GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001418-TA|BGIBMGA001418-PA|undefined
         (80 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    25   0.12 
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    19   5.7  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    19   5.7  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    19   10.0 

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 25.0 bits (52), Expect = 0.12
 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 2/57 (3%)

Query: 24  DQRRRTPRCSVRS--SGCIGVVGVLTYPVGSEPPFSHKTSYLGLIEKLKKGATNPYR 78
           D+  ++P  SV S  S C G V  LT      PP  H  S   L+     G   P+R
Sbjct: 483 DEAVKSPLGSVSSTESTCSGEVASLTEYHHVAPPSGHHASSAPLLAATLAGGLCPHR 539


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 19.4 bits (38), Expect = 5.7
 Identities = 7/24 (29%), Positives = 13/24 (54%)

Query: 20  VIVDDQRRRTPRCSVRSSGCIGVV 43
           V++DD +   P C++  +    VV
Sbjct: 172 VVLDDSKEEHPTCALDLTPTYAVV 195


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
          protein.
          Length = 587

 Score = 19.4 bits (38), Expect = 5.7
 Identities = 8/15 (53%), Positives = 9/15 (60%)

Query: 28 RTPRCSVRSSGCIGV 42
          R  RCSVR S   G+
Sbjct: 15 RESRCSVRCSAASGL 29


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 18.6 bits (36), Expect = 10.0
 Identities = 7/12 (58%), Positives = 8/12 (66%)

Query: 48  YPVGSEPPFSHK 59
           Y VGS  PF+ K
Sbjct: 311 YEVGSNVPFNFK 322


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.138    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,607
Number of Sequences: 429
Number of extensions: 1063
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 80
length of database: 140,377
effective HSP length: 47
effective length of query: 33
effective length of database: 120,214
effective search space:  3967062
effective search space used:  3967062
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
S2: 36 (18.6 bits)