIEAQAFVFYIAGYETSATTMTFM 179
           R DF+++++ L+         +N +  E +I+LTD LI AQAFVF++AG+ETS+TTM+  
Sbjct: 267 RPDFINMLMELQ---------KNPQKLE-NIKLTDSLIAAQAFVFFLAGFETSSTTMSNA 316

Query: 180 LYQLALNPDIQDKVIAEIDQGLKESKGEVTYEMLQNLTYFEKAFNETLRMYSIVEPLQRN 239
           LY+LALN D+Q K+  EI+    ++  E+ Y+ ++ + Y +K F ETLRMY     L R 
Sbjct: 317 LYELALNQDVQKKLREEINTFCPKNNKELKYDDIKEMEYLDKVFKETLRMYPPASILMRK 376

Query: 240 AKIDYKIPDTDIVIEKGTTVLFSPLGIHHDEKYYPNPSKFDPERFSPANISARHPCAHIP 299
           A  DY   DT I I K   +      IH D   YPNP  FDPERF    +++RHP  ++P
Sbjct: 377 AISDYTFNDTKITIPKEMKIWIPAFAIHRDSAIYPNPDSFDPERFDQDAMASRHPMHYLP 436

Query: 300 FGTGPRNCIGMRFAKIQSRVCMVKMFSKFRFELAKNTPRNLDIDP 344
           FG GPRNCIG RFA  Q++V ++ +    + E+ + T    + DP
Sbjct: 437 FGDGPRNCIGARFAVYQTKVGLITILRNHKVEVCEKTIIPYEFDP 481


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score =  132 bits (318), Expect = 6e-33
 Identities = 62/186 (33%), Positives = 99/186 (53%)

Query: 144 EDKEYSIELTDELIEAQAFVFYIAGYETSATTMTFMLYQLALNPDIQDKVIAEIDQGLKE 203
           E  +  + LTD+ ++ Q       G++T+A+  +F L  +  +PDIQ+KVI E+D+   +
Sbjct: 325 EAGQNGVLLTDKEVKEQVDTIMFEGHDTTASGSSFFLAVMGCHPDIQEKVIQELDEIFGD 384

Query: 204 SKGEVTYEMLQNLTYFEKAFNETLRMYSIVEPLQRNAKIDYKIPDTDIVIEKGTTVLFSP 263
           S    T++    + Y E+   ETLRMY  V  + R  K D K+   D  I  G TV+   
Sbjct: 385 SDRPATFQDTLEMKYLERCLLETLRMYPPVPLIAREIKTDLKLASGDYTIPAGCTVVIGT 444

Query: 264 LGIHHDEKYYPNPSKFDPERFSPANISARHPCAHIPFGTGPRNCIGMRFAKIQSRVCMVK 323
             +H     YPNP  FDP+ F P   + RH  A +PF  GPR+C+G ++A ++ ++ +  
Sbjct: 445 FKLHRQPHIYPNPDVFDPDNFLPEKTANRHYYAFVPFSAGPRSCVGRKYAMLKLKIVLST 504

Query: 324 MFSKFR 329
           +   FR
Sbjct: 505 ILRNFR 510


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 60.5 bits (140), Expect = 2e-11
 Identities = 44/183 (24%), Positives = 83/183 (45%), Gaps = 6/183 (3%)

Query: 146 KEYSIELTDELIEAQAFVFYIAGYETSATTMTFMLYQLALNPDIQDKVIAEIDQGLKESK 205
           ++ ++++ D+  +A    F  AG  T   T+ F+   +  NP +Q+K+  E    L  + 
Sbjct: 311 RQKNLDIRDK--KAAIVDFIAAGIHTLGNTLVFLFDLIGRNPTVQNKLYEET-YALAPAG 367

Query: 206 GEVTYEMLQNLTYFEKAFNETLRMYSIVEPLQRNAKIDYKIPDTDIVIEKGTTVLFSPLG 265
            ++T + L+   Y      E+LR+      + R   +D  I  +   +  GT VL     
Sbjct: 368 CDLTIDNLRKAKYLRACITESLRLIPTTTCIARI--LDEPIELSGYRLTAGTVVLLHTWI 425

Query: 266 IHHDEKYYPNPSKFDPERFSPANISARHPCAHIPFGTGPRNCIGMRFAKIQSRVCMVKMF 325
              +E+ + +  K+ PER++    +   P    PFG G R C G RF  +  ++ + K+ 
Sbjct: 426 AGLNEENFKDAKKYLPERWTTPT-TPHSPLLVAPFGAGRRICPGKRFVDLALQLILAKII 484

Query: 326 SKF 328
            +F
Sbjct: 485 REF 487


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 22.6 bits (46), Expect = 5.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)

Query: 20  CDHQPEQDIHTLVQKY 35
           C+H+P +   T VQKY
Sbjct: 416 CEHRPFEPKSTAVQKY 431


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.137    0.399 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,348
Number of Sequences: 429
Number of extensions: 4923
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 4
length of query: 362
length of database: 140,377
effective HSP length: 59
effective length of query: 303
effective length of database: 115,066
effective search space: 34864998
effective search space used: 34864998
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 44 (21.8 bits)