Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001417-TA|BGIBMGA001417-PA|IPR002867|Zinc finger,
C6HC-type, IPR001841|Zinc finger, RING-type
(503 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_183| Best HMM Match : IBR (HMM E-Value=0.015) 287 1e-77
SB_39228| Best HMM Match : IBR (HMM E-Value=4.1e-20) 140 3e-33
SB_41628| Best HMM Match : No HMM Matches (HMM E-Value=.) 130 2e-30
SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42) 125 1e-28
SB_30176| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 3e-26
SB_7039| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 1e-21
SB_384| Best HMM Match : IBR (HMM E-Value=1.1e-12) 96 7e-20
SB_41985| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 2e-19
SB_42415| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 6e-15
SB_44477| Best HMM Match : IBR (HMM E-Value=0.00086) 69 7e-12
SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16) 67 4e-11
SB_20372| Best HMM Match : IBR (HMM E-Value=5.4e-08) 58 1e-08
SB_49160| Best HMM Match : IBR (HMM E-Value=2.5e-15) 53 6e-07
SB_32622| Best HMM Match : Ank (HMM E-Value=2.2e-05) 48 1e-05
SB_59145| Best HMM Match : Keratin_B2 (HMM E-Value=0.0012) 45 1e-04
SB_55976| Best HMM Match : zf-C3HC4 (HMM E-Value=0.087) 40 0.005
SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.006
SB_35379| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.014
SB_40225| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.025
SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 37 0.044
SB_12737| Best HMM Match : C_tripleX (HMM E-Value=0.027) 36 0.10
SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.13
SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.31
SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 34 0.31
SB_39137| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.41
SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 33 0.41
SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07) 33 0.41
SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11) 33 0.54
SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21) 33 0.71
SB_2351| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-07) 32 0.94
SB_5871| Best HMM Match : IBR (HMM E-Value=0.00018) 32 0.94
SB_58465| Best HMM Match : zf-B_box (HMM E-Value=0.00022) 32 1.2
SB_57496| Best HMM Match : TSP_1 (HMM E-Value=3.2e-13) 31 1.6
SB_45659| Best HMM Match : E_Pc_C (HMM E-Value=1.2) 31 1.6
SB_44951| Best HMM Match : TSP_1 (HMM E-Value=3.2e-13) 31 1.6
SB_41313| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_2797| Best HMM Match : YscO (HMM E-Value=2.8) 31 1.6
SB_15859| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_4328| Best HMM Match : Vicilin_N (HMM E-Value=0.39) 31 1.6
SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14) 31 2.2
SB_14437| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.2
SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 31 2.9
SB_40137| Best HMM Match : M-inducer_phosp (HMM E-Value=0.68) 30 3.8
SB_10780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.8
SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19) 30 3.8
SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27) 30 5.0
SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.0
SB_6600| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.0
SB_31692| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_39478| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_5147| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_53505| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.7
SB_45112| Best HMM Match : YscO (HMM E-Value=3) 29 8.7
SB_41761| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.025) 29 8.7
SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.7
>SB_183| Best HMM Match : IBR (HMM E-Value=0.015)
Length = 228
Score = 287 bits (704), Expect = 1e-77
Identities = 134/191 (70%), Positives = 156/191 (81%), Gaps = 20/191 (10%)
Query: 333 WYSCNRYDEDEAKAARDAQERSRAALQRYLFYCNRYMNHMQSLRFESKLYASVKEKMEEM 392
WYSCNRYDE EA+AARDAQ RSR+AL+RYLFYCNR+MNH QS +FESKLY+ VK+KMEEM
Sbjct: 36 WYSCNRYDEKEAQAARDAQSRSRSALERYLFYCNRFMNHAQSAKFESKLYSQVKQKMEEM 95
Query: 393 QQHNMSWIEVQFLKKAVDILCQCRQTLMYTYVFAYYLRKNNQSVIFEDNQRDLESATETL 452
QQHNMSWIEVQFL+KAVD+LC CR TL YTYVFA+YL++NNQSVIFEDNQ+DLE ATETL
Sbjct: 96 QQHNMSWIEVQFLRKAVDVLCLCRNTLKYTYVFAFYLKRNNQSVIFEDNQKDLEMATETL 155
Query: 453 SEYLERDITSENLADIK--------------------QKVQDKYRYCDSRRKVLLEHVHE 492
SEYLERDITSE L++IK Q VQDKYRYC++RRK LL+HV+E
Sbjct: 156 SEYLERDITSEGLSNIKQIVQDKYRLVQIVQDKYRLVQIVQDKYRYCEARRKALLDHVYE 215
Query: 493 GYEKDCWDYTE 503
GY+ D W+Y +
Sbjct: 216 GYDTDIWEYVD 226
Score = 65.7 bits (153), Expect = 8e-11
Identities = 24/38 (63%), Positives = 29/38 (76%)
Query: 217 NRLLRWCPSPDCSNAIKVAYVEAAPVTCRCGHTFCFAC 254
NRL++WCP PDC NAIK Y +A PVTC CG TF ++C
Sbjct: 2 NRLMKWCPGPDCDNAIKANYHDALPVTCLCGFTFWYSC 39
>SB_39228| Best HMM Match : IBR (HMM E-Value=4.1e-20)
Length = 303
Score = 140 bits (338), Expect = 3e-33
Identities = 71/190 (37%), Positives = 111/190 (58%), Gaps = 11/190 (5%)
Query: 304 CNHMVC----KNQNCKADFCWVCLGPWEPHGSSWYSCNRYDEDEAKAARDAQERSRAALQ 359
CN M C + + DFCW+C+G W+ HGS +Y C+RY + A A ++R AL+
Sbjct: 115 CNTMFCFSCGEKYHAPTDFCWMCMGTWKSHGSEYYECSRYKSNPNIANESAGIQAREALK 174
Query: 360 RYLFYCNRYMNHMQSLRFESKLYASVKEKMEEMQQHNM-SWIEVQFLKKAVDILCQCRQT 418
+YLFY R+ NH SL+ E++ + +K++E +N+ +WI+ Q+L A +L +CR T
Sbjct: 175 KYLFYFERWQNHADSLKKEAETQRKINQKIQEKVNNNIGTWIDWQYLLNATSLLAKCRYT 234
Query: 419 LMYTYVFAYYLRKNNQSVIFEDNQRDLESATETLSEYLERDITSENLADIKQKVQDKYRY 478
LMYTY +AY++ +N + +FE Q LE E LS LERD S + D + ++
Sbjct: 235 LMYTYPYAYFI-ENGRKKLFEYQQAQLEVEIENLSWKLERD-DSYSRGDFENQMD----I 288
Query: 479 CDSRRKVLLE 488
+ RR+ LL+
Sbjct: 289 AEKRRQTLLK 298
Score = 63.7 bits (148), Expect = 3e-10
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 183 CDILVDDATVMRLVRDSRVKLKYQHIITNSFVECNRLLRWCPSPDCSNAIKVAYVEAAPV 242
C++LV + V+ +++ +++ K+ + + N ++ LRWCP +C ++ A V
Sbjct: 51 CNLLVGETVVLNVLKGGKLREKFINFLFNDQIKTFSKLRWCPGINCGFLVRAEEPAAKRV 110
Query: 243 TC-RCGHTFCFACGENWHDPVRCC 265
C +C FCF+CGE +H P C
Sbjct: 111 ICSKCNTMFCFSCGEKYHAPTDFC 134
>SB_41628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 690
Score = 130 bits (315), Expect = 2e-30
Identities = 78/245 (31%), Positives = 116/245 (47%), Gaps = 21/245 (8%)
Query: 100 QLFSEARVINPFRKPVIQRPKLPRRISTSGM----EECEICFSVLPTSIMTGL-ECGHRF 154
++FS + ++ ++++ K+ I T +EC ICF + MT L CGH F
Sbjct: 275 KVFSVSEANEKLQQDLVKQAKIRSGIDTRDWFMVSKECGICFGDFRENKMTALMSCGHSF 334
Query: 155 CTQCWCEYLTTKIMEEGLGQTIACAAHACDILVDDATVMRLVRDSRVKLKYQHIITNSFV 214
CT+CW YL ++I G G I C + CD+ +D+ T+M L K + + N +
Sbjct: 335 CTECWEFYLKSQI-SRGEGD-IGCPGYNCDVTLDNVTIMSLTPSWYPKFLKRKL--NRAL 390
Query: 215 ECNRLLRWCPSPDCSNAIKVAYVE----AAPVTCRCGHTFCFACGENWHDPVRCCLLRKW 270
E RWCP +C + + A V C+CG +CF CG H P C RK+
Sbjct: 391 EMTSSWRWCPGKNCRQVVNGTELSPNSSAWSVLCKCGGIWCFKCGSQAHWPASCVEARKF 450
Query: 271 IKKCDD-----DSETSNWI-AANTKECPKCNVTIEKDGGCNHMVCKNQNCKADFCWVCLG 324
+ + +E I + K CP C+ IEK GCN M C CK +FCW+CL
Sbjct: 451 YRIAGNYEKLLINERKELINSVMVKNCPSCHYPIEKHLGCNFMTC--VMCKTNFCWICLI 508
Query: 325 PWEPH 329
++ H
Sbjct: 509 DFKDH 513
>SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42)
Length = 1207
Score = 125 bits (301), Expect = 1e-28
Identities = 74/218 (33%), Positives = 103/218 (47%), Gaps = 27/218 (12%)
Query: 133 CEICFSVLPTSI--MTGLE-CGHRFCTQCWCEYLTTKIMEEGLGQT-IACAAHACDILVD 188
C +C+ + SI + L C H FC +CW YL +I + G+T I C + C VD
Sbjct: 654 CRVCYEMATFSIEGFSVLNACSHWFCDECWQAYLDEQIRQ---GKTSIVCPGYKCATPVD 710
Query: 189 DATVMRLVRDSRVKLKYQHIITNSFVECNRLLRWCPSPDCSNAIKVA---------YVE- 238
+ T++ LV + + LKY + VE N RWCP CS KV +++
Sbjct: 711 NTTILALVPE--LYLKYTSQVRQKAVEANPSWRWCPGNKCSLVNKVTKRSCYHGNTFLDY 768
Query: 239 -AAPVTCRCGHTFCFACGENWHDPVRCCLLRKWIKKCDDDSETSNWI-----AANTKECP 292
PV C CG T+C C E H P +C + +++ K+ E N + + K CP
Sbjct: 769 GGVPVACACGKTWCSECQEETHWPAKCEIAQRFRKQTKAYQEILNGMDNRIKSVFVKRCP 828
Query: 293 KCNVTIEKDGGCNHMVCKNQNCKADFCWVCLGPWEPHG 330
C +EK+GGC HM C C FCW CL W HG
Sbjct: 829 ACRYPVEKNGGCPHMSC--TMCGGHFCWECLKDWNLHG 864
>SB_30176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1012
Score = 116 bits (280), Expect = 3e-26
Identities = 71/219 (32%), Positives = 101/219 (46%), Gaps = 21/219 (9%)
Query: 136 CFSVLPTSIMTGLE-CGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHACDILVDDATVMR 194
C TGL C H+FC CW +YLT +I + C H CD ++DD TVM
Sbjct: 365 CLKFEHEDFSTGLLLCSHKFCNSCWHQYLTVQIRSGH--SPLKCPGHMCDAIIDDTTVMS 422
Query: 195 LVRDS-----RVKLKYQHIITNSFVECNRLLRWCPS--PDC-SNAIKVAYVEAAPVTCRC 246
LV + R K+ + + +C + + P C +N+ +V V CRC
Sbjct: 423 LVPELLEQFIRNKVNMKLCSGQQWQQCEKCAFYVKLVLPTCIANSTEVP----VHVVCRC 478
Query: 247 GHTFCFACGENWHDPVRCCLLRK-WIKKCDDDSETSN---WIAANTKECPKCNVTIEKDG 302
G+T+C C + H P C + W+K D SE + + K CP C IEK+G
Sbjct: 479 GNTWCSRCKDEPHWPASCSQAERFWLKYADQLSEYQRKDLFYSVYIKRCPHCRYPIEKNG 538
Query: 303 GCNHMVCKNQNCKADFCWVCLGPWEPHGSSWYSCNRYDE 341
GC HM C CKA FCW CL + H ++ S + ++
Sbjct: 539 GCPHMYC--ILCKATFCWHCLTLFSKHSANGCSIKKEEK 575
>SB_7039| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 577
Score = 101 bits (243), Expect = 1e-21
Identities = 66/239 (27%), Positives = 104/239 (43%), Gaps = 28/239 (11%)
Query: 100 QLFSEARVINPFRKPVIQRPKLPRRISTSGMEECEICFSVLPTSIMTGLE-CGHRFCTQC 158
+LF ++ +KP + R+ S C +C++ P S+ + C HR C +C
Sbjct: 50 RLFGRSKSYKGEKKP----ESVVRKPSGESCVICPVCYAQRPRSLFPDISTCEHRSCIEC 105
Query: 159 WCEYLTTKIMEEGLGQTIACAAHACDILVDDATVMRLVRDSRVKLKYQHIITNSFVECNR 218
+Y+T +I E + T C C + ++ D + KY + +
Sbjct: 106 LRQYMTIEINESRVNLT--CPE--CSERFHPNDIKYILNDDTLMNKYDEFTLRRVLVSDP 161
Query: 219 LLRWCPSPDCSNAIKVAYVEAAP-VTCR---CGHTFCFACGENWHDPVRC--------CL 266
RWCP+PDC A+ + P + C C FC+ C + WH + C L
Sbjct: 162 DCRWCPAPDCGYAVIATGCASCPKLQCERPGCKTEFCYHCKQLWHPNLTCDSARYRRATL 221
Query: 267 LRKWIKKCDDDSETSNWIAANTKECPKCNVTIEK--DGGCNHMVCKNQNCKADFCWVCL 323
+R + S +SN + K CP+C+ I K DG CNHM C C A+FCW+C+
Sbjct: 222 IRTLVSDVHQSSHSSN---DDMKPCPRCSAFIIKMDDGSCNHMTC--AVCGAEFCWLCM 275
Score = 32.7 bits (71), Expect = 0.71
Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 292 PKCNVTIEKDG--GCNHMVCKNQNCKADFCWVCLGPWEPH 329
P C + G C + C+ CK +FC+ C W P+
Sbjct: 169 PDCGYAVIATGCASCPKLQCERPGCKTEFCYHCKQLWHPN 208
>SB_384| Best HMM Match : IBR (HMM E-Value=1.1e-12)
Length = 259
Score = 95.9 bits (228), Expect = 7e-20
Identities = 66/217 (30%), Positives = 98/217 (45%), Gaps = 14/217 (6%)
Query: 113 KPVIQRPKLPRRISTSGMEECEICFSVLPTSIMTGLE-CGHRFCTQCWCEYLTTKIMEEG 171
K V+Q L R T C+IC + PT L+ CG FC +C +Y+ I +
Sbjct: 7 KTVVQEGSLRHRPKTL---YCKICLADCPTKKGAILKSCGCFFCKECLKQYVAHAIADGS 63
Query: 172 LGQTIACAAHACDILVD--DATVMRLVRDSRVKLKYQHIITNSFVECNRLLRWCPSPDCS 229
+ Q I C C D ++ + L+ + + +Q + ++ ++ +CP PDC
Sbjct: 64 VLQ-IPCPDGVCPDKGDLMESEIADLIAEDLFQ-NFQKMRAIKEIQISKSKAFCPKPDCK 121
Query: 230 NAIKVAYVEAAPVTC-RCGHTFCFACGENWHDPVRCCLLRKWIKKCDDDSETSNW--IAA 286
++ A V C CG++FCFAC WH P + C + E N +
Sbjct: 122 GVVESIPGAAKEVCCSECGYSFCFACKGPWH-PEKHCQNKGEKANGIKFFELVNGEEVLV 180
Query: 287 NTKECPKCNVTIEKDGGCNHMVCKNQNCKADFCWVCL 323
K CP C V I++D GC M+C NCK FCW CL
Sbjct: 181 EIKACPTCQVLIQRDEGCAQMMC--GNCKHIFCWHCL 215
Score = 35.9 bits (79), Expect = 0.076
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 291 CPK--CNVTIEKDGGCNHMVCKNQNCKADFCWVCLGPWEP 328
CPK C +E G VC ++ C FC+ C GPW P
Sbjct: 115 CPKPDCKGVVESIPGAAKEVCCSE-CGYSFCFACKGPWHP 153
>SB_41985| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 472
Score = 94.7 bits (225), Expect = 2e-19
Identities = 58/227 (25%), Positives = 98/227 (43%), Gaps = 32/227 (14%)
Query: 124 RISTSGMEECEICFSVLPTSIMTGLE-CGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHA 182
R+ + C++CFS P S+ CGH FC +C Y T +I +G + + C
Sbjct: 204 RVFDTSYFTCDVCFSEKPGSMCLAFHNCGHVFCCECMTGYFTVQI-NDGSVKALTCPTSK 262
Query: 183 CDILVDDATVMRLVRDSRVKLKYQHIITNSFVECNRLLRWCPSPDCSNAIKVAYVEAAPV 242
C+ + V R+V + KY + S ++ + +CP PDC + + V +
Sbjct: 263 CESQALPSQVKRVVSEETFA-KYDKFLLQSSLDGMSDITYCPRPDCQSPVLVDSESTIGL 321
Query: 243 TCRCGHTFCFACGENWHDPVRCCL-------LR-KWIKKCDDDSE--------------- 279
C FC C +H C + LR +++K +++
Sbjct: 322 CPACSFAFCKICRLGYHGVSPCSIKNSEFRKLRTEYLKATEEERALLDQRYGRDRLKKVF 381
Query: 280 ----TSNWIAANTKECPKCNVTIEKDGGCNHMVCKNQNCKADFCWVC 322
+ +W+ +N +CP C+ I+K GCN M C C+A+FCW+C
Sbjct: 382 EEVVSEDWVKSNCTKCPSCSYQIQKFDGCNKMTC--IKCRANFCWLC 426
>SB_42415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 806
Score = 79.4 bits (187), Expect = 6e-15
Identities = 55/198 (27%), Positives = 85/198 (42%), Gaps = 20/198 (10%)
Query: 132 ECEICFSVLPTSIMTGLECGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHACDILVDDAT 191
+C IC+ P +M +C CT C +L ++ + Q ++ CD
Sbjct: 436 KCVICYEG-PNYLMQCQKCKQYVCTPCLKAHLVERLHQ----QDVSPQCPNCDQEYGATF 490
Query: 192 VMRLVRDSRVKLKYQHIITNSFVECNRLLRWCPSPDCSNAIKVAYVEAAPVTCR---CGH 248
V++ + D ++ Y ++ N+ R CP C+ A+ + P+ C+ CG
Sbjct: 491 VLQHLDDKSLQELYLSKSLELYLIRNKETRRCPGSGCNFAV-LNPGGRCPIECQNPGCGI 549
Query: 249 TFCFACGENWHDPVRCCLLRKWIKKCDDDSETSNWI--AANTKECPKCNVTIEK--DGGC 304
FC C W D L +C+D +W A N K CP C IEK DG C
Sbjct: 550 KFCSDCEHKWGD-----LAMLTPHECEDMMVEEDWFKGAVNVKPCPGCGFLIEKLDDGSC 604
Query: 305 NHMVCKNQNCKADFCWVC 322
N ++CK C+ FCW+C
Sbjct: 605 NEVLCK--YCRVYFCWIC 620
Score = 31.1 bits (67), Expect = 2.2
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 288 TKECPK--CNVTIEKDGGCNHMVCKNQNCKADFCWVCLGPW 326
T+ CP CN + GG + C+N C FC C W
Sbjct: 519 TRRCPGSGCNFAVLNPGGRCPIECQNPGCGIKFCSDCEHKW 559
>SB_44477| Best HMM Match : IBR (HMM E-Value=0.00086)
Length = 627
Score = 69.3 bits (162), Expect = 7e-12
Identities = 50/199 (25%), Positives = 79/199 (39%), Gaps = 11/199 (5%)
Query: 132 ECEICFSVLPTSIMTGLECGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHACDILVDDAT 191
EC C+ + M GH FC C Y + +G T+ C C+ +
Sbjct: 370 ECGCCYCDVAFEDMVQCLDGHLFCENCLMNYAKESVFGQGKA-TLMCMTSECNSSFPLSQ 428
Query: 192 VMRLVRDSRVKLKYQHIITN---SFVECNRLLRWCPSPDCSNAIKVAYVEAAPVTCRCGH 248
+ + + ++ + KY+ + S E L+R CPS + + + + +CG
Sbjct: 429 LKKTLPEN-ILSKYEDRLQEEALSLAEMEDLVR-CPSCEFAAVLPSGNKVFKCLNQKCGK 486
Query: 249 TFCFACGENWHDP--VRCCLLRKWIKKCDDDSETSNWIAANTKECPKCNVTIEKDGGCNH 306
C C ENW D ++C + K +K S A ++C KC K GCN
Sbjct: 487 ETCRHCKENWSDHFGLKCSEIEKKGEKDLRISYEERMTMAKIRKCHKCGCEFTKSDGCNK 546
Query: 307 MVCKNQNCKADFCWVCLGP 325
M C+ C C+VC P
Sbjct: 547 MTCR---CGTTQCYVCRKP 562
Score = 30.3 bits (65), Expect = 3.8
Identities = 20/76 (26%), Positives = 25/76 (32%), Gaps = 3/76 (3%)
Query: 291 CPKCNVTIEKDGGCNHMVCKNQNCKADFCWVCLGPWEPHGSSWYSCNRYDEDEAKAAR-D 349
CP C G C NQ C + C C W H C+ ++ K R
Sbjct: 461 CPSCEFAAVLPSGNKVFKCLNQKCGKETCRHCKENWSDHFG--LKCSEIEKKGEKDLRIS 518
Query: 350 AQERSRAALQRYLFYC 365
+ER A R C
Sbjct: 519 YEERMTMAKIRKCHKC 534
>SB_5773| Best HMM Match : HA2 (HMM E-Value=3e-16)
Length = 2352
Score = 66.9 bits (156), Expect = 4e-11
Identities = 51/197 (25%), Positives = 74/197 (37%), Gaps = 15/197 (7%)
Query: 131 EECEICFSVLPTSIMTGLECGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHACDILVDDA 190
E C CF + CGH +C C + K + CA C L+
Sbjct: 1949 ELCPACFCEVDNPYQLAT-CGHVYCRGCVTNLIEAKQFP------LTCAYEDCSTLLAIH 2001
Query: 191 TVMRLVRDSRVKLKYQHIITNSFVECNR-LLRWCPSPDCSNAIKVAYVEAAPVTCRCGHT 249
V L ++ + SFV N+ R CP+PDC +V C
Sbjct: 2002 DVDNL-KECDIVNDIITASLESFVAANQDKARHCPTPDCPMVYRVRGDGKMFKCSECETE 2060
Query: 250 FCFACGENWHDPVRCCLLRKWIKKCDDDSETSNWIA---ANTKECPKCNVTIEKDGGCNH 306
C C +++H + C + + W+ +N K CPKC IEK+ GC++
Sbjct: 2061 VCTCCHKSYHVGISCGDYALSKTEIGQEHLVEKWMREDPSNRKRCPKCRTGIEKNEGCSY 2120
Query: 307 MVCKNQNCKADFCWVCL 323
M CK C A W C+
Sbjct: 2121 MGCK---CGAHIHWNCM 2134
>SB_20372| Best HMM Match : IBR (HMM E-Value=5.4e-08)
Length = 341
Score = 58.4 bits (135), Expect = 1e-08
Identities = 51/212 (24%), Positives = 83/212 (39%), Gaps = 28/212 (13%)
Query: 133 CEICF--SVLPTSIMTGLECGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHACD-ILVDD 189
C +CF ++M C C C ++ K+ +G+ + I C CD IL++D
Sbjct: 29 CFVCFLHGSSSNAVMLRDCCKGTICKNCLQCHIGEKV-SQGIIKII-CPLEDCDRILLED 86
Query: 190 ATVMRLVRDSRVKLKYQHIITN--------SFVECNRLLRWCP----------SPDCSNA 231
++ + + KY+ T+ + C+R+ R P +
Sbjct: 87 E--IQTIASEEIWRKYEKFKTDIEQNPNIKTCPNCSRIYRREPVKQDERVNEKQTETKTK 144
Query: 232 IKVAYVEAAPVTCR-CGHTFCFACGENWHDPVRCCLLRKWIKKCDDDSETSNWIAANTKE 290
K E V CR C +C+ C WH + C + K ++ N
Sbjct: 145 TKEKNNEDCKVVCRECKFVWCYDCQAPWHYGISCKEFCQGDKSLKIWAKNRGAPTRNATR 204
Query: 291 CPKCNVTIEKDGGCNHMVCKNQNCKADFCWVC 322
CPKC V I+K GC+H+ C C +FC+ C
Sbjct: 205 CPKCQVFIQKKAGCDHITC--SRCMTEFCYQC 234
>SB_49160| Best HMM Match : IBR (HMM E-Value=2.5e-15)
Length = 582
Score = 52.8 bits (121), Expect = 6e-07
Identities = 33/148 (22%), Positives = 61/148 (41%), Gaps = 7/148 (4%)
Query: 120 KLPRRISTSGMEECEICFSVLPTSIMTGL-ECGHRFCTQCWCEYLTTKIMEEGLGQTIAC 178
K R C+IC L L ECGH C +C Y ++ G + C
Sbjct: 307 KFKREQFLRSRHSCDICIEELDADSFCLLDECGHYCCVECM-RYHCEMHVKNGTVMQLLC 365
Query: 179 AAHACDILVDDATVMRLVRDSRVKLKYQHIITNSFVECNRLLRWCPSPDCSNAIKVAYVE 238
H C++ + T+ ++ + + +Y+ ++ + ++ + +CP C +A+ E
Sbjct: 366 PIHKCEVPISPYTLQEVLPED-LYTRYERLMLSKTLDLMGDIYYCPR--CHSAVVADEEE 422
Query: 239 AAPVT-CR-CGHTFCFACGENWHDPVRC 264
++ + C C + FC C WH C
Sbjct: 423 SSHLAHCAVCFYAFCTECQGAWHHGKSC 450
>SB_32622| Best HMM Match : Ank (HMM E-Value=2.2e-05)
Length = 509
Score = 48.4 bits (110), Expect = 1e-05
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 131 EECEICFSVLPTS--IMTGLECGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHACDILVD 188
E C IC L + + L CGH C CW YL KI +G I C A+ C+ LV
Sbjct: 204 EPCMICSDDLTGADVLPVALPCGHEACCLCWERYLNVKI-RDGEAHNILCPAYNCNTLVP 262
Query: 189 DATVMRLV 196
T+ +LV
Sbjct: 263 LETIEKLV 270
>SB_59145| Best HMM Match : Keratin_B2 (HMM E-Value=0.0012)
Length = 489
Score = 45.2 bits (102), Expect = 1e-04
Identities = 38/154 (24%), Positives = 59/154 (38%), Gaps = 17/154 (11%)
Query: 178 CAAHACDILVDDATVMRLVRDSRVKLKYQHIIT--NSFV---ECNRLLR------WCPSP 226
C A C++ D T ++ R R ++ + + F +CN + + CPS
Sbjct: 279 CVAGECEMDCDSKTCFQIARGGRTTMRCSPTVDKCHQFCPGGDCNLICQAKLCYPHCPSG 338
Query: 227 DCSNAIKVAYVEAAPVTCRCGHTFCFACGENWHDPVRCCLLRKW---IKKCDDDSETSNW 283
C + + A P RC C +N H R C+ R++ CD +
Sbjct: 339 GCVTSNIKPRIVALPTRVRC-EVISGGCSQNCHTK-RSCICRRFSALFHSCDQLCYEGSC 396
Query: 284 IAANTKECPKCNVTIEKDGGCNHMVCKNQNCKAD 317
+ KCN E DG C M+CK+ C D
Sbjct: 397 RSMKCYSLNKCNQVCE-DGRCQLMLCKSDLCVQD 429
>SB_55976| Best HMM Match : zf-C3HC4 (HMM E-Value=0.087)
Length = 171
Score = 39.9 bits (89), Expect = 0.005
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 124 RISTSGMEECEICFSVLPTSIMTGLE-CGHRFCTQCWCEYLTTKIMEEGLGQTIAC 178
R+ + C++CFS P S+ CGH FC +C Y T +I +G + + C
Sbjct: 112 RVFDTSYFTCDVCFSEKPGSMCLAFHNCGHVFCCECMTGYFTVQI-NDGSVKALTC 166
>SB_56543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1076
Score = 39.5 bits (88), Expect = 0.006
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Query: 291 CPKCNVTIEKDGGCNHMVCKNQNCKADFCWVCLGP-WEP-HGSSW 333
CP+C + + K GC+ M C C+ + CW GP W P + + W
Sbjct: 694 CPQCQIILLKKDGCDWMRC--SMCRMEICWATRGPRWGPQYETGW 736
>SB_35379| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 38.3 bits (85), Expect = 0.014
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 13 SGNES-SGDDVDFAMDVETHSTRERQTELEEYPYEVLSTEEIVQHMVDCIKEVN 65
SG+ES S ++ DF +D E ST +R +++ YE L+ E +V +M + I +VN
Sbjct: 17 SGDESHSEENSDFDIDCEEPSTPKRAHVNDDFHYECLTPEALVSYMNEIIDDVN 70
>SB_40225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1442
Score = 37.5 bits (83), Expect = 0.025
Identities = 30/132 (22%), Positives = 49/132 (37%), Gaps = 8/132 (6%)
Query: 132 ECEICFSVLPTSIM-TGLECGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHACDILVDDA 190
EC +C + P + M T L C RFC+ C +Y+ I E+ + + A L DD
Sbjct: 1004 ECIVCMDLKPENRMITMLNCQCRFCSDCVSQYVKQIIQEQNIMHLVCPACSEPKNLEDDT 1063
Query: 191 TVMRLVRDSRVKLKYQHIITNSFVECNRLLRW--CPSPDCSNAIKVAYVEAAPVTC-RCG 247
+ + QH + C + W P+ A+++ + C C
Sbjct: 1064 VATNYFNLLDILWEDQH----EGISCEQFAAWKEANDPEAQATGLAAHLKQNGIECPNCK 1119
Query: 248 HTFCFACGENWH 259
+ A G H
Sbjct: 1120 FRYDLAKGGCMH 1131
>SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 301
Score = 36.7 bits (81), Expect = 0.044
Identities = 31/110 (28%), Positives = 39/110 (35%), Gaps = 20/110 (18%)
Query: 117 QRPKLPRRISTSGMEECEICFSVLPTSIMTGLECGHRFCTQCWCEYLTTKIMEEGLGQTI 176
+ P+ R +S C IC VL I T C H FC C CE+L + G
Sbjct: 144 EMPETERFVSPPDFVFCAICKEVLTQPIAT--PCDHYFCVLCICEWLDQTYNKSG----- 196
Query: 177 ACAAHACDILVDDATVMRLVRDSRVKLKYQHIITNSFVECNRLLRWCPSP 226
C I S V K Q ++ N+ C L R C P
Sbjct: 197 -CPVCKASI------------SSNVLHKIQRVLGNTLASCQVLCRSCKEP 233
>SB_12737| Best HMM Match : C_tripleX (HMM E-Value=0.027)
Length = 442
Score = 35.5 bits (78), Expect = 0.10
Identities = 34/145 (23%), Positives = 54/145 (37%), Gaps = 17/145 (11%)
Query: 178 CAAHACDILVDDATVMRLVRDSRVKLKYQHII--TNSFV---ECNRLLR------WCPSP 226
C A C++ D T ++ R R ++ + + F +CN + + CPS
Sbjct: 279 CVAGECEMDCDSKTCFQIARGGRTTMRCSPTVDKCHQFCPGGDCNLICQAKLCYPHCPSG 338
Query: 227 DCSNAIKVAYVEAAPVTCRCGHTFCFACGENWHDPVRCCLLRKW---IKKCDDDSETSNW 283
C + + A P RC C +N H R C+ R++ CD +
Sbjct: 339 GCVTSNIKPRIVALPTRVRC-EVISGGCSQNCHTK-RSCICRRFSALFHSCDQLCYEGSC 396
Query: 284 IAANTKECPKCNVTIEKDGGCNHMV 308
+ KCN E DG C M+
Sbjct: 397 RSMKCYSLNKCNQVCE-DGRCQLML 420
>SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 35.1 bits (77), Expect = 0.13
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 132 ECEICFSVLPTSIMTGLECGHRFCTQCWCEYL 163
+C ICF VL ++T CGH FC+QC ++
Sbjct: 56 KCGICFGVLEDPLVT--TCGHVFCSQCLVHWI 85
>SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 466
Score = 33.9 bits (74), Expect = 0.31
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 117 QRPKLPRRISTSGMEECEICFSVLPTSIMTGLECGHRFCTQCWCEYLTTKIMEEG 171
+ P+ R + C IC VL I T C H FC C CE+L + G
Sbjct: 144 EMPETERFVCPPDFVFCAICKEVLTQPIAT--PCDHYFCVLCICEWLDQTYNKSG 196
>SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 301
Score = 33.9 bits (74), Expect = 0.31
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 117 QRPKLPRRISTSGMEECEICFSVLPTSIMTGLECGHRFCTQCWCEYLTTKIMEEG 171
+ P+ R + C IC VL I T C H FC C CE+L + G
Sbjct: 144 EMPETERFVCPPDFVFCAICKEVLTQPIAT--PCDHYFCVLCICEWLDQTYNKSG 196
>SB_39137| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 33.5 bits (73), Expect = 0.41
Identities = 23/111 (20%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 382 YASVKEKMEEMQQHNMSWIEVQFLKKAVDILCQCRQTLMYTYVFA---YYLRKNNQSVIF 438
+ S++++++ + +Q D+ Q +QT Y A Y + + F
Sbjct: 125 FQSLRDEIKNKNIEEKHALRIQLEGTVEDLWRQFQQTAFLIYKQALKNYNETTEERKLAF 184
Query: 439 ED-NQRDLESATETLSEYLERDITSENLADIKQKVQDKYRYCDSRRKVLLE 488
E+ +D +SA E ++ + +N++ +K K+ R CD R +++ E
Sbjct: 185 ENLKAKDEKSAKEIETQMRKLQRIQDNISQLKAKMASNARECDERNRMIKE 235
>SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 262
Score = 33.5 bits (73), Expect = 0.41
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Query: 117 QRPKLPRRISTSGMEECEICFSVLPTSIMTGLECGHRFCTQCWCEYLTTKIMEEG 171
+ P+ R + C IC VL I T C H FC C CE+L + G
Sbjct: 18 EMPETGRFVCPPDFVFCAICKEVLTQPIAT--PCDHYFCVLCICEWLDQTYNKSG 70
>SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07)
Length = 306
Score = 33.5 bits (73), Expect = 0.41
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 133 CEICFSVLPTSIMTGLECGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHACDILVDDATV 192
C IC VL +++T CGH FC C ++ K +EE +C + D+ D
Sbjct: 18 CGICAEVLERAVLT--PCGHSFCGVCLETWMNAK-LEENEKCPASCPSCRADLYQGDTIP 74
Query: 193 MRLVR 197
+ +R
Sbjct: 75 VLALR 79
>SB_20056| Best HMM Match : zf-C3HC4 (HMM E-Value=9e-11)
Length = 471
Score = 33.1 bits (72), Expect = 0.54
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 241 PVTCRCGHTFCFACGENWHDPVRCCLLRKWIKKCDDDSETSNWIAAN--TKECPKCN 295
PVT CGHT+C AC ++ C +K K ++S + N + N +K P C+
Sbjct: 32 PVTILCGHTYCLACIKDEFTGKNC---KKCGFKITEESNSVNILLCNIISKWFPSCS 85
Score = 32.7 bits (71), Expect = 0.71
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 8/71 (11%)
Query: 132 ECEICFSVLPTSIMTGLECGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHACDILVDDAT 191
EC++CF++L + T L CGH FC C L ++ + C A IL +
Sbjct: 329 ECKLCFNLLLEPV-TSL-CGHSFCRDCLYRSLDHRV------ECPCCRAPLTKILAERRQ 380
Query: 192 VMRLVRDSRVK 202
+ V D +K
Sbjct: 381 AVTSVLDGMIK 391
>SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21)
Length = 380
Score = 32.7 bits (71), Expect = 0.71
Identities = 20/48 (41%), Positives = 23/48 (47%), Gaps = 6/48 (12%)
Query: 125 ISTSGMEECEICFSVLPTSIMTGLECGHRFCTQCWCEYLTTKIMEEGL 172
+S+ EEC IC L +T C H FCT C LT I EGL
Sbjct: 57 LSSGVSEECPICLDPLDDPSIT--RCAHVFCTGC----LTDVIENEGL 98
>SB_2351| Best HMM Match : zf-C3HC4 (HMM E-Value=4e-07)
Length = 137
Score = 32.3 bits (70), Expect = 0.94
Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
Query: 95 DGDQDQLFSEARVINPFRKPVIQRPKLPRRISTSGMEECEICFSVLPTSIMTGLECGHRF 154
+ D+D++ +V P K ++P R C +C + + + ECGHR
Sbjct: 22 NNDEDKMPEIEKVERPLTKNYFKKPPFEER-----KHLCPVCEDIFVSPVQIK-ECGHRL 75
Query: 155 CTQCW 159
C C+
Sbjct: 76 CQHCY 80
>SB_5871| Best HMM Match : IBR (HMM E-Value=0.00018)
Length = 843
Score = 32.3 bits (70), Expect = 0.94
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 276 DDSETSNWIAANTKECPKCNVTIEKDG 302
+D E + I +K CPKCNV EK G
Sbjct: 113 EDQEAQDLIRRISKPCPKCNVPTEKSG 139
Score = 29.9 bits (64), Expect = 5.0
Identities = 27/86 (31%), Positives = 32/86 (37%), Gaps = 11/86 (12%)
Query: 226 PDCSNAIKVAYVEAAPVTCRCGHTFCFAC----GENWHDPVRC--CLLRKWIKKCDDDSE 279
P C A Y + P C HTFC C E D V C C LR + D +
Sbjct: 331 PLCYTAYGTGYPQRIPRILDCSHTFCTECIMKIKELQGDVVECPTCKLRTLLTSSVDCLK 390
Query: 280 TSNWI-----AANTKECPKCNVTIEK 300
+ I AA +E P CN K
Sbjct: 391 KNMDILTAVFAAEQEEEPVCNFCASK 416
>SB_58465| Best HMM Match : zf-B_box (HMM E-Value=0.00022)
Length = 476
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 193 MRLVRDSRVKLKYQHIITNSFVECNRL---LRWCPSPDCSNAIKVAYVEAAPVTCRCGHT 249
++L+R S++ + ++ + +C+R+ LR C N +A P CGHT
Sbjct: 107 IKLLR-SKICQTLEVLLLGFYPDCSRIMDDLRGMCCSVCYNPFHATESQAIPRNLNCGHT 165
Query: 250 FCFAC 254
+C C
Sbjct: 166 YCTGC 170
>SB_57496| Best HMM Match : TSP_1 (HMM E-Value=3.2e-13)
Length = 609
Score = 31.5 bits (68), Expect = 1.6
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Query: 247 GHTFCF-ACGENWHDPVRCCLLRKWIKKCDDDSETSNWIAANTKECPKCNV 296
G T C CG W R C + KKCD D + NT+ CPK V
Sbjct: 257 GFTKCTKTCGGGWRKRTRRCHTTEPGKKCDQDLLIGIQV-CNTQPCPKQRV 306
>SB_45659| Best HMM Match : E_Pc_C (HMM E-Value=1.2)
Length = 1244
Score = 31.5 bits (68), Expect = 1.6
Identities = 19/63 (30%), Positives = 27/63 (42%)
Query: 339 YDEDEAKAARDAQERSRAALQRYLFYCNRYMNHMQSLRFESKLYASVKEKMEEMQQHNMS 398
YD+D+ K + + L + + H + KL SVK K EE Q+ N
Sbjct: 309 YDKDDQKHKKPKKRHKSPERVVRLSHKKKKKKHKSKHSRKDKLAPSVKYKNEEHQKPNTI 368
Query: 399 WIE 401
WIE
Sbjct: 369 WIE 371
>SB_44951| Best HMM Match : TSP_1 (HMM E-Value=3.2e-13)
Length = 366
Score = 31.5 bits (68), Expect = 1.6
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Query: 247 GHTFCF-ACGENWHDPVRCCLLRKWIKKCDDDSETSNWIAANTKECPKCNV 296
G T C CG W R C + KKCD D + NT+ CPK V
Sbjct: 257 GFTKCTKTCGGGWRKRTRRCHTTEPGKKCDQDLLIGIQV-CNTQPCPKQRV 306
>SB_41313| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 31.5 bits (68), Expect = 1.6
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Query: 345 KAARDAQERSRAALQRYLFYCNRYMNHMQSLRFESKLYASVKEKMEEMQQHNMSWIEVQF 404
+ A +E R + +R CN Y + SL SKLY +E +EE N +E
Sbjct: 62 RIAGQVEEAERES-KRLRELCNDYEMEISSLN--SKLYGLERELLEEQSVSNAKDLENAN 118
Query: 405 LKKAVDILCQCRQTLMYTYVF 425
L+ V +L +TL Y F
Sbjct: 119 LRYEVGVLQGREETLRMEYDF 139
>SB_2797| Best HMM Match : YscO (HMM E-Value=2.8)
Length = 246
Score = 31.5 bits (68), Expect = 1.6
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 345 KAARDAQERSRAALQRYLFYCNRYMNHMQSLRFESKLYASVKEKMEEMQQHNMSWIEVQF 404
+ A +E R + R L CN + + SL SK+Y +E +EE N +E+
Sbjct: 59 RIAGQVEEAERES-NRLLELCNDHETEISSLN--SKVYGLERELLEEQSVSNAKDLEIAN 115
Query: 405 LKKAVDILCQCRQTLMYTY 423
L V +L +TL Y
Sbjct: 116 LNYQVSVLEGREETLRMEY 134
>SB_15859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 970
Score = 31.5 bits (68), Expect = 1.6
Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Query: 18 SGDDVDFAMDVETHSTRERQTEL-EEYPYEVLSTEEIVQHMVDCIKEVNTVVEIPATTTR 76
SG ++ D + +ER+ E+ Y L E +H+ D +K+V +
Sbjct: 31 SGQEIIHKGDSAVDAAKEREEPTAEQLQYAKLLNNEDQKHIQDQLKQVADMTGRSIDEAS 90
Query: 77 ILLNHFKWDKEKLMERFYDGDQDQ 100
+ L+ +D E+ + ++G DQ
Sbjct: 91 VALHDCNYDTEQAINTLFEGKVDQ 114
>SB_4328| Best HMM Match : Vicilin_N (HMM E-Value=0.39)
Length = 738
Score = 31.5 bits (68), Expect = 1.6
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 15 NESSGDDVDFAMDVETHSTRERQT----ELEEYPYEVLST-EEIVQHMVDCIKEVNTVVE 69
+E S +DV ++ VE H +++ E++ P E+ + EE VQH + I+E TV+E
Sbjct: 293 DEPSDEDVTESLRVEDHEKYSKKSLASYEIDLSPDELFAIHEEGVQHKISSIREKMTVIE 352
>SB_43138| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.3e-14)
Length = 1709
Score = 31.1 bits (67), Expect = 2.2
Identities = 33/159 (20%), Positives = 69/159 (43%), Gaps = 3/159 (1%)
Query: 338 RYDEDEAKAARDAQERSRAALQRYLFYCNRYMNHMQSLRFESKLYASVKEKMEEMQQHNM 397
+Y+ED K + +E +R ++Y + M M+ ++ ++ ++K + +Q ++
Sbjct: 590 QYEEDIVKGRSELEETNRTLKEKYESEVSEIMLQMEQVQQRNQEVFEAQQKEQFEKQLSL 649
Query: 398 SWIEVQFLKKAVDILCQCRQTLMYTYVFAYYLRKNNQSVIFEDNQRDLESATETLSEYLE 457
E+Q K L Q + LM Y KN + E+ + E+ E + LE
Sbjct: 650 VKDELQPYKSKCQELEQENKELMEKYERDLSELKNKMDEV-EERYKMTENIEEEGMKTLE 708
Query: 458 RDITSENLADIKQKVQDKYRYCDSRRKVLLEHVHEGYEK 496
++ A +K+ ++D R LE++ Y++
Sbjct: 709 HELQIYK-AKVKE-LEDGNRMLVENYGAQLENMKRKYDE 745
>SB_14437| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 31.1 bits (67), Expect = 2.2
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 18 SGDDVDFAMDVETHSTRERQTELEEYPYEVLSTEEIVQHMVDCIKEVNT 66
SGDD+ + +HST E + EL+ E +E+++H + + V T
Sbjct: 155 SGDDLPHGLRSTSHSTEELRMELKLLDSEEKHLDELIEHAREELTSVKT 203
>SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 346
Score = 30.7 bits (66), Expect = 2.9
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 133 CEICFSVLPTSIMTGLECGHRFCTQC 158
C IC VL +I T CGH FC C
Sbjct: 18 CNICVGVLENAITT--ICGHSFCESC 41
Score = 29.5 bits (63), Expect = 6.6
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 232 IKVAYVEAAPVTCRCGHTFCFACGENW 258
I V +E A +T CGH+FC +C E W
Sbjct: 20 ICVGVLENA-ITTICGHSFCESCLETW 45
>SB_40137| Best HMM Match : M-inducer_phosp (HMM E-Value=0.68)
Length = 458
Score = 30.3 bits (65), Expect = 3.8
Identities = 18/77 (23%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 26 MDVETHSTRERQTELEEYPYEVLS-TEEIVQHMVDCIKEVNTVVEIPATTTRILLNHFKW 84
+ + +H T + TE E++ + +E+VQ +VD + + + + T++L + +
Sbjct: 259 LQLTSHQTSDTGTE-EDFLQRMRDRNDELVQKLVDMLSDKSEALAHQKVATKMLASKIR- 316
Query: 85 DKEKLMERFYDGDQDQL 101
++EK ++RF D + L
Sbjct: 317 EQEKQLKRFQTQDVEDL 333
>SB_10780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 30.3 bits (65), Expect = 3.8
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Query: 116 IQRPKLPRRISTSGMEECEICFSVLPTSIMTGLECGHRFC 155
IQ P+ PR S +C +C + +T CGH FC
Sbjct: 85 IQAPEPPRAFSND--RQCPVC--ITDARFLTMTNCGHEFC 120
>SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19)
Length = 320
Score = 30.3 bits (65), Expect = 3.8
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
Query: 226 PDCSNAIKVAYVEAAPVTCRCGHTFCFAC 254
PDC ++ A + PV CGH FCF C
Sbjct: 69 PDCPVCLQQA---SYPVRLPCGHMFCFLC 94
>SB_52478| Best HMM Match : NHL (HMM E-Value=1e-27)
Length = 1387
Score = 29.9 bits (64), Expect = 5.0
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 133 CEICFSVLPTSIMTGLECGHRFCTQCWCEYLTTKIMEE 170
C C S P + CG CT+CW + K+++E
Sbjct: 741 CGSCDSKSPL-VCYCFHCGEFLCTECWSAHKLVKVLKE 777
>SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 29.9 bits (64), Expect = 5.0
Identities = 32/153 (20%), Positives = 66/153 (43%), Gaps = 7/153 (4%)
Query: 338 RYDEDEAKAARDAQERSRAALQRYLFYCNRYMNHMQSLRFESKLYASVKEKMEEMQQHNM 397
R D +E + A+ +ER Q L R + ++ +++ A ++ E +Q+
Sbjct: 183 RIDRNEQRLAKLEKERKEREQQELLLEQQRELELLRQKYSDAEAQAILEA--ENLQEEKR 240
Query: 398 SWIEVQFLKKAVDILCQCRQTLMYTYVFAYYLRKNNQSVIFEDNQR--DLESATETLSEY 455
E++ L + + + + A L+ + ++ E+ +R +LE E +
Sbjct: 241 RREELERLHQELQNILLAEKEAREAETNARALQ---EKLLEEEKKRLEELERLKEEKDKM 297
Query: 456 LERDITSENLADIKQKVQDKYRYCDSRRKVLLE 488
LE ++ + KQK+QDK + +R LE
Sbjct: 298 LEEELKKRETLEEKQKLQDKILEEERKRLENLE 330
>SB_6600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 29.9 bits (64), Expect = 5.0
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 21 DVDFAMDVETHSTRERQTELEEYPYEVLSTEEI-VQHMVDCIKEVNTVVEIPATTTRILL 79
+V+ M+VET E + E+E EV + +E+ + V+ KEV T E+ T + +
Sbjct: 14 EVETEMEVETEMEVETEKEVET-EKEVETEKEVETEKEVETEKEVETKKEV--ETEKEVE 70
Query: 80 NHFKWDKEKLMERFYDGDQDQLFSEARV 107
KW +E +R G + ++ +E V
Sbjct: 71 GSRKWRREGSGDRERSGGEKEVETEKEV 98
>SB_31692| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 598
Score = 29.5 bits (63), Expect = 6.6
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Query: 132 ECEICFSVLPTSIMTGLECGHRFCTQC 158
EC IC I ECGHRFC C
Sbjct: 25 ECPICQLAFRDPIQIE-ECGHRFCQSC 50
>SB_22639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 29.5 bits (63), Expect = 6.6
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 9/58 (15%)
Query: 132 ECEICFSVLPTSIMTGLECGHRFCTQCWCEYLTTKIME-EGLGQTIACAAHACDILVD 188
EC +C P+ L+C H FC +C LT K E +G G+T +C +C +D
Sbjct: 97 ECSLCHKT-PSEPKI-LKCFHTFCNEC----LTEKSAEFKGDGETFSCP--SCKTRID 146
>SB_39478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 29.5 bits (63), Expect = 6.6
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 132 ECEICFSVLPTSIMTGLECGHRFCTQCWCEYLTTK 166
EC IC ++++ CGH FC C +L T+
Sbjct: 62 ECNICLDTARDAVIS--MCGHLFCWPCLHRWLETR 94
>SB_5147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 29.5 bits (63), Expect = 6.6
Identities = 18/75 (24%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 369 MNHMQSLRFESKLYASVKEKMEEMQQH---NMSWIEVQFLKKAVDILCQCRQTLMYTYVF 425
+N +QS + K+ +++KE++ +++H + SWI Q L+ +D + + + +
Sbjct: 138 LNRLQSGKTLKKVESALKEQVRPLERHIIADRSWISEQELED-IDEEIRRLELWLSRKIL 196
Query: 426 AYYLRKNNQSVIFED 440
+ L K +S++ ED
Sbjct: 197 KHQLEKRRKSLLTED 211
>SB_53505| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 29.1 bits (62), Expect = 8.7
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 378 ESKLYASVKEKMEEMQQHNMSWIEVQFLKKAVDILCQCRQTLMYTYVFAYYLRKNNQSVI 437
ES++ +EKM E+ +H + W +V K V +LC+ R+ Y RK +Q
Sbjct: 243 ESRVTEVFREKMLELYEHEIPW-QV----KQVPVLCELREGNKLRIHQKLYCRKKSQRKC 297
Query: 438 FEDNQRDLES 447
+ LE+
Sbjct: 298 VLEKVETLET 307
>SB_45112| Best HMM Match : YscO (HMM E-Value=3)
Length = 247
Score = 29.1 bits (62), Expect = 8.7
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 345 KAARDAQERSRAALQRYLFYCNRYMNHMQSLRFESKLYASVKEKMEEMQQHNMSWIEVQF 404
+ A +E R + R CN + + SL SK+Y +E +EE N +E+
Sbjct: 62 RIAGQVEEAERES-NRLRELCNDHETEISSLN--SKVYGLERELLEEQSVSNAKDLEIAN 118
Query: 405 LKKAVDILCQCRQTLMYTY 423
L V +L +TL Y
Sbjct: 119 LNYQVSVLEGREETLRMEY 137
>SB_41761| Best HMM Match : DNA_pol_B_2 (HMM E-Value=0.025)
Length = 1480
Score = 29.1 bits (62), Expect = 8.7
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 8/102 (7%)
Query: 265 CLLRKWIKKC-DDDSETSNWIAANTKECPKCNVTIEKDGGCNHMVCKNQNCKADFCWVCL 323
CL W KK + SE + A E PK I+KDG H+ KN N K +V
Sbjct: 438 CLNPFWCKKALEKHSEYCDNHEAVRIEMPK----IDKDGNLPHIKFKNYNRKMRVPFVVY 493
Query: 324 GPWEPHGSSWYSCNRYDEDEAKAARDAQERSRAALQRYLFYC 365
+E + +C+ DE+K+ + + + YL C
Sbjct: 494 ADFESFTENIDTCS---PDESKSFTKQYQEHKPSGFCYLIKC 532
>SB_33568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1555
Score = 29.1 bits (62), Expect = 8.7
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 224 PSPDCSNAIKVAYVEAAPVTCRCGHTFCFACGENWHD 260
PS D AI V+ P+ CGH++C C + W +
Sbjct: 24 PSDDSMCAICHIVVKD-PILTSCGHSYCKCCIQKWRN 59
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.322 0.134 0.433
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,913,063
Number of Sequences: 59808
Number of extensions: 779741
Number of successful extensions: 2306
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 2198
Number of HSP's gapped (non-prelim): 101
length of query: 503
length of database: 16,821,457
effective HSP length: 85
effective length of query: 418
effective length of database: 11,737,777
effective search space: 4906390786
effective search space used: 4906390786
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 62 (29.1 bits)
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