Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001418-TA|BGIBMGA001418-PA|undefined
(80 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC24C9.05c |mug70||conserved protein |Schizosaccharomyces pomb... 28 0.18
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 0.55
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 26 0.72
SPCC736.12c |||conserved protein|Schizosaccharomyces pombe|chr 3... 24 2.2
SPBC21C3.11 |ubx4||UBX domain protein Ubx4 |Schizosaccharomyces ... 24 2.9
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 23 5.1
SPBP4H10.10 |||rhomboid family protease|Schizosaccharomyces pomb... 23 6.7
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 22 8.9
SPAC1002.14 |itt1||ubiquitin-protein ligase E3 |Schizosaccharomy... 22 8.9
SPCC18.17c |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 22 8.9
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 22 8.9
>SPAC24C9.05c |mug70||conserved protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 730
Score = 27.9 bits (59), Expect = 0.18
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Query: 19 EVIVDDQRRRTPRCSVRSSGCIGVVGVLTYPVGSEPPFSHKTSYLGLIEKLKKGATN 75
E I+ +RR PR VR GV + S PP S S +G ++KG N
Sbjct: 635 EAILLARRRGLPRLEVR-----GVAAFTNHLESSHPPISTVDSSIGSASVVEKGVAN 686
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.2 bits (55), Expect = 0.55
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 25 QRRRTPRCSVRSSGCIGVVGVLTYPVGSEPPFSHKTSYLGLIEKLKKGA 73
+RR + S S L + ++P S+K+SY+ +EKLK+ +
Sbjct: 1724 RRRMLQQMSPLKSNKFSGTNDLNFQQATKPDGSNKSSYMERLEKLKQNS 1772
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase kinase
Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 25.8 bits (54), Expect = 0.72
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 4 QTRGVTV-GTPDRLVVEVIVDDQRRRTPRCSVRSSGCIGVVGVLTYPVGSEPPFSHKTSY 62
Q RG ++ GTP + E+I+ + R + S GC+ ++ GS PP+ ++
Sbjct: 1300 QNRGYSLTGTPTYMAPELILGNPSERVGAMDIWSLGCV----IVEMATGS-PPWPRLDNH 1354
Query: 63 LGLIEKLKKGATNP 76
L+ + A NP
Sbjct: 1355 FSLMYHI--AAHNP 1366
>SPCC736.12c |||conserved protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 437
Score = 24.2 bits (50), Expect = 2.2
Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 10/63 (15%)
Query: 13 PDRLVVEVIVDDQR-------RRTP---RCSVRSSGCIGVVGVLTYPVGSEPPFSHKTSY 62
P RL V+V R RR P V SS G +YPV S P SH+ +
Sbjct: 181 PRRLADPVVVGSSRYVEEEVYRRPPYTLASEVPSSASAYQAGYSSYPVRSSPQLSHEDTR 240
Query: 63 LGL 65
G+
Sbjct: 241 HGI 243
>SPBC21C3.11 |ubx4||UBX domain protein Ubx4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 425
Score = 23.8 bits (49), Expect = 2.9
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 35 RSSGCIGVVGVLTYP-VGSEPPFSHKTSYLGLIEKLKK 71
+ G I V V P V S+ PF K S+ ++ ++KK
Sbjct: 257 KDEGVIEKVAVNNTPSVSSKSPFPKKKSFSSMLAQVKK 294
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 23.0 bits (47), Expect = 5.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 8 VTVGTPDRLVVEVIVDDQRRRTPR 31
V V TP + I+DD++R PR
Sbjct: 119 VLVLTPFESIKTAIIDDRKRPNPR 142
>SPBP4H10.10 |||rhomboid family protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 392
Score = 22.6 bits (46), Expect = 6.7
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 46 LTYPVGSEPPFSHKTSYLG 64
L +P G PP S YLG
Sbjct: 247 LLFPKGPYPPISRPALYLG 265
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 22.2 bits (45), Expect = 8.9
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 42 VVGVLTYPVGSEPPFSHKTSYLGLIEKL 69
V VL P+ + PP + YLG + +L
Sbjct: 297 VTPVLQMPLDTHPPTTRDPIYLGTMLRL 324
>SPAC1002.14 |itt1||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 435
Score = 22.2 bits (45), Expect = 8.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 48 YPVGSEPPFSHKTSYLGLIEK 68
YP S P F K+S+L L +K
Sbjct: 82 YPFNSPPTFFLKSSWLPLKQK 102
>SPCC18.17c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 488
Score = 22.2 bits (45), Expect = 8.9
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 40 IGVVGV-LTYPVGSEPPFSHKTSYLGLIEKLKKGATNPY 77
+ V+G+ L P E S KT YL I + KG+ + Y
Sbjct: 228 VDVLGIMLEAPFTYEYISSEKTKYLDTIAQDYKGSADSY 266
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 22.2 bits (45), Expect = 8.9
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 49 PVGSEPPFSHKTSYLGLIEKLKKGATNPYRLK 80
P PP SH+ SY E LK+ + P + K
Sbjct: 283 PAPKLPPPSHEESYNPPEEYLKQSSDFPKKYK 314
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.138 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 369,423
Number of Sequences: 5004
Number of extensions: 12137
Number of successful extensions: 24
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 11
length of query: 80
length of database: 2,362,478
effective HSP length: 59
effective length of query: 21
effective length of database: 2,067,242
effective search space: 43412082
effective search space used: 43412082
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 45 (22.2 bits)
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