Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001417-TA|BGIBMGA001417-PA|IPR002867|Zinc finger,
C6HC-type, IPR001841|Zinc finger, RING-type
(503 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g16090.1 68415.m01845 zinc finger protein-related contains si... 277 1e-74
At4g34370.1 68417.m04883 IBR domain-containing protein similar t... 269 3e-72
At1g05890.1 68414.m00617 zinc finger protein-related contains lo... 254 1e-67
At3g27710.1 68416.m03460 zinc finger protein-related contains si... 250 2e-66
At1g65430.1 68414.m07423 zinc finger protein-related contains we... 247 2e-65
At2g31510.1 68415.m03850 IBR domain-containing protein / ARIADNE... 245 5e-65
At2g31760.1 68415.m03878 zinc finger protein-related contains lo... 236 2e-62
At2g31770.1 68415.m03879 zinc finger (C3HC4-type RING finger) fa... 234 1e-61
At2g31780.1 68415.m03880 zinc finger (C3HC4-type RING finger) fa... 218 8e-57
At3g27720.1 68416.m03461 zinc finger protein-related contains Pf... 180 2e-45
At5g08730.1 68418.m01037 IBR domain-containing protein contains ... 145 7e-35
At5g63750.1 68418.m08001 IBR domain-containing protein contains ... 112 6e-25
At5g63760.2 68418.m08003 IBR domain-containing protein contains ... 103 3e-22
At5g63760.1 68418.m08002 IBR domain-containing protein contains ... 103 3e-22
At5g63730.1 68418.m07999 IBR domain-containing protein contains ... 95 7e-20
At5g10370.1 68418.m01203 helicase domain-containing protein / IB... 89 8e-18
At5g60250.1 68418.m07552 zinc finger (C3HC4-type RING finger) fa... 85 1e-16
At4g01020.1 68417.m00137 helicase domain-containing protein / IB... 83 3e-16
At2g26135.1 68415.m03136 zinc finger (C3HC4-type RING finger) fa... 82 7e-16
At3g53690.1 68416.m05929 zinc finger (C3HC4-type RING finger) fa... 79 5e-15
At4g19670.1 68417.m02889 zinc finger (C3HC4-type RING finger) fa... 72 1e-12
At3g45580.1 68416.m04923 zinc finger (C3HC4-type RING finger) fa... 71 2e-12
At1g32340.1 68414.m03985 zinc finger (C3HC4-type RING finger) fa... 71 2e-12
At3g45470.1 68416.m04910 zinc finger protein-related contains lo... 69 7e-12
At3g43750.1 68416.m04674 zinc finger (C3HC4-type RING finger) fa... 69 7e-12
At3g45555.1 68416.m04920 zinc finger (C3HC4-type RING finger) fa... 69 1e-11
At2g26130.1 68415.m03135 zinc finger (C3HC4-type RING finger) fa... 67 3e-11
At3g45540.1 68416.m04918 zinc finger (C3HC4-type RING finger) fa... 66 4e-11
At3g14250.1 68416.m01804 zinc finger protein-related contains we... 64 2e-10
At2g19610.2 68415.m02291 zinc finger (C3HC4-type RING finger) fa... 63 5e-10
At2g25360.1 68415.m03035 zinc finger protein-related contains we... 62 6e-10
At2g25370.1 68415.m03037 zinc finger protein-related contains we... 55 1e-07
At3g45570.1 68416.m04922 zinc finger (C3HC4-type RING finger) fa... 54 2e-07
At3g45510.1 68416.m04914 zinc finger (C3HC4-type RING finger) fa... 52 7e-07
At2g21420.1 68415.m02549 zinc finger protein-related contains lo... 52 7e-07
At2g19610.1 68415.m02290 zinc finger (C3HC4-type RING finger) fa... 50 3e-06
At3g45480.1 68416.m04911 zinc finger (C3HC4-type RING finger) fa... 47 3e-05
At2g25380.1 68415.m03039 zinc finger protein-related very low si... 45 1e-04
At5g37560.1 68418.m04523 zinc finger protein-related contains we... 42 0.001
At1g05880.1 68414.m00616 expressed protein 42 0.001
At5g63740.1 68418.m08000 zinc finger protein-related 40 0.005
At3g45560.1 68416.m04921 zinc finger (C3HC4-type RING finger) fa... 37 0.027
At5g07640.1 68418.m00875 zinc finger (C3HC4-type RING finger) fa... 36 0.063
At1g11100.1 68414.m01271 SNF2 domain-containing protein / helica... 36 0.063
At5g22750.1 68418.m02657 SNF2 domain-containing protein / helica... 34 0.25
At2g44900.1 68415.m05589 armadillo/beta-catenin repeat family pr... 34 0.25
At2g40770.1 68415.m05030 SNF2 domain-containing protein / helica... 34 0.25
At5g47430.1 68418.m05844 expressed protein 33 0.44
At4g08590.1 68417.m01412 zinc finger (C3HC4-type RING finger) fa... 33 0.44
At1g66050.1 68414.m07497 zinc finger (C3HC4-type RING finger) fa... 33 0.44
At1g66040.1 68414.m07495 zinc finger (C3HC4-type RING finger) fa... 33 0.44
At1g18660.4 68414.m02326 zinc finger (C3HC4-type RING finger) fa... 33 0.44
At1g18660.3 68414.m02329 zinc finger (C3HC4-type RING finger) fa... 33 0.44
At1g18660.2 68414.m02328 zinc finger (C3HC4-type RING finger) fa... 33 0.44
At1g18660.1 68414.m02327 zinc finger (C3HC4-type RING finger) fa... 33 0.44
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 33 0.44
At5g44280.1 68418.m05420 zinc finger (C3HC4-type RING finger) fa... 33 0.58
At5g39550.1 68418.m04791 zinc finger (C3HC4-type RING finger) fa... 33 0.58
At5g01960.1 68418.m00115 zinc finger (C3HC4-type RING finger) fa... 33 0.58
At4g35030.1 68417.m04969 protein kinase family protein contains ... 32 0.77
At4g27470.1 68417.m03947 zinc finger (C3HC4-type RING finger) fa... 32 0.77
At3g60350.1 68416.m06749 armadillo/beta-catenin repeat family pr... 32 0.77
At3g20010.1 68416.m02531 SNF2 domain-containing protein / helica... 32 1.0
At3g43180.1 68416.m04557 zinc finger (C3HC4-type RING finger) fa... 31 1.3
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 31 1.3
At2g23780.1 68415.m02840 zinc finger (C3HC4-type RING finger) fa... 31 1.3
At1g63430.1 68414.m07173 leucine-rich repeat transmembrane prote... 31 1.3
At3g26730.1 68416.m03342 zinc finger (C3HC4-type RING finger) fa... 31 1.8
At1g03770.1 68414.m00357 zinc finger (C3HC4-type RING finger) fa... 31 1.8
At5g43530.1 68418.m05322 SNF2 domain-containing protein / helica... 31 2.4
At2g22660.1 68415.m02685 glycine-rich protein 31 2.4
At1g06730.1 68414.m00715 pfkB-type carbohydrate kinase family pr... 31 2.4
At5g53910.1 68418.m06708 (S)-2-hydroxy-acid oxidase, peroxisomal... 30 3.1
At5g18420.3 68418.m02170 expressed protein non-consensus GC dono... 30 3.1
At5g18420.2 68418.m02169 expressed protein non-consensus GC dono... 30 3.1
At5g18420.1 68418.m02168 expressed protein non-consensus GC dono... 30 3.1
At1g67180.1 68414.m07642 zinc finger (C3HC4-type RING finger) fa... 30 3.1
At4g03510.2 68417.m00479 zinc finger (C3HC4-type RING finger) fa... 30 4.1
At4g03510.1 68417.m00478 zinc finger (C3HC4-type RING finger) fa... 30 4.1
At2g38920.1 68415.m04784 SPX (SYG1/Pho81/XPR1) domain-containing... 30 4.1
At2g26350.1 68415.m03163 zinc-binding peroxisomal integral membr... 30 4.1
At1g02860.1 68414.m00251 SPX (SYG1/Pho81/XPR1) domain-containing... 30 4.1
At3g24800.1 68416.m03112 PRT1 protein (PRT1) E3, N-end rule ubiq... 29 5.4
At2g24480.1 68415.m02925 zinc finger (C3HC4-type RING finger) fa... 29 5.4
At1g66860.1 68414.m07599 expressed protein similar to Hypothetic... 29 5.4
At1g47570.1 68414.m05281 zinc finger (C3HC4-type RING finger) fa... 29 5.4
At1g19310.1 68414.m02401 zinc finger (C3HC4-type RING finger) fa... 29 5.4
At4g12150.1 68417.m01930 zinc finger (C3HC4-type RING finger) fa... 29 7.2
At4g12140.1 68417.m01928 zinc finger (C3HC4-type RING finger) fa... 29 7.2
At4g10940.1 68417.m01779 PHD finger family protein contains Pfam... 29 7.2
At1g78420.1 68414.m09138 expressed protein 29 7.2
At1g57820.2 68414.m06561 zinc finger (C3HC4-type RING finger) fa... 29 7.2
At1g57820.1 68414.m06560 zinc finger (C3HC4-type RING finger) fa... 29 7.2
At1g45180.1 68414.m05180 zinc finger (C3HC4-type RING finger) fa... 29 7.2
At5g65710.1 68418.m08270 leucine-rich repeat transmembrane prote... 29 9.5
At4g28270.1 68417.m04049 zinc finger (C3HC4-type RING finger) fa... 29 9.5
At3g01650.1 68416.m00096 copine-related low similarity to SP|Q99... 29 9.5
At2g01620.1 68415.m00088 expressed protein 29 9.5
At1g73760.1 68414.m08540 zinc finger (C3HC4-type RING finger) fa... 29 9.5
At1g67800.3 68414.m07738 copine-related low similarity to SP|Q99... 29 9.5
At1g67800.2 68414.m07739 copine-related low similarity to SP|Q99... 29 9.5
At1g67800.1 68414.m07737 copine-related low similarity to SP|Q99... 29 9.5
At1g50410.1 68414.m05650 SNF2 domain-containing protein / helica... 29 9.5
>At2g16090.1 68415.m01845 zinc finger protein-related contains
similarity to zinc finger proteins and Pfam domain,
PF01485: IBR domain
Length = 593
Score = 277 bits (679), Expect = 1e-74
Identities = 157/475 (33%), Positives = 246/475 (51%), Gaps = 40/475 (8%)
Query: 46 EVLSTEEIVQHMVDCIKEVNTVVEIPATTTRILLNHFKWDKEKLMERFYDGDQDQLFSEA 105
+V++ E ++ + ++ V ++ + R LL H++WD EKL + +D LFS A
Sbjct: 42 KVITKESLLAAQREDLRRVMELLSVKEHHARTLLIHYRWDVEKLFAVLVEKGKDSLFSGA 101
Query: 106 RVINPFRKPVIQRPKLPRRIS-TSGMEECEICFSVLPTSIMTGLECGHRFCTQCWCEYLT 164
V +++ +S +S M C+IC +P +T ++CGH FC CW + T
Sbjct: 102 GVT------LLENQSCDSSVSGSSSMMSCDICVEDVPGYQLTRMDCGHSFCNNCWTGHFT 155
Query: 165 TKIMEEGLGQTIACAAHACDILVDDATVMRLVRDSRVKL--KYQHIITNSFVECNRLLRW 222
KI EG + I C AH C+ + D+ V LV S+ L K+ + S++E N++++W
Sbjct: 156 VKI-NEGQSKRIICMAHKCNAICDEDVVRALVSKSQPDLAEKFDRFLLESYIEDNKMVKW 214
Query: 223 CPS-PDCSNAIKVAYVEAAPVTCRCGHTFCFACGENWHDPVRCCLLRKWIKKCDDDSETS 281
CPS P C NAI+V E V C CG FCF+C H P C + W KKC D+SET
Sbjct: 215 CPSTPHCGNAIRVEDDELCEVECSCGLQFCFSCSSQAHSPCSCVMWELWRKKCFDESETV 274
Query: 282 NWIAANTKECPKCNVTIEKDGGCNHMVCKNQNCKADFCWVCLGPWEPHGSSW-----YSC 336
NWI +TK CPKC+ +EK+GGCN + C C+ FCW+C G +W +SC
Sbjct: 275 NWITVHTKPCPKCHKPVEKNGGCNLVTCL---CRQSFCWLC-GEATGRDHTWARISGHSC 330
Query: 337 NRYDEDEAKAARDAQERSRAALQRYLFYCNRYMNHMQSLRFESKLYASVKEKMEEMQQHN 396
R+ ED+ K ER++ L+RY+ Y NRY H+ S + E+KL ++ +K+ ++
Sbjct: 331 GRFQEDKEK----QMERAKRDLKRYMHYHNRYKAHIDSSKLEAKLSNNISKKVSISEKRE 386
Query: 397 MSWIEVQFLKKAVDILCQCRQTLMYTYVFAYY-----LRKNNQSV--------IFEDNQR 443
+ + + + L + R+ L Y+Y FA+Y L K+ S +FED Q+
Sbjct: 387 LQLKDFSWATNGLHRLFRSRRVLSYSYPFAFYMFGDELFKDEMSSEEREIKQNLFEDQQQ 446
Query: 444 DLESATETLSEYLERDITSENLADIK-QKVQDKYRYCDSRRKVLLEHVHEGYEKD 497
LE+ E LS++LE + AD K +++ + L E+++E E D
Sbjct: 447 QLEANVEKLSKFLEEPF--DQFADDKVMQIRIQVINLSVAVDTLCENMYECIEND 499
>At4g34370.1 68417.m04883 IBR domain-containing protein similar to
SP|Q94981 Ariadne-1 protein (Ari-1) {Drosophila
melanogaster}; contains Pfam profile PF01485: IBR domain
Length = 597
Score = 269 bits (659), Expect = 3e-72
Identities = 150/432 (34%), Positives = 219/432 (50%), Gaps = 34/432 (7%)
Query: 46 EVLSTEEIVQHMVDCIKEVNTVVEIPATTTRILLNHFKWDKEKLMERFYDGDQDQLFSEA 105
+V++ E ++ + + V ++ I R LL H++WD EKL F + +D LFS A
Sbjct: 42 QVITQESLLAAQREDLLRVMELLSIKEHHARTLLIHYQWDVEKLFAVFVEKGKDSLFSGA 101
Query: 106 RVINPFRKPVIQRPKLPRRISTSGMEECEICFSVLPTSIMTGLECGHRFCTQCWCEYLTT 165
V V S C++C LP MT ++CGH FC CW E+ T
Sbjct: 102 GVT------VFDYQYGNSSFPQSSQMSCDVCMEDLPGDHMTRMDCGHCFCNNCWTEHFTV 155
Query: 166 KIMEEGLGQTIACAAHACDILVDDATVMRLVRDSRVKL--KYQHIITNSFVECNRLLRWC 223
+I EG + I C AH C+ + D+ V LV R L K+ + S++E NR+++WC
Sbjct: 156 QI-NEGQSKRIRCMAHQCNAICDEDIVRSLVSKKRPDLAAKFDRYLLESYIEDNRMVKWC 214
Query: 224 PS-PDCSNAIKVAYVEAAPVTCRCGHTFCFACGENWHDPVRCCLLRKWIKKCDDDSETSN 282
PS P C NAI+ + V C CG FCF+C H P C + W KKC D+SET N
Sbjct: 215 PSTPHCGNAIRAEDDKLCEVECSCGLQFCFSCLCQAHSPCSCLMWELWRKKCRDESETIN 274
Query: 283 WIAANTKECPKCNVTIEKDGGCNHMVCKNQNCKADFCWVCLG-PWEPH---GSSWYSCNR 338
WI +TK CPKC +EK+GGCN + C C FCW+C G H + +SC R
Sbjct: 275 WITVHTKLCPKCYKPVEKNGGCNLVRCICGQC---FCWLCGGATGSDHTYRSIAGHSCGR 331
Query: 339 YDEDEAKAARDAQERSRAALQRYLFYCNRYMNHMQSLRFESKLYASVKEKMEEMQQHNMS 398
Y +D+ K ER++ L RY Y +RY H S + E KL ++ EK+ + ++ +
Sbjct: 332 YQDDKEK----QMERAKRDLNRYTHYHHRYKAHTDSSKLEDKLRDTIHEKVSKSEKRELK 387
Query: 399 WIEVQFLKKAVDILCQCRQTLMYTYVFAYYL-------------RKNNQSVIFEDNQRDL 445
+ ++ +D L + R+ L Y+Y FAYY+ + + +FED Q+ L
Sbjct: 388 LKDFSWVTNGLDRLFRSRRVLSYSYAFAYYMFGEEMFKDEMTPEEREIKKNLFEDQQQQL 447
Query: 446 ESATETLSEYLE 457
ES E LS++LE
Sbjct: 448 ESNVEKLSQFLE 459
>At1g05890.1 68414.m00617 zinc finger protein-related contains low
similarity to zinc finger proteins and Pfam PF01485: IBR
domain
Length = 552
Score = 254 bits (622), Expect = 1e-67
Identities = 146/465 (31%), Positives = 227/465 (48%), Gaps = 26/465 (5%)
Query: 15 NESSGDDVDFAM-DVETHSTRERQTELEEYPYEVLSTEEIVQHMVDCIKEVNTVVEIPAT 73
+++ D+ DF + +T + + Y VL E+I +H D + V+ V+ I
Sbjct: 24 DDNDSDETDFGFGEADTDDAAIIASYRSKSNYVVLKEEDIRRHQNDDVGRVSAVLSITDV 83
Query: 74 TTRILLNHFKWDKEKLMERFYDGDQDQLFSEARVINPFRKPVIQRPKLPRRISTSGME-E 132
LL H+ W K+ + ++ D++++ R + PV+ P G E
Sbjct: 84 EASTLLLHYHWSVSKVNDEWF-ADEERV---RRTVGILEGPVVTTP--------DGREFT 131
Query: 133 CEICFSVLPTSIMTGLECGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHACDILVDDATV 192
C ICF + + CGH FC CW Y++T I + + C +C + +
Sbjct: 132 CGICFDSYTLEEIVSVSCGHPFCATCWTGYISTTINDGPGCLMLKCPDPSCPAAIGRDMI 191
Query: 193 MRLVRDSRVKLKYQHIITNSFVECNRLLRWCPSPDCSNAIKVAY-VEAAPVTCRCGHTFC 251
+L K KY S+VE NR ++WCP+P C +AI A E+ V+C C H+FC
Sbjct: 192 DKLA-SKEDKEKYYRYFLRSYVEVNREMKWCPAPGCEHAIDFAGGTESYDVSCLCSHSFC 250
Query: 252 FACGENWHDPVRCCLLRKWIKKCDDDSETSNWIAANTKECPKCNVTIEKDGGCNHMVCKN 311
+ C E H PV C + KWI K +SE NWI AN+K CPKC IEK+ GC HM C
Sbjct: 251 WNCTEEAHRPVDCDTVGKWILKNSAESENMNWILANSKPCPKCKRPIEKNHGCMHMTC-T 309
Query: 312 QNCKADFCWVCLGPWEPHG---SSWYSCNRYDEDEAKAARDAQERSRA----ALQRYLFY 364
CK +FCW+CL W HG +Y+CNRY+ + + D ER R +L+RY Y
Sbjct: 310 PPCKFEFCWLCLNAWTEHGERTGGFYACNRYEAAKQEGLYDEAERRREMAKNSLERYTHY 369
Query: 365 CNRY-MNHMQSLRFESKLYASVKEKMEEMQQHNMS-WIEVQFLKKAVDILCQCRQTLMYT 422
R+ N + + L EK+ ++ + +++F+ +A + +CR+ L +T
Sbjct: 370 YERWASNQVSRQKAMGDLQKMQSEKLGKLSDIQCTPESQLKFIAEAWLQIIECRRVLKWT 429
Query: 423 YVFAYYLRKNNQSVIFEDNQRDLESATETLSEYLERDITSENLAD 467
Y + YYL+ + + FE Q + ES E L + +E+DI LA+
Sbjct: 430 YAYGYYLQDHAKKPFFEYLQGEAESGLERLHKCVEKDIEVFELAE 474
>At3g27710.1 68416.m03460 zinc finger protein-related contains
similarity to zinc finger proteins and Pfam domain,
PF01485: IBR domain
Length = 537
Score = 250 bits (612), Expect = 2e-66
Identities = 150/435 (34%), Positives = 223/435 (51%), Gaps = 42/435 (9%)
Query: 46 EVLSTEEIVQHMVDCIKEVNTVVEIPATTTRILLNHFKWDKEKLMERFYDGDQDQLFSEA 105
+V+ E +V + + V ++ + R LL +++W+ EKL F D +D++FS A
Sbjct: 44 QVIKKESLVAAQKEILVRVMELLSVKENQARTLLIYYQWNVEKLFSVFADQGKDRMFSCA 103
Query: 106 RVINPFRKPVIQRPKLPRRISTSGMEECEICFSV-LPTSIMTGLECGHRFCTQCWCEYLT 164
+ F +P +++ +C++C LP+++MT +ECGHRFC CW + T
Sbjct: 104 G-LTVF---------VPSLVTSKKTMKCDVCMEDDLPSNVMTRMECGHRFCNDCWIGHFT 153
Query: 165 TKIMEEGLGQTIACAAHACDILVDDATVMRLVRDSRVKLKYQHIITNSFVECNRLLRWCP 224
KI EG + I C AH C + D+ V +LV +Y + S+VE N +++WCP
Sbjct: 154 VKI-NEGESKRILCMAHECKAICDEDVVRKLVSPELAD-RYDRFLIESYVEDNNMVKWCP 211
Query: 225 S-PDCSNAIKVAYV--EAAPVTCRCGHTFCFACGENWHDPVRCCLLRKWIKKCDDDSETS 281
S P C +AI+ + V C CG FCF+C H P C + + W KKC+D+SET
Sbjct: 212 SKPHCGSAIRKIEDGHDVVEVGCSCGLQFCFSCLSESHSPCSCLMWKLWKKKCEDESETV 271
Query: 282 NWIAANTKECPKCNVTIEKDGGCNHMVCKNQNCKADFCWVC---LGPWEPHGS-SWYSCN 337
NWI NTK CPKC+ I+K GCN M CK C FCW+C G + S + +SC
Sbjct: 272 NWITVNTKLCPKCSKPIQKRDGCNLMTCK---CGQHFCWLCGQATGRDHTYTSIAGHSCG 328
Query: 338 RYDEDEAKAARDAQERSRAALQRYLFYCNRYMNHMQSLRFESKLYASVKEKMEEMQQHNM 397
RY +++ + ER++ L RY Y RY H+ SL+ E KL S+ EK +
Sbjct: 329 RYKDEKVRQL----ERAQRDLDRYTHYHYRYKAHIDSLKLEDKLRKSILEKAVSNSETKD 384
Query: 398 SWI--EVQFLKKAVDILCQCRQTLMYTYVFAYY-----LRKNNQSV--------IFEDNQ 442
+ E ++ AV+ L R+ L +Y FA+Y L K+ S +FED Q
Sbjct: 385 QKVFKEYSWVTDAVNRLFISRRILSQSYPFAFYMFGEELFKDEMSEKEREIKKNLFEDQQ 444
Query: 443 RDLESATETLSEYLE 457
+ LE E LS+ LE
Sbjct: 445 QQLEGNVEKLSKILE 459
>At1g65430.1 68414.m07423 zinc finger protein-related contains weak
similarity to zinc finger proteins and a Pfam:PF01485
IBR domain
Length = 567
Score = 247 bits (604), Expect = 2e-65
Identities = 139/430 (32%), Positives = 217/430 (50%), Gaps = 29/430 (6%)
Query: 45 YEVLSTEEIVQHMVDCIKEVNTVVEIPATTTRILLNHFKWDKEKLMERFYDGDQDQLFSE 104
Y VLS +I + D I ++TV+ I ++ ILL H+ W ++ + ++ D++++
Sbjct: 51 YSVLSEADICKLQEDDISRISTVLSISRNSSAILLRHYNWCVSRVHDEWF-ADEEKVRDA 109
Query: 105 ARVINPFRKPVIQRPKLPRRISTSGMEECEICFSVLPTSIMTGLECGHRFCTQCWCEYLT 164
++ KPV+ P T G +C ICF + + CGH FC CW Y+T
Sbjct: 110 VGLLE---KPVVDFP-------TDGELDCGICFETFLSDKLHAAACGHPFCDSCWEGYIT 159
Query: 165 TKIMEEGLGQTIACAAHACDILVDDATVMRLVRDSRVKLKYQHIITNSFVECNRLLRWCP 224
T I + T+ C +C V + L D + K KY S+VE NR +WCP
Sbjct: 160 TAINDGPGCLTLRCPDPSCRAAVGQDMINLLAPD-KDKQKYTSYFVRSYVEDNRKTKWCP 218
Query: 225 SPDCSNAIKVAYVEAA-PVTCRCGHTFCFACGENWHDPVRCCLLRKWIKKCDDDSETSNW 283
+P C A+ V CRC ++FC+ C E H PV C + KW+ K +SE NW
Sbjct: 219 APGCDYAVNFVVGSGNYDVNCRCCYSFCWNCAEEAHRPVDCDTVSKWVLKNSAESENMNW 278
Query: 284 IAANTKECPKCNVTIEKDGGCNHMVCKNQNCKADFCWVCLGPWEPHG---SSWYSCNRYD 340
I AN+K CPKC IEK+ GC H+ C CK +FCW+CLG W HG +Y+CNRY+
Sbjct: 279 ILANSKPCPKCKRPIEKNQGCMHITC-TPPCKFEFCWLCLGAWTEHGEKTGGFYACNRYE 337
Query: 341 EDEAKAARDAQERSRA----ALQRYLFYCNRYMNHMQS----LRFESKLYASVKEKMEEM 392
+ D E+ R +L+RY Y R+ + S L K+ EK+ ++
Sbjct: 338 AAKQDGIYDETEKRREMAKNSLERYTHYYERWATNQSSRQKALLDLKKMQTDDIEKLSDI 397
Query: 393 QQHNMSWIEVQFLKKAVDILCQCRQTLMYTYVFAYYL--RKNNQSVIFEDNQRDLESATE 450
Q S +++F+ +A + +CR+ L +TY + +Y+ +++ + V FE Q + ES E
Sbjct: 398 QCQPES--QLKFIIEAWLQIVECRRVLKWTYAYGFYIPDQEHGKRVFFEYLQGEAESGLE 455
Query: 451 TLSEYLERDI 460
L + E+++
Sbjct: 456 RLHQCAEKEL 465
>At2g31510.1 68415.m03850 IBR domain-containing protein /
ARIADNE-like protein ARI7 (ARI7) identical to
ARIADNE-like protein ARI7 [Arabidopsis thaliana]
GI:29125028; contains similarity to Swiss-Prot:Q94981
ariadne-1 protein (Ari-1) [Drosophila melanogaster];
contains Pfam profile PF01485: IBR domain
Length = 562
Score = 245 bits (600), Expect = 5e-65
Identities = 140/443 (31%), Positives = 222/443 (50%), Gaps = 25/443 (5%)
Query: 47 VLSTEEIVQHMVDCIKEVNTVVEIPATTTRILLNHFKWDKEKLMERFYDGDQDQLFSEAR 106
VL E+I +H +D I+ V+ V+ I ILL HF W ++ + ++ D++++
Sbjct: 62 VLREEDIRRHQMDNIERVSVVLSITEVEASILLRHFHWSVGRVHDEWF-ADEERVRKTVG 120
Query: 107 VINPFRKPVIQRPKLPRRISTSGMEECEICFSVLPTSIMTGLECGHRFCTQCWCEYLTTK 166
++ P +L C ICF P + + CGH FCT CW Y++T
Sbjct: 121 ILESHVVPPSDDSELT----------CGICFDSYPPEKIASVSCGHPFCTTCWTGYISTT 170
Query: 167 IMEEGLGQTIACAAHACDILVDDATVMRLVRDSRVKLKYQHIITNSFVECNRLLRWCPSP 226
I + + C +C V V +L + K KY S++E NR ++WCP+P
Sbjct: 171 INDGPGCLMLRCPDPSCLAAVGHDMVDKLASEDE-KEKYNRYFLRSYIEDNRKMKWCPAP 229
Query: 227 DCSNAIK-VAYVEAAPVTCRCGHTFCFACGENWHDPVRCCLLRKWIKKCDDDSETSNWIA 285
C AI VA V+C C +FC+ C E H PV C + KWI K +SE NWI
Sbjct: 230 GCDFAIDFVAGSGNYDVSCLCSFSFCWNCTEEAHRPVDCSTVSKWILKNSAESENMNWIL 289
Query: 286 ANTKECPKCNVTIEKDGGCNHMVCKNQNCKADFCWVCLGPWEPHG---SSWYSCNRYDED 342
AN+K CP+C IEK+ GC HM C CK +FCW+CLG W HG +Y+CNRY+
Sbjct: 290 ANSKPCPRCKRPIEKNQGCMHMTC-TPPCKYEFCWLCLGAWMDHGERTGGFYACNRYEVA 348
Query: 343 EAKAARDAQERSRA----ALQRYLFYCNRYMNHMQS-LRFESKLYASVKEKMEEMQQHNM 397
+ + D ER R +L+RY Y R+ ++ S + + L + + +E++
Sbjct: 349 KQEGQYDETERRREMAKNSLERYTHYYERWASNQTSRQKAMADLQQAQMQNLEKLSDKQC 408
Query: 398 S-WIEVQFLKKAVDILCQCRQTLMYTYVFAYYLRKNNQS--VIFEDNQRDLESATETLSE 454
+ +++F+ +A + +CR+ L +TY + YYL ++ + FE Q + ES E L +
Sbjct: 409 TPESQLKFILEAWLQIIECRRVLKWTYAYGYYLPEHEHAKRQFFEYLQGEAESGLERLHQ 468
Query: 455 YLERDITSENLADIKQKVQDKYR 477
+E+D+ +A+ K + +R
Sbjct: 469 CVEKDLVQFLIAEGPSKDFNDFR 491
>At2g31760.1 68415.m03878 zinc finger protein-related contains low
similarity to zinc finger proteins and Pfam PF01485: IBR
domain
Length = 514
Score = 236 bits (578), Expect = 2e-62
Identities = 133/424 (31%), Positives = 214/424 (50%), Gaps = 23/424 (5%)
Query: 40 LEEYPYEVLSTEEIVQHMVDCIKEVNTVVEIPATTTRILLNHFKWDKEKLMERFYDGDQD 99
L E Y ++ EEI++ D I+ V+T++ + +LL H+ W KL + ++ D++
Sbjct: 38 LSEKSYVIIKEEEILKLQRDDIERVSTILFLSQVEAIVLLLHYHWCVSKLEDEWFT-DEE 96
Query: 100 QLFSEARVINPFRKPVIQRPKLPRRISTSGMEECEICFSVLPTSIMTGLECGHRFCTQCW 159
++ + + ++PV+ T +C ICF + + CGH +C CW
Sbjct: 97 RI---RKTVGILKEPVVDVN------GTEVDIQCGICFESYTRKEIASVSCGHPYCKTCW 147
Query: 160 CEYLTTKIMEEGLG-QTIACAAHACDILVDDATVMRLVRDSRVKLKYQHIITNSFVECNR 218
Y+TTKI E+G G + C +C +V + V + + K KY S+VE +
Sbjct: 148 TGYITTKI-EDGPGCLRVKCPEPSCYAVVGQDMIDE-VTEKKDKDKYYRYFLRSYVEDGK 205
Query: 219 LLRWCPSPDCSNAIKVAYVEAAPVTCRCGHTFCFACGENWHDPVRCCLLRKWIKKCDDDS 278
++WCPSP C A++ V C C + FC+ C E+ H PV C + KWI K D+S
Sbjct: 206 KMKWCPSPGCECAVEFGESSGYDVACLCSYRFCWNCSEDAHSPVDCETVSKWIFKNQDES 265
Query: 279 ETSNWIAANTKECPKCNVTIEKDGGCNHMVCKNQNCKADFCWVCLGPWEPHGSSWYSCNR 338
E NWI AN+K CPKC IEK GCNHM C + +C FCW+C + H Y+CN
Sbjct: 266 ENKNWILANSKPCPKCKRPIEKSHGCNHMTC-SASCGHRFCWICGKSYSDH----YACNN 320
Query: 339 YDEDEAKAARDAQERSRAALQRYLFYCNRYMNHMQS-LRFESKLYASVKEKMEEMQQHNM 397
Y ED A D + ++ ++RY Y R++ + S L+ S L +++++ +
Sbjct: 321 YVED---ADHDKRTLLQSEIKRYTHYYVRWVENQSSRLKAMSDLEKFQSVQLKQLSDNQC 377
Query: 398 S-WIEVQFLKKAVDILCQCRQTLMYTYVFAYYLRKNNQSVIFEDNQRDLESATETLSEYL 456
I++QF+ A + +CR+ L +TY + YYL + +FE Q + E+ E L
Sbjct: 378 KPKIDLQFIVDAWLQIIECRRVLKWTYAYGYYLDNLAKRPLFEYLQGEAETGLERLHHCA 437
Query: 457 ERDI 460
E ++
Sbjct: 438 ENEL 441
>At2g31770.1 68415.m03879 zinc finger (C3HC4-type RING finger)
family protein contains a Prosite:PS00518 Zinc finger,
C3HC4 type (RING finger), signature and Pfam domain,
PF01485: IBR domain
Length = 543
Score = 234 bits (572), Expect = 1e-61
Identities = 140/476 (29%), Positives = 241/476 (50%), Gaps = 32/476 (6%)
Query: 42 EYPYEVLSTEEIVQHMVDCIKEVNTVVEIPATTTRILLNHFKWDKEKLMERFYDGDQDQL 101
E Y +L E+I++ D I+ V++++ + +LL H+ W K+ + ++ D++++
Sbjct: 40 EKSYVILKEEDILKLQRDDIERVSSILSLSQVEVIVLLLHYNWCVSKVEDEWFT-DEERI 98
Query: 102 FSEARVINPFRKPVI-----QRPKLPRRISTSGMEECEICFSVLPTSIMTGLECGHRFCT 156
+ + ++PV+ ++ K R+++ +C ICF + + CGH +C
Sbjct: 99 ---RKAVGLLKEPVVDFNGGEKDKKCRKVNI----QCGICFESYTREEIARVSCGHPYCK 151
Query: 157 QCWCEYLTTKIMEEGLG-QTIACAAHACDILVDDATVMRLVRDSRVKLKYQHIITNSFVE 215
CW Y+TTKI E+G G + C +C V ++ V +++V KY I S+VE
Sbjct: 152 TCWAGYITTKI-EDGPGCLRVKCPEPSCSAAVGK-DMIEDVTETKVNEKYSRYILRSYVE 209
Query: 216 CNRLLRWCPSPDCSNAIKVAYVEAAP--VTCRCGHTFCFACGENWHDPVRCCLLRKWIKK 273
+ ++WCPSP C A++ E++ V+C C + FC+ C E+ H PV C + KWI K
Sbjct: 210 DGKKIKWCPSPGCGYAVEFGGSESSSYDVSCLCSYRFCWNCSEDAHSPVDCDTVSKWIFK 269
Query: 274 CDDDSETSNWIAANTKECPKCNVTIEKDGGCNHMVCKNQNCKADFCWVCLGPWEPHGSSW 333
D+SE NW+ AN+K CP+C IEK+ GCNHM C + C +FCW+CL + H
Sbjct: 270 NQDESENKNWMLANSKPCPECKRPIEKNDGCNHMTC-SAPCGHEFCWICLKAYRRHSG-- 326
Query: 334 YSCNRYDEDEAKAARDAQERSRAALQRYLFYCNRYMNHMQS-LRFESKLYASVKEKMEEM 392
+CNR+ ++A++ R + + ++RY Y R+ + S L+ L +++E+
Sbjct: 327 -ACNRFVVEQAESKRALLQ---SEIKRYTHYYVRWAENQSSRLKAMRDLEKLQSVQLKEL 382
Query: 393 QQHN-MSWIEVQFLKKAVDILCQCRQTLMYTYVFAYYLRKNNQSVIFEDNQRDLESATET 451
+ S ++QF A + +CR+ L +TY + YYL+ + FE Q + ES E
Sbjct: 383 SDNQCTSETQLQFTVDAWLQIIECRRVLKWTYAYGYYLQDLPKRKFFEYLQGEAESGLER 442
Query: 452 LSEYLERD-----ITSENLADIKQKVQDKYRYCDSRRKVLLEHVHEGYEKDCWDYT 502
L E + I SE+ +D + K + K E++ + E D T
Sbjct: 443 LHHCAENELKQFFIKSEDPSDTFNAFRMKLTGLTTVTKTYFENLVKALENGLVDVT 498
>At2g31780.1 68415.m03880 zinc finger (C3HC4-type RING finger)
family protein contains a Prosite:PS00518 Zinc finger,
C3HC4 type (RING finger), signature and Pfam:PF01485 IBR
domain
Length = 537
Score = 218 bits (532), Expect = 8e-57
Identities = 134/448 (29%), Positives = 228/448 (50%), Gaps = 33/448 (7%)
Query: 42 EYPYEVLSTEEIVQHMVDCIKEVNTVVEIPATTTRILLNHFKWDKEKLMERFYDGDQDQL 101
E Y V+ E+I++ D I++V+TV+ + + +LL H+ W KL + ++ D++++
Sbjct: 58 EKSYVVVKEEDILKLQRDDIEQVSTVLSVSQVESIVLLLHYHWCVSKLEDEWFT-DEERI 116
Query: 102 FSEARVINPFRKPVIQRPKLPRRISTSGMEECEICFSVLPTSIMTGLECGHRFCTQCWCE 161
+ + ++PV+ T +C ICF + + CGH +C CW
Sbjct: 117 ---RKTVGILKEPVVDVN------GTEVDIQCGICFESYTRKEIARVSCGHPYCKTCWTG 167
Query: 162 YLTTKIMEEGLG-QTIACAAHACDILVDDATVMRLVRDSRVKLKYQHIITNSFVECNRLL 220
Y+TTKI E+G G + C +C +V + V + + K KY S+VE + +
Sbjct: 168 YITTKI-EDGPGCLRVKCPEPSCYAVVGQDMIDE-VTEKKDKDKYYRYFLRSYVEDGKKM 225
Query: 221 RWCPSPDCSNAIK--VAYVEAAPVTCRCGHTFCFACGENWHDPVRCCLLRKWIKKCDDDS 278
+WCPSP C A++ V + V+C C + FC+ C E+ H PV C + KW+ K D+S
Sbjct: 226 KWCPSPGCEYAVEFGVNGSSSYDVSCLCSYKFCWNCCEDAHSPVDCETVSKWLLKNKDES 285
Query: 279 ETSNWIAANTKECPKCNVTIEKDGGCNHMVCKNQNCKADFCWVCLGPWEPH-GSSWYSCN 337
E NWI A TK CPKC IEK+ GCNHM C + C+ FCW CL P H + + +
Sbjct: 286 ENMNWILAKTKPCPKCKRPIEKNTGCNHMSC-SAPCRHYFCWACLQPLSDHKACNAFKAD 344
Query: 338 RYDEDEAKAARDAQERSRAALQRYLFYCNRYMNHMQSLRFESKLYASVKEKMEEMQQHNM 397
DE + K A+DA +R +R+ F + + M L K + +++ ++Q +
Sbjct: 345 NEDETKRKRAKDAIDRYTHFYERWAFNQSSRLKAMSDL---EKWQSVELKQLSDIQ--ST 399
Query: 398 SWIEVQFLKKAVDILCQCRQTLMYTYVFAYYL--RKNNQSV----IFEDNQRDLE----S 447
++ F A + +CR+ L +TY + YY+ ++ N+ V +F + + LE
Sbjct: 400 PETQLSFTVDAWLQIIECRRVLKWTYAYGYYILSQERNKRVFARSVFAEAENGLERLHHC 459
Query: 448 ATETLSEYLER-DITSENLADIKQKVQD 474
A E L +++ + + S+N +++ K+ D
Sbjct: 460 AEEELKQFIGKIEDPSKNFGELRAKLID 487
>At3g27720.1 68416.m03461 zinc finger protein-related contains
Pfam:PF01485 IBR domain
Length = 493
Score = 180 bits (439), Expect = 2e-45
Identities = 101/276 (36%), Positives = 146/276 (52%), Gaps = 29/276 (10%)
Query: 204 KYQHIITNSFVECNRLLRWCPS-PDCSNAIKVAYVEAA--PVTCRCGHTFCFACGENWHD 260
K+ + S+VE N +++WCPS P C NAI+ + V C CG FCF+C H
Sbjct: 151 KFDRFLIESYVEDNNMVKWCPSTPHCGNAIRNIKDDGDVDEVECSCGLQFCFSCLSESHS 210
Query: 261 PVRCCLLRKWIKKCDDDSETSNWIAANTKECPKCNVTIEKDGGCNHMVCKNQNCKADFCW 320
P C + + W KKC+D+SET NW+ NTK CPKC+ I+K GCNHM CK C FCW
Sbjct: 211 PCSCLMWKLWKKKCEDESETVNWMTVNTKLCPKCSKPIQKRDGCNHMTCK---CGQHFCW 267
Query: 321 VC---LGPWEPHGS-SWYSCNRYDEDEAKAARDAQERSRAALQRYLFYCNRYMNHMQSLR 376
+C G + S + +SC RY E++ + ER++ L RY Y RY H+ SL+
Sbjct: 268 LCGQATGRDHSYSSIAGHSCGRYKEEKVRQL----ERAQRDLDRYTHYHYRYKAHIDSLK 323
Query: 377 FESKLYASVKEK--MEEMQQHNMSWIEVQFLKKAVDILCQCRQTLMYTYVFAYYL----- 429
E KL S+ +K + + + E ++ AV+ L + R+ L Y+Y F +Y+
Sbjct: 324 LEDKLKKSILKKAVLNSETKDQKVFKEYSWIIDAVNRLFRSRRILSYSYPFVFYMFGKEL 383
Query: 430 --------RKNNQSVIFEDNQRDLESATETLSEYLE 457
+N + +FED Q+ LE E LS+ LE
Sbjct: 384 FKDDMSDEERNIKKNLFEDQQQQLEGNVERLSKILE 419
Score = 34.3 bits (75), Expect = 0.19
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 23 DFAMDVETHSTRERQTELEEYPYEVLSTEEI-VQHMVDCIKEVNTVVEIPATTTRILLNH 81
D M +E +E +++ + EE +QH + +V + + R LL
Sbjct: 3 DEYMSLEEEEDNCYPSEFDDHDQMCSNAEESDLQHSREPTSQVMEFLSVTENQARTLLIQ 62
Query: 82 FKWDKEKLMERFYDGDQDQLFSEA 105
++W+ +KL + D +D LFS A
Sbjct: 63 YQWNVDKLFSVYTDQGKDVLFSRA 86
>At5g08730.1 68418.m01037 IBR domain-containing protein contains
similarity to Swiss-Prot:Q94981 ariadne-1 protein
(Ari-1) [Drosophila melanogaster]
Length = 500
Score = 145 bits (351), Expect = 7e-35
Identities = 87/286 (30%), Positives = 142/286 (49%), Gaps = 20/286 (6%)
Query: 150 CGHRFCTQCWCEYLTTKIMEEGLGQ-TIACAAHACDILVDDATVMRLVRDSRVKLKYQHI 208
C H+F T CW EYL+ + + + I+C + C V T+ +L VK Y++
Sbjct: 96 CSHKFSTTCWSEYLSDALKKNKEQRGLISCLSQDCVASVGPDTIEQLTEP--VKEMYENY 153
Query: 209 ITNSFVECNRL-LRWCPSPDCSNAIKVAYV----EAAPVTCRCGHTFCFACGENWHDPVR 263
I SF+EC++ ++WCP+ C A+++ V C CGHTFC+ CG H PV
Sbjct: 154 ILESFMECHKATIKWCPASGCEYAVELQEDGNEDNVISVVCLCGHTFCWTCGLESHRPVS 213
Query: 264 CCLLRKWIKKCDDDSETSNWIAANTKECPKCNVTIEKDGGCNHMVCKNQNCKADFCWVCL 323
C W D S + +WI NTK CPKC + ++++G N+ + N C +FCW+CL
Sbjct: 214 CKKASIWWTYLLDQSRSISWIHTNTKSCPKCKIPVQQNGDPNYRLI-NCICSNNFCWICL 272
Query: 324 GPWEPHGSSWYSCNRYDEDEAKAARDAQERSRAALQRYLFYCNRYMNHMQSLRFESKLYA 383
E H +W +C + A A S + L H + +SKL A
Sbjct: 273 RTEEQHQGNW-NC-------SPVAVPAAGPSTVEFSQILHLNLWEAGHEALKKAKSKLRA 324
Query: 384 SVKEKM--EEMQQHNMSWIEVQFLKKAVDILCQCRQTLMYTYVFAY 427
++EK+ + ++ + ++++ +++A + QCRQ L ++ VF Y
Sbjct: 325 -LEEKIIPKLIENCGATELDIRTVREAGMLSVQCRQVLKWSCVFDY 369
>At5g63750.1 68418.m08001 IBR domain-containing protein contains a
Prosite:PS00518 Zinc finger, C3HC4 type (RING finger),
signature and Pfam:PF01485 IBR domain
Length = 536
Score = 112 bits (269), Expect = 6e-25
Identities = 122/480 (25%), Positives = 198/480 (41%), Gaps = 71/480 (14%)
Query: 42 EYPYEVLSTEEIVQHMVDCIKEVNTVVEIPATTTRILLNHFKWDKEKLMERFYDGDQDQL 101
E PY VL+ +++ +M I E++ + + +LL +WD ++ E F + +++
Sbjct: 6 EGPYSVLTRDQLKGNMKKQIAEISEIFSLSKPDATVLLMFLRWDSHEVSE-FLVENNEKV 64
Query: 102 FSEARVINPFRKPVIQRPKLPRRISTSGMEECEICFSVLPTS--IMTGLECGHRFCTQCW 159
SE+ + KPV+ P + C ICF +++ C H FC CW
Sbjct: 65 LSESGL-----KPVVVDPNQ----DLYKISSCGICFKTCDDGDYLISTPFCSHMFCKSCW 115
Query: 160 CEYLTTKIMEEGLGQT-IACAAHACDILVDDATVMRL-VRDSRVKLKYQHIITNSFVECN 217
+YL QT I+C AC V T+ +L V D + ++Y I S++E N
Sbjct: 116 RKYLEKNFYLVEKTQTRISCPHGACQAAVGPDTIQKLTVCDQEMYVEY---ILRSYIEGN 172
Query: 218 RLL--RWCPSPDCSNAIKVAYVE---------AAPVTCRCGHTFCFACGENWHDPVRCCL 266
++L ++CP+ DC+ I+ V C CGH FC+ C H PV C
Sbjct: 173 KVLEIKYCPAQDCNYVIEFHQKNHDGADQEDYGFNVVCLCGHIFCWRCMLESHKPVTCNN 232
Query: 267 LRKWI-KKCDDDSETS-------------------NWIAANTKECPKCNVTIEKDGGCNH 306
W+ + + S+ S + I A K CP C + G +
Sbjct: 233 ASDWLFRDLNSLSKESGEKPLSLSSFETREKTYPLSSIKATKKVCPHCLRPADL-GTKQY 291
Query: 307 MVCKNQNCKADFCWVCLGPWEPH--GSSWYS-CNRYDEDEAKAARDAQERSRAALQRYLF 363
+ C FCW C+ P E H S +Y CN E +A + + R+
Sbjct: 292 LRFLTCACNGRFCWKCMQPEEAHKTESGFYKFCNVSMTFEGRAPKTLEGRAEPE------ 345
Query: 364 YCNRYMNHMQSLRFESKLYASVKEKMEEMQQHNMSWI---EVQFLKKAVDILCQCRQTL- 419
N + ++ K S + EE N S + + ++K + ++ QCRQ L
Sbjct: 346 --NSCVGLWKASEVSLKQAKSDLQAFEESNIKNPSDLTEKDFTIIRKGLMLIVQCRQVLK 403
Query: 420 ---MYTYVFAYYLRKNNQSVIF--EDNQRDLESATETLSEYLER--DITSENLADIKQKV 472
+Y Y+ A Y + + F D +ES ++TL+E + R T EN +K KV
Sbjct: 404 WSCVYDYLHAEYEMSKREYLRFLQADATSLVESFSKTLNEEIGRASSATYENFCCVKHKV 463
>At5g63760.2 68418.m08003 IBR domain-containing protein contains
similarity to Swiss-Prot:Q94981 ariadne-1 protein
(Ari-1) [Drosophila melanogaster] and Pfam:PF01485 IBR
domain
Length = 452
Score = 103 bits (247), Expect = 3e-22
Identities = 79/295 (26%), Positives = 127/295 (43%), Gaps = 28/295 (9%)
Query: 150 CGHRFCTQCWCEYLTTKIMEEGLGQT-IACAAHACDILVDDATVMRL-VRDSRVKLKYQH 207
C H+FC CW +YL T I+C C V TV +L VRD + Y+
Sbjct: 54 CSHKFCKACWSKYLKKNFFSVEKNHTAISCPDRDCRAAVGPETVEKLTVRDQAM---YEL 110
Query: 208 IITNSFVE--CNRLLRWCPSPDCSNAIKVAYVE-----AAPVTCRCGHTFCFACGENWHD 260
I S+ E L+ CP+ C+ I+ + + C CGH FC+ C H
Sbjct: 111 YILKSYREKYLGWKLKLCPARGCNYVIEFHLASEDEEHSLNIVCLCGHIFCWRCMLESHR 170
Query: 261 PVRCCLLRKWIKKC-------DDDSETSNWIAANTKECPKCNVTIEKDGGCNHMVCKNQN 313
PV C W+ + D T +WI ANTK CP C + +E DG
Sbjct: 171 PVTCNNASDWLSRDLEKLIEEVDKPSTVSWIDANTKPCPHCFIPVEIDGERPWAQFLTCV 230
Query: 314 CKADFCWVCLGPWEPHGSSWYSCNRYDEDEAKAARDAQERSRAALQRYLFYCNRYMNHMQ 373
C FCW C E HG+S SC + + R++ + L N ++
Sbjct: 231 CSGRFCWKCFRSPETHGTSG-SC-LAPARSSNVGFNHWNRAKPGIS-CLDLWNASQVNLV 287
Query: 374 SLRFESKLY-ASVKEKMEEMQQHNMSWIEVQFLKKAVDILCQCRQTLMYTYVFAY 427
+ ++E + + S+ +K ++++ +V+ L++ + ++ QCRQ L ++ + Y
Sbjct: 288 NAKYELEAFEESIIKKPSDLKEQ-----DVKVLREGLMLIVQCRQFLKWSCAYDY 337
>At5g63760.1 68418.m08002 IBR domain-containing protein contains
similarity to Swiss-Prot:Q94981 ariadne-1 protein
(Ari-1) [Drosophila melanogaster] and Pfam:PF01485 IBR
domain
Length = 452
Score = 103 bits (247), Expect = 3e-22
Identities = 79/295 (26%), Positives = 127/295 (43%), Gaps = 28/295 (9%)
Query: 150 CGHRFCTQCWCEYLTTKIMEEGLGQT-IACAAHACDILVDDATVMRL-VRDSRVKLKYQH 207
C H+FC CW +YL T I+C C V TV +L VRD + Y+
Sbjct: 54 CSHKFCKACWSKYLKKNFFSVEKNHTAISCPDRDCRAAVGPETVEKLTVRDQAM---YEL 110
Query: 208 IITNSFVE--CNRLLRWCPSPDCSNAIKVAYVE-----AAPVTCRCGHTFCFACGENWHD 260
I S+ E L+ CP+ C+ I+ + + C CGH FC+ C H
Sbjct: 111 YILKSYREKYLGWKLKLCPARGCNYVIEFHLASEDEEHSLNIVCLCGHIFCWRCMLESHR 170
Query: 261 PVRCCLLRKWIKKC-------DDDSETSNWIAANTKECPKCNVTIEKDGGCNHMVCKNQN 313
PV C W+ + D T +WI ANTK CP C + +E DG
Sbjct: 171 PVTCNNASDWLSRDLEKLIEEVDKPSTVSWIDANTKPCPHCFIPVEIDGERPWAQFLTCV 230
Query: 314 CKADFCWVCLGPWEPHGSSWYSCNRYDEDEAKAARDAQERSRAALQRYLFYCNRYMNHMQ 373
C FCW C E HG+S SC + + R++ + L N ++
Sbjct: 231 CSGRFCWKCFRSPETHGTSG-SC-LAPARSSNVGFNHWNRAKPGIS-CLDLWNASQVNLV 287
Query: 374 SLRFESKLY-ASVKEKMEEMQQHNMSWIEVQFLKKAVDILCQCRQTLMYTYVFAY 427
+ ++E + + S+ +K ++++ +V+ L++ + ++ QCRQ L ++ + Y
Sbjct: 288 NAKYELEAFEESIIKKPSDLKEQ-----DVKVLREGLMLIVQCRQFLKWSCAYDY 337
>At5g63730.1 68418.m07999 IBR domain-containing protein contains
similarity to Swiss-Prot:Q94981 ariadne-1 protein
(Ari-1) [Drosophila melanogaster] and Pfam:PF01485 IBR
domain
Length = 506
Score = 95.5 bits (227), Expect = 7e-20
Identities = 82/301 (27%), Positives = 131/301 (43%), Gaps = 29/301 (9%)
Query: 44 PYEVLSTEEIVQHMVDCIKEVNTVVEIPATTTRILLNHFKWDKEKLMERFYDGDQDQLFS 103
PY VL+ EI M I E++ + I + +LL + +WD ++ ER + ++++L
Sbjct: 8 PYSVLTRNEITVKMKKQINEISDIFFISNSDATVLLMYLRWDSLRVSERLGE-NKEKLLM 66
Query: 104 EARVINPFRKPVIQRPKLPRRISTSGMEECEICFSVLPTSIMTGLECGHRFCTQCWCEYL 163
++ + K V+ P P S +E F +++ C H+F ++ W EYL
Sbjct: 67 DSGL-----KSVMIDPS-PDSSSEISLETDVYEFDG-DNDLISMPFCSHKFDSKYWREYL 119
Query: 164 TTKI-MEEGLGQTIACAAHACDILVDDATVMRL-VRDSRVKLKYQHIITNSFVECNRLL- 220
E + TI+C C V T+ +L VRD + Y+ I S++E N++L
Sbjct: 120 EKNFYYVEKIQTTISCPDQDCRSAVGPDTIEKLTVRDQEM---YERYIWRSYIEGNKVLM 176
Query: 221 -RWCPSPDCSNAIKVAYVE------AAPVTCRCGHTFCFACGENWHDPVRCCLLRKWI-- 271
+ CP+ +C I+ + V C CGH FC+ C H PV C W+
Sbjct: 177 IKQCPARNCDYVIEFHQENDDDDEYSLNVVCICGHIFCWRCRLESHRPVSCNKASDWLCS 236
Query: 272 --KKCDDDSETSNWIAANTKECPKCNVTIEKDGGC-NHMVCKNQNCKADFCWVCLGPWEP 328
K D+S + T CP C ++E D + C C+ FC CL E
Sbjct: 237 ATMKISDESFSLYPTKTKTVTCPHCLCSLESDTKMPQFLTCV---CRLRFCSRCLRSEEA 293
Query: 329 H 329
H
Sbjct: 294 H 294
>At5g10370.1 68418.m01203 helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
similar to RNA-dependent ATPase/helicase Cdc28p
[Schizosaccharomyces pombe] GI:1439562; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain, weak hit
to PF00097: Zinc finger, C3HC4 type (RING finger),
PF01485: IBR domain
Length = 1775
Score = 88.6 bits (210), Expect = 8e-18
Identities = 58/197 (29%), Positives = 84/197 (42%), Gaps = 13/197 (6%)
Query: 132 ECEICFSVLPTSIMTGLE-CGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHACDILVDDA 190
EC IC S + LE C H FC C E M I C+ C + A
Sbjct: 1563 ECPICLSEVDDGY--SLEGCSHLFCKACLLEQFEAS-MRNFDAFPILCSHIDCGAPIVLA 1619
Query: 191 TVMRLVRDSRVKLKYQHIITNSFVECNRLLRWCPSPDCSNAIKVAYVEAA--PVTCRCGH 248
+ L+ ++ + +++ + R+C +PDC + +VA + + P C H
Sbjct: 1620 DMRALLSQEKLDELFSASLSSFVTSSDGKFRFCSTPDCPSVYRVAGPQESGEPFICGACH 1679
Query: 249 T-FCFACGENWHDPVRCCLLRKWIKKCDDDSETSNWIAA-NTKECPKCNVTIEKDGGCNH 306
+ C C +H + C +K+ K + D +W N KECP C TIEK GCNH
Sbjct: 1680 SEICTRCHLEYHPLITCERYKKF--KENPDLSLKDWAKGKNVKECPICKSTIEKTDGCNH 1737
Query: 307 MVCKNQNCKADFCWVCL 323
M C+ C CW CL
Sbjct: 1738 MKCR---CGKHICWTCL 1751
>At5g60250.1 68418.m07552 zinc finger (C3HC4-type RING finger)
family protein contains a Prosite:PS00518 Zinc finger,
C3HC4 type (RING finger), signature and Pfam domain
PF01485: IBR domain
Length = 655
Score = 85.0 bits (201), Expect = 1e-16
Identities = 72/258 (27%), Positives = 108/258 (41%), Gaps = 29/258 (11%)
Query: 122 PRRISTSGMEECEICFSVLPTSIMTGLE-CGHRFCTQCWCEYLTTKIMEEGLGQTIACAA 180
PR+ EEC ICF+ + M ++ C HRFC QC +++ K++ G C
Sbjct: 290 PRQAKAVLKEECAICFNDIVAEGMFSVDKCRHRFCFQCVKQHVEVKLLH---GMAPKCPH 346
Query: 181 HACDI-LVDDATVMRLVRDSRVKLKYQHIITNSFVECNRLLRWCPSPDCS---NAIKVA- 235
C LV DA +L+ KL Q + N+ R+ +CP P CS + K++
Sbjct: 347 DGCKSELVIDACG-KLLTPKLSKLWQQRLQENAIPVTERV--YCPYPRCSALMSKTKISE 403
Query: 236 --------YVEAAPVTC-RCGHTFCFACGENWHDPVRCCLLRKWIKKCDDDSETSNWIAA 286
Y ++ C C FC C WH + C +K + D +A
Sbjct: 404 SAKSLLSLYPKSGVRRCVECRGLFCVDCKVPWHGNLSCTEYKKLHPEPPADDVKLKSLAN 463
Query: 287 NT--KECPKCNVTIEKDGGCNHMVCKNQNCKADFCWVCLGPWEP-HGSSWYSCNRYDEDE 343
N ++C KC IE GCNH+ C+ C +FC+ C G W G+ C ++E+
Sbjct: 464 NKMWRQCGKCQHMIELSQGCNHITCR---CGHEFCYNCGGGWNKIMGTCLNRCPTWNEE- 519
Query: 344 AKAARDAQERSRAALQRY 361
R R+ A Y
Sbjct: 520 -YITRQDPARANVAANNY 536
>At4g01020.1 68417.m00137 helicase domain-containing protein / IBR
domain-containing protein / zinc finger protein-related
similar to SP|Q14562 ATP-dependent helicase DDX8 (RNA
helicase HRH1) (DEAH-box protein 8) {Homo sapiens};
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger),
PF01485: IBR domain
Length = 1787
Score = 83.4 bits (197), Expect = 3e-16
Identities = 57/197 (28%), Positives = 83/197 (42%), Gaps = 13/197 (6%)
Query: 132 ECEICFSVLPTSIMTGLE-CGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHACDILVDDA 190
EC IC S + LE C H FC C E M I C+ C + A
Sbjct: 1560 ECPICLSEVDDGY--SLEGCSHLFCKACLLEQFEAS-MRNFDAFPILCSHIDCGAPIVVA 1616
Query: 191 TVMRLVRDSRVKLKYQHIITNSFVECNRLLRWCPSPDCSNAIKVAYVEAA--PVTCRCGH 248
+ L+ ++ ++ + LR+C +PDC + +VA + + P C H
Sbjct: 1617 DMRALLSQEKLDELISASLSAFVTSSDGKLRFCSTPDCPSIYRVAGPQESGEPFICGACH 1676
Query: 249 T-FCFACGENWHDPVRCCLLRKWIKKCDDDSETSNWIAA-NTKECPKCNVTIEKDGGCNH 306
+ C C +H + C +K+ K + D +W + KECP C TIEK GCNH
Sbjct: 1677 SETCTRCHLEYHPLITCERYKKF--KENPDLSLKDWAKGKDVKECPICKSTIEKTDGCNH 1734
Query: 307 MVCKNQNCKADFCWVCL 323
+ C+ C CW CL
Sbjct: 1735 LQCR---CGKHICWTCL 1748
>At2g26135.1 68415.m03136 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF01485:IBR domain
Length = 384
Score = 82.2 bits (194), Expect = 7e-16
Identities = 49/198 (24%), Positives = 94/198 (47%), Gaps = 16/198 (8%)
Query: 133 CEICFSV-LPTSIMTGLE-CGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHACDILVDDA 190
C ICF + +M ++ CGH FC++C ++ +++ G I C ++ C +
Sbjct: 153 CTICFDDDINADMMFYIDQCGHMFCSECVKRHIEVSLLQ---GSLITCPSYRCKSKLTYG 209
Query: 191 TVMRLVRDSRVKLKYQHIITNSFVECNRLLRWCPSPDCSNAIKVAYVE---AAPVTC-RC 246
+ + ++ ++ Q + +S +R+ +CP+P CS + V ++ + C +C
Sbjct: 210 SCVNILTPKVKEMWIQRMGEDSIPVTDRV--YCPNPTCSALMSVTELDQLTGSKRCCVKC 267
Query: 247 GHTFCFACGENWHDPVRCCLLRKWIKKCDDDSETSNWIA--ANTKECPKCNVTIEKDGGC 304
G +FC C WHD + C +K + + N +A + ++C KC IE GC
Sbjct: 268 GESFCIKCKVPWHDNLSCKRYKKLHSNRTTNDKQLNELANQESWRQCSKCKHMIELTQGC 327
Query: 305 NHMVCKNQNCKADFCWVC 322
++C+ C +FC+ C
Sbjct: 328 VRVICR---CGHEFCYGC 342
Score = 34.3 bits (75), Expect = 0.19
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 222 WCPSPDCSNAIKVAYVEAAPVTCRCGHTFCFACG 255
W C + I++ V CRCGH FC+ CG
Sbjct: 311 WRQCSKCKHMIELTQ-GCVRVICRCGHEFCYGCG 343
>At3g53690.1 68416.m05929 zinc finger (C3HC4-type RING finger)
family protein contains a Zinc finger, C3HC4 type (RING
finger) signature, PROSITE:PS00518 and a IBR domain,
Pfam:PF01485
Length = 320
Score = 79.4 bits (187), Expect = 5e-15
Identities = 61/234 (26%), Positives = 94/234 (40%), Gaps = 18/234 (7%)
Query: 114 PVIQRPKLPRRISTSGMEECEICF---SVLPTSIMTGLECGHRFCTQCWCEYLTTKIMEE 170
P I R K S + +CEIC S++ + + G C H +C C +Y+ K+ +
Sbjct: 96 PPIHREKGQSSSSKTATFDCEICVDSKSIIESFRIGG--CSHFYCNDCVSKYIAAKLQDN 153
Query: 171 GLGQTIACAAHACDILVDDATVMRLVRDSRVKLKYQHIITNSFVECNRLLRWCPSPDCSN 230
L +I C C ++ R + V ++ + + V ++ +CP DCS
Sbjct: 154 IL--SIECPVSGCSGRLEPDQC-RQILPKEVFDRWGDALCEAVVMRSKKF-YCPYKDCSA 209
Query: 231 AIKVAYVEAAPVTCRCGHTF---CFACGENWHDPVRCCLLRKWI--KKCDDDSETSNWIA 285
+ + E C H C CG WH + C +K ++ DD +
Sbjct: 210 LVFLEESEVKMKDSECPHCHRMVCVECGTQWHPEMTCEEFQKLAANERGRDDILLATMAK 269
Query: 286 ANT-KECPKCNVTIEKDGGCNHMVCKNQNCKADFCWVCLGPWEPHGSSWYSCNR 338
K CP C IEK GC +M C+ C FC+ C P H Y+C R
Sbjct: 270 QKKWKRCPSCKFYIEKSQGCLYMKCR---CGLAFCYNCGTPSRDHTHYCYNCKR 320
>At4g19670.1 68417.m02889 zinc finger (C3HC4-type RING finger)
family protein contains a Prosite:PS00518 Zinc finger,
C3HC4 type (RING finger), signature and Pfam domain
PF01485: IBR domain
Length = 532
Score = 71.7 bits (168), Expect = 1e-12
Identities = 60/247 (24%), Positives = 101/247 (40%), Gaps = 21/247 (8%)
Query: 130 MEECEICFSVLPTSIMTGLECGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHACDILVDD 189
+E C IC + +M L+C H+FC+ C Y+ K+ + I C C +
Sbjct: 204 IENCSICCEDRQSEMMLSLKCTHKFCSHCMKTYVEGKVKTSEV--PIRCPQVQCKHYLSA 261
Query: 190 A--------TVMRLVRDSRVKLKYQHIITNSFVECNRLL--RWC-PSPDCSNAIKVAYVE 238
A T + ++ V K I + C+ LL + C S S++
Sbjct: 262 AECKSFLPVTTFKSFEEANVCSKNNGKIYCPYPNCSFLLDPQECLSSGRASSSSSTQSEN 321
Query: 239 AAPVTCR-CGHTFCFACGENWHDPVRCCLLRKW-IKKCDDDSETSNWIA--ANTKECPKC 294
+ V C C C CG WH + C + + + D T + +A + C +C
Sbjct: 322 SCCVECPVCERFVCVDCGVPWHASMSCEEFQILPVDERYPDDITLHRLARYKRWRRCQQC 381
Query: 295 NVTIEKDGGCNHMVCKNQNCKADFCWVCLGPWEPHGSSWYSCNRYDEDEAKAARDAQERS 354
+ IE GCNHM C+ C +FC+ C G G +C +D+DE + +E +
Sbjct: 382 RIMIELAQGCNHMTCR---CGHEFCYSC-GAEYREGQQTCTCAFWDDDEEEQENAVEENT 437
Query: 355 RAALQRY 361
++++
Sbjct: 438 IQEVEQW 444
>At3g45580.1 68416.m04923 zinc finger (C3HC4-type RING finger)
family protein contains a Prosite:PS00518 Zinc finger,
C3HC4 type (RING finger), signature
Length = 408
Score = 70.5 bits (165), Expect = 2e-12
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 19/205 (9%)
Query: 133 CEICF--SVLPTSIMTGLECGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHACDILVDDA 190
C IC + P + + CGH FC +C ++ +++ G+ + C + C+ + A
Sbjct: 173 CSICSDDNFEPELMFSVALCGHEFCVECVKRHIEVRLLAGGVPR---CLHYQCESKLTLA 229
Query: 191 TVMRLVRDSRVKLKYQHIITNSFVECNRLLRWCPSPDCSNAIKVAYVEAAP---VTCR-- 245
L+ S++K ++ I + + +CP+P CS+ + V + + VT R
Sbjct: 230 NCANLLT-SKLKAMWELRIEEESIPVEERV-YCPNPRCSSLMSVTKLSNSTREDVTMRSC 287
Query: 246 --CGHTFCFACGENWHDPVRCCLLRKWIKKCDDDSETSNWIAANT--KECPKCNVTIEKD 301
CG FC C WH + C + D +A ++C C IE
Sbjct: 288 VKCGEPFCINCKLPWHSNLSCNDYKSLGPNPTADDIKLKALANQKMWRQCENCKNVIELS 347
Query: 302 GGCNHMVCKNQNCKADFCWVCLGPW 326
GC H+ C+ C FC+ C W
Sbjct: 348 EGCMHITCR---CGHQFCYKCGAKW 369
Score = 31.1 bits (67), Expect = 1.8
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 114 PVIQRPKLPRRISTSGMEECEICFSVLPTS---IMTGLECGHRFCTQCWCEYLTTKI 167
P KL + +CE C +V+ S + CGH+FC +C +++T ++
Sbjct: 318 PTADDIKLKALANQKMWRQCENCKNVIELSEGCMHITCRCGHQFCYKCGAKWITGRV 374
>At1g32340.1 68414.m03985 zinc finger (C3HC4-type RING finger)
family protein contains a Zinc finger, C3HC4 type (RING
finger) signature, PROSITE:PS00518
Length = 688
Score = 70.5 bits (165), Expect = 2e-12
Identities = 60/213 (28%), Positives = 86/213 (40%), Gaps = 27/213 (12%)
Query: 130 MEECEICFSVLPTSIMTGLECGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHACDILVDD 189
+ EC ICFS L C H FC +C Y T + EG + C C V
Sbjct: 375 LHECCICFSESAGIDFVKLPCQHFFCLKCMKTY-TDIHVTEGTVNKLKCPDSKCGETVPP 433
Query: 190 ATVMRLVRDSRVKLKYQHIITNSFVECNRLLRWCPSPDCSNAIKVAYVEAAPVTCRCGHT 249
+ RL+ D + +++ ++ +E + +CP C + E + +C +
Sbjct: 434 GILKRLLGDEAYE-RWETLMLQKTLESMTDVAYCPR--CETPC-IEDEEQLALCFKCYFS 489
Query: 250 FCFACGENWHDPVRCCL--LRKWIKKCDDDS------------ETSNWIAA------NTK 289
FC C E H V C LR I + DS E N I + + K
Sbjct: 490 FCTLCKEKRHVGVACMSPELRLQILQERQDSSRLGEEQRRKEKEMINEIMSVKVIMKSAK 549
Query: 290 ECPKCNVTIEKDGGCNHMVCKNQNCKADFCWVC 322
+CP C + I + GGCN MVC NC FC+ C
Sbjct: 550 QCPSCKIAISRTGGCNKMVC--NNCGQYFCYRC 580
Score = 31.9 bits (69), Expect = 1.0
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 291 CPKCNVTIEKDGGCNHMVCKNQNCKADFCWVC 322
CP C K G NH+ C C+A FC++C
Sbjct: 637 CPNCRQFNGKAGNNNHLFC--WACQAHFCYLC 666
>At3g45470.1 68416.m04910 zinc finger protein-related contains low
similarity to Swiss-Prot:O76924 ariadne-2 protein
(Ari-2) [Drosophila melanogaster]
Length = 222
Score = 68.9 bits (161), Expect = 7e-12
Identities = 48/205 (23%), Positives = 85/205 (41%), Gaps = 16/205 (7%)
Query: 131 EECEICFSVLPTSIMTGLE-CGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHACDILVDD 189
E C IC M ++ C HR C C + + K+ G C + C + +
Sbjct: 4 ETCVICLEETKADRMFVMDKCLHRHCYPCVNQLVEVKLRN---GTVPTCLDYECKLKLSL 60
Query: 190 ATVMRLVRDSRVKLKYQHIITNSFVECNRLLRWCPSPDCSNAIKVAYVEAAPVT----C- 244
++++ ++L ++H++ + + + +CP +CS + + + + C
Sbjct: 61 ENCFKVLKPKVIEL-WKHMMKEESIPLAKRI-YCPYINCSTLMSKTEISRSNKSNDRACI 118
Query: 245 RCGHTFCFACGENWHDPVRCCLLRKWIKKCDDDSETSNWIAANTK--ECPKCNVTIEKDG 302
+C C C WH + C +K D T +A + K +C KC IE +
Sbjct: 119 KCSGLVCIDCKVPWHSDLSCAEYKKLHPDPVLDDLTLKLLANDQKWRQCVKCRHLIELNQ 178
Query: 303 GCNHMVCKNQNCKADFCWVCLGPWE 327
GCNHM C+ C FC+ C W+
Sbjct: 179 GCNHMTCR---CGYQFCYKCGVEWK 200
>At3g43750.1 68416.m04674 zinc finger (C3HC4-type RING finger)
family protein contains a zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 346
Score = 68.9 bits (161), Expect = 7e-12
Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 19/191 (9%)
Query: 133 CEICFS-VLPTSIMTGLE-CGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHACDILVDDA 190
C ICF+ VL M + CGH+FC +C Y+ K++E G+ + C + C+ +
Sbjct: 155 CSICFNNVLEAEKMFSVAICGHQFCVECVKHYIEVKLLEGGVPR---CLDYQCESKLTLT 211
Query: 191 TVMRLVRDSRVKLKYQHIITNSFVECNRLLRWCPSPDCSNAIKVAYV------EAAPVTC 244
+ L+ + Q I + R+ +CP+P CS + + + + TC
Sbjct: 212 SCGNLLTPKLKAIWKQRIEEELILVAERV--YCPNPRCSGLMSKTELSTSTEEDVSTRTC 269
Query: 245 --RCGHTFCFACGENWHDPVRCCLLRKWIKKCDDDSETSNWIAANTK---ECPKCNVTIE 299
+CG FC C WH + C ++ + ++ + AN + +C KC I
Sbjct: 270 CVKCGEPFCINCKVPWHSNLSCDDYKR-LGPNPTKNDIKLKVLANQQKWSQCAKCQHMIA 328
Query: 300 KDGGCNHMVCK 310
+ GCN ++C+
Sbjct: 329 RIEGCNVIICR 339
>At3g45555.1 68416.m04920 zinc finger (C3HC4-type RING finger)
family protein low similarity to UbcM4-interacting
protein 4 [Mus musculus] GI:13991706; contains Pfam
profiles PF00097: Zinc finger C3HC4 type (RING finger),
PF01485: IBR (In Between Ring fingers) domain
Length = 213
Score = 68.5 bits (160), Expect = 1e-11
Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 15/189 (7%)
Query: 131 EECEICFS--VLPTSIMTGLECGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHACDILVD 188
E C ICF+ + C H+FC +C Y+ +++E G + C + C+ +
Sbjct: 15 ETCSICFNDDFKSEQMYYVALCNHKFCLECMKRYIEVRLLE---GTVLICPYYQCESKLT 71
Query: 189 DATVMRLVRDSRVKLKYQHIITNSFVECNRLLRWCPSPDCSN-----AIKVAYVEAAPVT 243
+ ++ S++K ++ I + +CP+P CS + + +E V
Sbjct: 72 LKSCFHIL-TSKLKAMWEQKIEEESIPVTERF-YCPNPRCSALMSKIELSKSTLEDGFVR 129
Query: 244 C-RCGHTFCFACGENWHDPVRCCLLRKWIKKCDDDSETSNWIAANTK--ECPKCNVTIEK 300
C +CG FC C +W + C +K D + +A K +C KC I+
Sbjct: 130 CFQCGERFCINCKVSWQSNLSCDNCKKLGNNPTSDDKMLKVLANEKKWRQCEKCQHMIKL 189
Query: 301 DGGCNHMVC 309
GC H+ C
Sbjct: 190 SEGCIHVTC 198
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 114 PVIQRPKLPRRISTSGMEECEICFSVLPTSIMTGLECGHRFCTQC 158
PV +R P ++ M + E+ S L + +CG RFC C
Sbjct: 97 PVTERFYCPNPRCSALMSKIELSKSTLEDGFVRCFQCGERFCINC 141
>At2g26130.1 68415.m03135 zinc finger (C3HC4-type RING finger)
family protein contains a zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 398
Score = 66.9 bits (156), Expect = 3e-11
Identities = 46/201 (22%), Positives = 83/201 (41%), Gaps = 17/201 (8%)
Query: 131 EECEICFS--VLPTSIMTGLECGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHACDILVD 188
E C IC + + + + + GH C++C ++ +++E G I C + C+ L+
Sbjct: 157 ETCNICLNDDINADQMFSVDKSGHMCCSECVKRHIEVRLLE---GSLITCPHYRCNSLLT 213
Query: 189 DATVMRLVRDSRVKLKYQHIITNSFVECNRLLRWCPSPDCSNAIKVAYVEAAPVTCR--- 245
L+ K+ Q +R+ +CP+P CS + + + R
Sbjct: 214 SVRCGNLLTPKLNKMWEQKTKDELIPVMDRV--YCPNPRCSTLMSETELSGLNIGVRRCC 271
Query: 246 --CGHTFCFACGENWHDPVRCCLLRKWIKKCDDDSETSNWIA--ANTKECPKCNVTIEKD 301
CG FC C +WH+ + C + ++ +A + ++C KC IE
Sbjct: 272 VKCGEPFCVKCKVSWHNNLSCDEYKTLHPNPTENDGRLRDLANEKSWRQCSKCKHMIELS 331
Query: 302 GGCNHMVCKNQNCKADFCWVC 322
GC +VC+ C FC+ C
Sbjct: 332 SGCISVVCR---CGHTFCYQC 349
Score = 37.1 bits (82), Expect = 0.027
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 222 WCPSPDCSNAIKVAYVEAAPVTCRCGHTFCFACGENWHD 260
W C + I+++ V CRCGHTFC+ CG + D
Sbjct: 318 WRQCSKCKHMIELSS-GCISVVCRCGHTFCYQCGADAGD 355
>At3g45540.1 68416.m04918 zinc finger (C3HC4-type RING finger)
family protein contains a Prosite:PS00518 Zinc finger,
C3HC4 type (RING finger), signature
Length = 348
Score = 66.5 bits (155), Expect = 4e-11
Identities = 48/213 (22%), Positives = 88/213 (41%), Gaps = 21/213 (9%)
Query: 122 PRRISTSGMEECEICFS--VLPTSIMTGLECGHRFCTQCWCEYLTTKIMEEGLGQTIACA 179
PR+ + C+IC + + +C HRFC+ C ++ +++E G + C
Sbjct: 89 PRQPKATRKTTCKICLDDDINENQMFCVGKCRHRFCSDCMRRHIEVRLLE---GSVMRCP 145
Query: 180 AHACDILVDDATVMRLVRDSRVKLKYQHIITNSFVECNRLLRWCPSPDCS-----NAIKV 234
+ C + + L+ +++ +Q I + + +CP+ CS + +
Sbjct: 146 HYRCKTTLKFGGCINLLTP-KIREMWQQRIKEDLIPVTGRI-YCPNSRCSALMSETELSI 203
Query: 235 AYVEAAPVTC--RCGHTFCFACGENWHDPVRCCLLRKWIKKCDDDSETSNWIAANTK--- 289
+ E C +CG FC C +WH + C +K + +++ AN K
Sbjct: 204 STKEDEVRRCCFKCGQIFCIKCKVSWHSNLSCNDYKK-LNPYPTENDGKIKALANQKRWR 262
Query: 290 ECPKCNVTIEKDGGCNHMVCKNQNCKADFCWVC 322
+C KC IE GC + C+ C FC+ C
Sbjct: 263 QCGKCQHMIELSKGCVQVKCR---CGHKFCYRC 292
Score = 35.9 bits (79), Expect = 0.063
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 221 RWCPSPDCSNAIKVAYVEAAPVTCRCGHTFCFACG 255
RW C + I+++ V CRCGH FC+ CG
Sbjct: 260 RWRQCGKCQHMIELSK-GCVQVKCRCGHKFCYRCG 293
>At3g14250.1 68416.m01804 zinc finger protein-related contains weak
similarity to zinc finger proteins and Pfam:PF01485 IBR
domain
Length = 308
Score = 64.1 bits (149), Expect = 2e-10
Identities = 53/183 (28%), Positives = 75/183 (40%), Gaps = 16/183 (8%)
Query: 133 CEICFSVLPTS-IMTGL-ECGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHACDILVDDA 190
C IC P+S I G C H +CT C Y+ TKI E I C C L++
Sbjct: 95 CMICMDEKPSSDIFRGTTNCTHAYCTDCTVRYVATKIKEN--ASRIKCPDVECTRLIEPY 152
Query: 191 TVMRLVRDSRVKLKYQHIITNSFVECNRLLRWCPSPDCSNAIKVAYVEAAPVT---CR-C 246
T L+ V +++ I+ S + +CP DCS + A VT CR C
Sbjct: 153 TCRDLI-PKDVFDRWEKILCESLISSWDKF-YCPFKDCSAMMVNNENGDANVTQTECRSC 210
Query: 247 GHTFCFACGENWHDPVRCCLLRKW----IKKCDDDSETSNWIAANT--KECPKCNVTIEK 300
FC C WH + C +++ K D+D +A N + CP C ++K
Sbjct: 211 HRLFCVQCKVTWHAGIGCDEFQRFGNTKKKSSDEDDALLIQMAKNKQWRRCPSCKFYVDK 270
Query: 301 DGG 303
G
Sbjct: 271 VEG 273
>At2g19610.2 68415.m02291 zinc finger (C3HC4-type RING finger)
family protein contains a zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 418
Score = 62.9 bits (146), Expect = 5e-10
Identities = 52/212 (24%), Positives = 85/212 (40%), Gaps = 26/212 (12%)
Query: 131 EECEICFS-VLPTSIMTGLECGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHAC--DILV 187
E C +C++ V P C HR C C + +++ + G T C C D++
Sbjct: 201 ESCPVCYAYVSPNDKFEVQGCFHRICVTCMRKPFSSEQILRG--NTAICPYPDCENDLVP 258
Query: 188 DDATVMRLVRDS-RVKLKYQHIITNSFVECNRLLRWCPSPDCSNAIK----VAYV----- 237
+D R D+ + L Q + +R+ +CP+P CS + + ++
Sbjct: 259 EDC---RAFADADAITLMIQRKKEKAIPVKDRV--YCPNPSCSFLMSDLDLIRHISKNPR 313
Query: 238 --EAAPVTCRCGHTFCFACGENWHDPVRCCLLRKWIKKCDDDSETSNWIAANT--KECPK 293
E A CG +FC C WH C +K D+ K+C +
Sbjct: 314 HSEEARKCMECGLSFCKKCHVPWHYKKTCDEFKKSESYLKSDAAILESFVKTQGWKKCSQ 373
Query: 294 CNVTIEKDGGCNHMVCKNQNCKADFCWVCLGP 325
C ++ GGC M C+ +CK +FC+ C P
Sbjct: 374 CQSIVQHGGGCQQMTCR--HCKHEFCYTCGAP 403
>At2g25360.1 68415.m03035 zinc finger protein-related contains weak
similarity to zinc finger proteins and Pfam PF01485: IBR
domain
Length = 373
Score = 62.5 bits (145), Expect = 6e-10
Identities = 50/207 (24%), Positives = 81/207 (39%), Gaps = 18/207 (8%)
Query: 131 EECEICFSVLPTSIM--TGLECGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHACDILVD 188
E C ICF M T +C HR C C +Y+ K++ G C C +
Sbjct: 88 EICSICFEETEGERMFFTTEKCVHRHCFPCVKQYVEVKLLS---GTVPTCLDDGCKFKLT 144
Query: 189 DATVMRLVRDSRVKLKYQHIITNSFVECNRLLRWCPSPDCSNAIKVAYVEAAPV-----T 243
+ +++ +++ Q + +S R+ +CP P+CS + + + +
Sbjct: 145 LESCSKVLTLELIEMWKQKMKEDSIPAAERI--YCPYPNCSMLMSKTELSSESDLSNDRS 202
Query: 244 C-RCGHTFCFACGENWHDPVRCCLLRKWIKKCDDDSETSNWIAANTK--ECPKCNVTIEK 300
C +C FC C H + C +K D +A + K +C C IE
Sbjct: 203 CVKCCGLFCIDCKVPSHSDLSCAEYKKLHHDPLVDELKLKSLAKDKKWRQCKMCRHMIEL 262
Query: 301 DGGCNHMVCKNQNCKADFCWVCLGPWE 327
CNHM C+ C FC+ C W+
Sbjct: 263 SHACNHMTCR---CGYQFCYQCEVEWK 286
Score = 37.1 bits (82), Expect = 0.027
Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 221 RWCPSPDCSNAIKVAYVEAAPVTCRCGHTFCFACGENWHDPVRCC 265
+W C + I++++ +TCRCG+ FC+ C W + + C
Sbjct: 249 KWRQCKMCRHMIELSHA-CNHMTCRCGYQFCYQCEVEWKNDQKTC 292
>At2g25370.1 68415.m03037 zinc finger protein-related contains weak
similarity to zinc fingers and Pfam:PF01485 IBR domain
Length = 603
Score = 55.2 bits (127), Expect = 1e-07
Identities = 54/208 (25%), Positives = 83/208 (39%), Gaps = 21/208 (10%)
Query: 131 EECEICFSVLPTSIMTGLE-CGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHACDILVDD 189
E C I F M E C HR C C +++ K+ G C + C +
Sbjct: 302 ETCGIFFEETDVEHMFVTEKCLHRHCFPCVKQHVKVKLRS---GTEPTCLEYGCKFKLTL 358
Query: 190 ATVMRLVRDSRVKLKYQHIITNSFVECNRLLRWCPSPDCSNAI-KVAYVEAAPV----TC 244
+++ +++ Q + +S R+ +CP P+CS + K A + TC
Sbjct: 359 ERCSKVLTLKLIEMWKQKMKEDSIPAAERI--YCPYPNCSMLMSKTELSSEADLSNVRTC 416
Query: 245 -RCGHTFCFACGENWHDPVRCCLLRKWIKK-CDDDSETSNWIAANTK---ECPKCNVTIE 299
+C FC C H + +K DD + + AN K +C KC IE
Sbjct: 417 VKCCGLFCIDCKVPSHTDLSYDDYKKLHPDPLVDDLKLKS--LANDKMWRQCVKCRHMIE 474
Query: 300 KDGGCNHMVCKNQNCKADFCWVCLGPWE 327
GCNHM C+ C +FC+ C W+
Sbjct: 475 LSHGCNHMTCR---CGYEFCYECGIEWQ 499
Score = 36.7 bits (81), Expect = 0.036
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 222 WCPSPDCSNAIKVAYVEAAPVTCRCGHTFCFACGENWHDPVRCCLLRK 269
W C + I++++ +TCRCG+ FC+ CG W + ++ K
Sbjct: 463 WRQCVKCRHMIELSH-GCNHMTCRCGYEFCYECGIEWQKRDKVIMMMK 509
>At3g45570.1 68416.m04922 zinc finger (C3HC4-type RING finger)
family protein contains a zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 312
Score = 54.4 bits (125), Expect = 2e-07
Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 16/142 (11%)
Query: 133 CEICF--SVLPTSIMTGLECGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHACDILVDDA 190
C IC ++ P I + CGH FC +C +++ K++ G+ + C + C+ +
Sbjct: 163 CSICSGDNIEPEQIFSVALCGHEFCMECVKQHIEVKLLSGGVPR---CLHYQCESNLTLG 219
Query: 191 TVMRLVRDSRVKLKYQ-HIITNSFVECNRLLRWCPSPDCSNAIKVAYV------EAAPVT 243
+ ++ S++K ++ I S R+ +CP+P CS+ + V + + T
Sbjct: 220 SCGNIL-TSKLKAMWELRIEEESIPVAERV--YCPNPLCSSLMSVTKLSNSTREDVTMRT 276
Query: 244 C-RCGHTFCFACGENWHDPVRC 264
C +CG FC C WH + C
Sbjct: 277 CVKCGEPFCINCKLPWHSNLSC 298
>At3g45510.1 68416.m04914 zinc finger (C3HC4-type RING finger)
family protein contains a zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 257
Score = 52.4 bits (120), Expect = 7e-07
Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 13/146 (8%)
Query: 127 TSGMEECEICF--SVLPTSIMTGLECGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHACD 184
T+ + C ICF + + + C H FC +C + + + E G+ + C H C
Sbjct: 60 TTQKKTCGICFVDDIEGQEMFSAALCSHYFCVECMKQRIEVSLNEGGVPR---CPRHGCK 116
Query: 185 ILVDDATVMRLVRDSRVKLKYQHIITNSFVECNRLLRWCPSPDCSNAI-KVAYVEAAPVT 243
+ + L+ + ++ Q I S CNR CP+P C + K E+
Sbjct: 117 SALTLRSCDHLLTPKQREMWEQRIKEESIPVCNRF--HCPNPKCWALMSKTELTESTDDG 174
Query: 244 CR-----CGHTFCFACGENWHDPVRC 264
R C FC C +WH + C
Sbjct: 175 VRRCCSKCRKPFCIDCNVSWHSNLSC 200
>At2g21420.1 68415.m02549 zinc finger protein-related contains low
similarity to zinc finger proteins and Pfam PF01485: IBR
domain
Length = 468
Score = 52.4 bits (120), Expect = 7e-07
Identities = 52/229 (22%), Positives = 91/229 (39%), Gaps = 20/229 (8%)
Query: 125 ISTSGMEECEICFSVLPTSIMTGLE-CGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHAC 183
I G E C IC M E C HR C C ++ ++ G + C C
Sbjct: 179 IEAIGGETCCICRENTDADRMFFTENCFHRQCFSCVNRHVQRMLL---CGISPTCLHFPC 235
Query: 184 DILVDDATVMRLVRDSRVKLKYQHIITNSFVECNRLLRWCPSPDCS-----NAIKVAYVE 238
+ + + +++ + ++ + I + +++ +CP CS A+ +
Sbjct: 236 NSELTFESCSKVLTPNLIEFWKRKIEEDLVPAADKI--YCPYRRCSMLMSKTALSRETDQ 293
Query: 239 AAPVTC-RCGHTFCFACGENWHDPVRCCLLRKWIKKCDDDSETSNWIAANTK---ECPKC 294
+ C +C FC C H + C +K D + + AN K +C +C
Sbjct: 294 SNVRACIKCCRLFCIDCKVPSHAGLSCVDYKKLNPDPLYDVKLKS--LANKKKWRQCVQC 351
Query: 295 NVTIEKDGGCNHMVCKNQNCKADFCWVCLGPWEPHGSSWYSCNRYDEDE 343
+ +E GCNH+ C+ C +FC+VC W G C+ D+D+
Sbjct: 352 SNLVELFEGCNHITCR---CGFEFCYVCGKEWNQRGCLSPGCDDDDDDD 397
>At2g19610.1 68415.m02290 zinc finger (C3HC4-type RING finger)
family protein contains a zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 397
Score = 50.4 bits (115), Expect = 3e-06
Identities = 46/197 (23%), Positives = 76/197 (38%), Gaps = 24/197 (12%)
Query: 131 EECEICFS-VLPTSIMTGLECGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHAC--DILV 187
E C +C++ V P C HR C C + +++ + G T C C D++
Sbjct: 201 ESCPVCYAYVSPNDKFEVQGCFHRICVTCMRKPFSSEQILRG--NTAICPYPDCENDLVP 258
Query: 188 DDATVMRLVRDS-RVKLKYQHIITNSFVECNRLLRWCPSPDCSNAIK----VAYV----- 237
+D R D+ + L Q + +R+ +CP+P CS + + ++
Sbjct: 259 EDC---RAFADADAITLMIQRKKEKAIPVKDRV--YCPNPSCSFLMSDLDLIRHISKNPR 313
Query: 238 --EAAPVTCRCGHTFCFACGENWHDPVRCCLLRKWIKKCDDDSETSNWIAANT--KECPK 293
E A CG +FC C WH C +K D+ K+C +
Sbjct: 314 HSEEARKCMECGLSFCKKCHVPWHYKKTCDEFKKSESYLKSDAAILESFVKTQGWKKCSQ 373
Query: 294 CNVTIEKDGGCNHMVCK 310
C ++ GGC M C+
Sbjct: 374 CQSIVQHGGGCQQMTCR 390
>At3g45480.1 68416.m04911 zinc finger (C3HC4-type RING finger)
family protein contains a zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 373
Score = 47.2 bits (107), Expect = 3e-05
Identities = 46/207 (22%), Positives = 78/207 (37%), Gaps = 26/207 (12%)
Query: 133 CEICFS--VLPTSIMTGLECGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHACDILVDDA 190
C CF+ + ++ + C H FC +C E++ + E GL + C C +
Sbjct: 156 CGNCFNDGIKGENMFSADLCSHYFCVECMKEHIEVSLNEGGLPR---CPHDGCTSNLTLR 212
Query: 191 TVMRLVRDSRVKLKYQHIITNSFVECNRLLRWCPSPDC-----SNAIKVAYVEAAPVTC- 244
+ L+ + ++ + I S C+R CP+P C + + E C
Sbjct: 213 SCDHLLTPKQREMWEKRIKEESIPVCDRF--HCPNPRCWALMSKTELTESTEEDGVRRCC 270
Query: 245 -RCGHTFCFACGENWHDPVRCCLLRKWIKKCDDDSETSNWIAANTKECPKCNVTIEKDGG 303
+C FC C WH + C K K + T+ W ++C C I+
Sbjct: 271 YKCRKHFCINCKVPWHSNLSC----KEHKSSGREPITTVW-----RQCRSCLHKIKLSEE 321
Query: 304 CNHMVCKNQNCKADFCWVCLGPWEPHG 330
+ C+ C FC+ C W+ G
Sbjct: 322 RMPVTCR---CGYKFCYACGAQWKLGG 345
>At2g25380.1 68415.m03039 zinc finger protein-related very low
similarity to SP|O95376 Ariadne-2 protein homolog
(ARI-2) (Triad1 protein) {Homo sapiens}; contains Pfam
profile PF01485: IBR (In Between Ring fingers) domain
Length = 350
Score = 44.8 bits (101), Expect = 1e-04
Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 7/111 (6%)
Query: 243 TC-RCGHTFCFACGENWHDPVRCCLLRKWIKKCDDDSETSNWIAANT--KECPKCNVTIE 299
TC +C FC C H + C +K + D +A ++C C IE
Sbjct: 230 TCVKCNGLFCIDCKVPSHSDLSCADYKKLHPELLVDDIKLKLLANENMWRQCVMCRHLIE 289
Query: 300 KDGGCNHMVCKNQNCKADFCWVCLGPWEPHGSSWYS-CNRYDEDEAKAARD 349
GCNHM C+ C FC+ C W+ + + S C +A + D
Sbjct: 290 LSDGCNHMTCR---CGYQFCYGCGIEWKKNQDTCPSGCREMGHGDADSDDD 337
Score = 36.3 bits (80), Expect = 0.047
Identities = 35/132 (26%), Positives = 50/132 (37%), Gaps = 20/132 (15%)
Query: 131 EECEICFSVLPTSIMTGLE-CGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHACDILVDD 189
E C IC M + C HR+C C + T + GL D+ D
Sbjct: 198 ETCVICLEETVADRMFFTDKCLHRYCFSCVKQ---TCVKCNGLFCIDCKVPSHSDLSCAD 254
Query: 190 ATVMR---LVRDSRVKLKYQHIITNSFVECNRLLRWCPSPDCSNAIKVAYVEAAPVTCRC 246
+ LV D ++KL + V C L+ S C++ +TCRC
Sbjct: 255 YKKLHPELLVDDIKLKLLANENMWRQCVMCRHLIEL--SDGCNH-----------MTCRC 301
Query: 247 GHTFCFACGENW 258
G+ FC+ CG W
Sbjct: 302 GYQFCYGCGIEW 313
>At5g37560.1 68418.m04523 zinc finger protein-related contains weak
similarity to zinc fingers and Pfam:PF01485 IBR domain
Length = 408
Score = 41.9 bits (94), Expect = 0.001
Identities = 39/190 (20%), Positives = 73/190 (38%), Gaps = 16/190 (8%)
Query: 133 CEICFSVLPTS-IMTGLECGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHACDILVDDAT 191
C IC ++ +C HR C C + + K+ G C C + +
Sbjct: 165 CSICSDKTDAEHMLLNDKCLHRHCFSCVKQQVKVKLRS---GIVPPCLEDGCKSELTLES 221
Query: 192 VMRLVRDSRVKLKYQHIITNSFVECNRLLRWCPSPDCSNAIKVAYV----EAAPV-TC-R 245
++ +++ + + + + ++ +CP CS + + E + V C +
Sbjct: 222 CSMVLTPKLIEMWKRKMEEDLIPDAEKI--YCPYRSCSMLMSKTELSREAEQSNVRACIK 279
Query: 246 CGHTFCFACGENWHDPVRCCLLRKWIKKCDDDSETSNWIAANT---KECPKCNVTIEKDG 302
C FC C WH + C ++ I ++ + AN ++C +C IE
Sbjct: 280 CSELFCIDCKVPWHSDLSCADYKR-IHSERLVNDMMLKVLANDQMWRQCSECKHMIELTE 338
Query: 303 GCNHMVCKNQ 312
GCNH+ C Q
Sbjct: 339 GCNHITCSCQ 348
>At1g05880.1 68414.m00616 expressed protein
Length = 426
Score = 41.9 bits (94), Expect = 0.001
Identities = 28/112 (25%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Query: 388 KMEEMQQHNMSWIEVQFLKKAVDILCQCRQTLMYTYVFAYYLRKN--NQSVIFEDNQRDL 445
++ Q N+S +++F+ +A + +CR+ L +TYV+ YYLR++ + + +D Q L
Sbjct: 296 ELSNTQLENVS--QLKFILEAGLQIIECRRVLEWTYVYGYYLREDEVGKQNLLKDTQERL 353
Query: 446 ESATETLSEYLERDITSENLADIKQKVQDKYRYCDSRRKVLLEHVHEGYEKD 497
+ E L LE ++ + K + +R + L + +E KD
Sbjct: 354 KKFVENLKHCLETNLQPFRYEEEPSKDFNAFRIKLTELTSLTRNHYENVVKD 405
Score = 40.3 bits (90), Expect = 0.003
Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 14/127 (11%)
Query: 45 YEVLSTEEIVQHMVDC-IKEVNTVVEIPATTTRILLNHFKWDKEKLMERFYDGDQDQLFS 103
Y + TEE ++ +++ ++ V+ + +LL+H +W+ + + +++ G Q S
Sbjct: 18 YATVLTEEDIRALMEIDVQSVSDFTSLSKAEATLLLSHLRWNVDCICKQWSAGAQSVRDS 77
Query: 104 EARVINPFRKPVIQRPKLPRRISTSGMEECEICFSVLPTSIMTGLECGHRFCTQCWCEYL 163
+ + P S C C P + + CGHR CT+CW ++
Sbjct: 78 VGLL-------ELDPP------SDDNEYFCGACGESHPHKNLASVSCGHRICTRCWTSHI 124
Query: 164 TTKIMEE 170
I E+
Sbjct: 125 NKIISEK 131
>At5g63740.1 68418.m08000 zinc finger protein-related
Length = 226
Score = 39.5 bits (88), Expect = 0.005
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 150 CGHRFCTQCWCEYLTTKI--MEEGLGQTIACAAHACDILVDDATVMRL-VRDSRVKLKY 205
C H+FC CW EYL T +EE L I+C C V T+ +L V D + L Y
Sbjct: 150 CTHKFCKTCWREYLETNFYSLEENL-TVISCPDQDCGASVRLKTIEKLGVHDQDMYLSY 207
>At3g45560.1 68416.m04921 zinc finger (C3HC4-type RING finger)
family protein contains Zinc finger, C3HC4 type (RING
finger) signature, PROSITE:PS00518
Length = 503
Score = 37.1 bits (82), Expect = 0.027
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 125 ISTSGMEECEICFSV-LPTSIMTGLE-CGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHA 182
++ S + C ICF+ M ++ CGH+FC +C +Y+ +++EE + C +
Sbjct: 147 MAPSQRKTCGICFNDDFKAEHMFSVDLCGHQFCVECMTQYIKVRLLEE---SEMRCPHYQ 203
Query: 183 CD 184
C+
Sbjct: 204 CE 205
>At5g07640.1 68418.m00875 zinc finger (C3HC4-type RING finger)
family protein contains a zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518 and a IBR domain,
Pfam:PF01485
Length = 316
Score = 35.9 bits (79), Expect = 0.063
Identities = 33/147 (22%), Positives = 56/147 (38%), Gaps = 14/147 (9%)
Query: 130 MEECEICFSVLPTSIMTGLE-CGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHACDILV- 187
ME C +C+ + + + C HRFC C + + E + C + C+ +
Sbjct: 154 METCPVCYEHVTSDEKFEVPGCFHRFCFDCIKKQADVAL--EFAKPVVNCPSFGCNSELQ 211
Query: 188 --DDATVMRLVRDSRVKLKYQHIITNS----FVECNRLLRWCPSPDCSNAIKVAYVEAAP 241
D V++ + R+ + + + + FV C PD K +V+A
Sbjct: 212 REDCEGVLKPKQLDRMTMYKKASMIKAKVLDFVCCTTCDNVMAKPDLIEYTKTFFVDAEL 271
Query: 242 VTCR----CGHTFCFACGENWHDPVRC 264
R CG+ FC C WH + C
Sbjct: 272 SGVRKCTECGYCFCGECRAGWHSGMTC 298
>At1g11100.1 68414.m01271 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to RUSH-1alpha [Oryctolagus cuniculus]
GI:1655930; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain
Length = 1226
Score = 35.9 bits (79), Expect = 0.063
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 133 CEICFSVLPTSIMTGLECGHRFCTQCWCEYLT 164
C IC +V P + L CGH FC QC CE LT
Sbjct: 919 CGIC-NVAPKDAVVSL-CGHVFCNQCICECLT 948
>At5g22750.1 68418.m02657 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to SP|P36607 DNA
repair protein rad8 {Schizosaccharomyces pombe};
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 1029
Score = 33.9 bits (74), Expect = 0.25
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
Query: 85 DKEKLMERFYDGDQDQLFSEARVINPFRKPVIQRPKLPRRISTSGMEECEICFSVLPTSI 144
D KL +RF G L E + + + +Q R G EC IC L ++
Sbjct: 750 DLNKLSKRFLSGKSSGLEREGKDVPS--EAFVQEVVEELRKGEQG--ECPICLEALEDAV 805
Query: 145 MTGLECGHRFCTQC 158
+T C HR C +C
Sbjct: 806 LT--PCAHRLCREC 817
>At2g44900.1 68415.m05589 armadillo/beta-catenin repeat family
protein / F-box family protein contains similarity to
F-box protein FBL2 GI:6010699 from [Rattus norvegicus];
contains Pfam profiles PF00514:
Armadillo/beta-catenin-like repeat, PF00646: F-box
domain
Length = 930
Score = 33.9 bits (74), Expect = 0.25
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 266 LLRKWIKKCDDDSETSNWIAANTKECPKCNVTIEKDGGCNHMVCKNQNCK 315
L+ +W CD E + AN KC++ + K GG + +V +NCK
Sbjct: 528 LIFRWPNGCDGVLERAAGALANLAADDKCSMEVAKAGGVHALVMLARNCK 577
>At2g40770.1 68415.m05030 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger (C3HC4 type RING
finger) family protein low similarity to SP|P36607 DNA
repair protein rad8 {Schizosaccharomyces pombe}; contains
Pfam profiles PF00271: Helicase conserved C-terminal
domain, PF00176: SNF2 family N-terminal domain, PF00628:
PHD-finger, PF00097: Zinc finger, C3HC4 type (RING
finger)
Length = 1648
Score = 33.9 bits (74), Expect = 0.25
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 131 EECEICFSVLPTSIMTGLECGHRFCTQCWCEYLTTKIMEEGLGQTIAC 178
E C IC +L M +CGH C C+ K ++E L + + C
Sbjct: 1326 EACPICHEILRNQKMV-FQCGHSTCCNCFFAMTERKSVQETLQKWVMC 1372
>At5g47430.1 68418.m05844 expressed protein
Length = 879
Score = 33.1 bits (72), Expect = 0.44
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 10/90 (11%)
Query: 111 FRKPVIQRPKLPRRISTSGME-ECEICFSVLPTSIMTGLECGHRFCTQCWCEYLTTKIME 169
F K + P R + E +C +C V+ + +T C FC +C +++ +K M
Sbjct: 272 FEKEMEGLPSTTRSVGELPPELKCPLCKEVMKDAALTSKCCYKSFCDKCIRDHIISKSM- 330
Query: 170 EGLGQTIACAAHACDILVDDATVMRLVRDS 199
C D+L DD + +RD+
Sbjct: 331 --------CVCGRSDVLADDLLPNKTLRDT 352
>At4g08590.1 68417.m01412 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profiles PF00097: Zinc
finger C3HC4 type (RING finger), PF02182: YDG/SRA
domain
Length = 465
Score = 33.1 bits (72), Expect = 0.44
Identities = 11/20 (55%), Positives = 12/20 (60%)
Query: 241 PVTCRCGHTFCFACGENWHD 260
PVT CGH FC C + W D
Sbjct: 119 PVTILCGHNFCLKCFDKWID 138
>At1g66050.1 68414.m07497 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 623
Score = 33.1 bits (72), Expect = 0.44
Identities = 11/18 (61%), Positives = 11/18 (61%)
Query: 241 PVTCRCGHTFCFACGENW 258
PVT CGH FC C E W
Sbjct: 139 PVTTPCGHNFCLKCFEKW 156
>At1g66040.1 68414.m07495 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 622
Score = 33.1 bits (72), Expect = 0.44
Identities = 11/18 (61%), Positives = 11/18 (61%)
Query: 241 PVTCRCGHTFCFACGENW 258
PVT CGH FC C E W
Sbjct: 139 PVTTPCGHNFCLKCFEKW 156
>At1g18660.4 68414.m02326 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 491
Score = 33.1 bits (72), Expect = 0.44
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 206 QHIITNSFVECNRLLRWCPSPDCSNAIKVAYVEAAPVTCRCGHTFCFAC 254
+ ++ NS + + + DC+ +K+ Y P T CGHTFC +C
Sbjct: 174 EKVMPNSMRKTHGMAERSDDFDCTVCLKLLY---EPATTPCGHTFCRSC 219
>At1g18660.3 68414.m02329 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 486
Score = 33.1 bits (72), Expect = 0.44
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 206 QHIITNSFVECNRLLRWCPSPDCSNAIKVAYVEAAPVTCRCGHTFCFAC 254
+ ++ NS + + + DC+ +K+ Y P T CGHTFC +C
Sbjct: 174 EKVMPNSMRKTHGMAERSDDFDCTVCLKLLY---EPATTPCGHTFCRSC 219
>At1g18660.2 68414.m02328 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 486
Score = 33.1 bits (72), Expect = 0.44
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 206 QHIITNSFVECNRLLRWCPSPDCSNAIKVAYVEAAPVTCRCGHTFCFAC 254
+ ++ NS + + + DC+ +K+ Y P T CGHTFC +C
Sbjct: 174 EKVMPNSMRKTHGMAERSDDFDCTVCLKLLY---EPATTPCGHTFCRSC 219
>At1g18660.1 68414.m02327 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 486
Score = 33.1 bits (72), Expect = 0.44
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 206 QHIITNSFVECNRLLRWCPSPDCSNAIKVAYVEAAPVTCRCGHTFCFAC 254
+ ++ NS + + + DC+ +K+ Y P T CGHTFC +C
Sbjct: 174 EKVMPNSMRKTHGMAERSDDFDCTVCLKLLY---EPATTPCGHTFCRSC 219
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 33.1 bits (72), Expect = 0.44
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 13/95 (13%)
Query: 223 CPSPDCSNAIKVAYVEAAPVTCRCGHTFC---FACGENWHDPVRCCLLRKWIKKCDDDSE 279
C S C +++ + + +TC CG T +CG PV C L I + S+
Sbjct: 620 CHSGHCPPCLEMIFTD---LTCACGRTSIPPPLSCGT----PVPSCQLPCPIPQPCGHSD 672
Query: 280 TSNWIAANTKECPKCNVTIEKDGGCNHMVCKNQNC 314
T + +CP C+ +EK H+V +N C
Sbjct: 673 THG---CHFGDCPPCSTPVEKKCVGGHVVLRNIPC 704
>At5g44280.1 68418.m05420 zinc finger (C3HC4-type RING finger)
family protein contains similarity to polycomb-M33
interacting protein Ring1B [Mus musculus] GI:2239142;
contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 486
Score = 32.7 bits (71), Expect = 0.58
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Query: 132 ECEICFSVLPTSIMTGLECGHRFCTQCWCEYLTTKIMEEGLGQTIACAAH 181
+C IC ++ + T +EC HRFC +C K M G + AC H
Sbjct: 135 QCPICLGIIKKT-RTVMECLHRFCREC-----IDKSMRLGNNECPACRKH 178
>At5g39550.1 68418.m04791 zinc finger (C3HC4-type RING finger)
family protein contains zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 617
Score = 32.7 bits (71), Expect = 0.58
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 241 PVTCRCGHTFCFACGENW 258
P+T CGH FC C E W
Sbjct: 139 PITTPCGHNFCLKCFEKW 156
>At5g01960.1 68418.m00115 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 426
Score = 32.7 bits (71), Expect = 0.58
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 241 PVTCRCGHTFCFACGENWHDPVRCC-LLRKWIKKCD 275
P+ RC H FC C W + R C L R +K D
Sbjct: 375 PILLRCKHMFCEDCVSEWFERERTCPLCRALVKPAD 410
>At4g35030.1 68417.m04969 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 321
Score = 32.3 bits (70), Expect = 0.77
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 367 RYMNHMQSLRFESKLYASVKEKMEEMQQHNMSWIEVQFLKKAVDILCQ 414
R+ NH Q+L +E+ L +K++++++ + N W L+KA Q
Sbjct: 62 RFPNHQQTLNYETSL---IKKQIKDILRDNNKWFNYNVLRKATSDFSQ 106
>At4g27470.1 68417.m03947 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 243
Score = 32.3 bits (70), Expect = 0.77
Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 6/85 (7%)
Query: 112 RKPVIQRPKLPRRISTSGMEECEICFSVLPTSIMTGLECGHRFCTQCWCEYLTTKIMEEG 171
+KP + + + SG +C IC ++T CGH FC C ++L ++
Sbjct: 23 QKPNLTTAPTAGQANESGCFDCNICLDTAHDPVVT--LCGHLFCWPCIYKWLHVQLSSVS 80
Query: 172 LGQTIACAAHACDILVDDATVMRLV 196
+ Q + C + + T+ LV
Sbjct: 81 VDQ----HQNNCPVCKSNITITSLV 101
Score = 29.1 bits (62), Expect = 7.2
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Query: 227 DCSNAIKVAYVEAAPVTCRCGHTFCFACGENW 258
DC+ + A+ PV CGH FC+ C W
Sbjct: 43 DCNICLDTAH---DPVVTLCGHLFCWPCIYKW 71
>At3g60350.1 68416.m06749 armadillo/beta-catenin repeat family
protein / F-box family protein contains Pfam profiles
PF00514: Armadillo/beta-catenin-like repeat, PF00646:
F-box domain; similar to F-box protein FBL2 (GI:6010699)
[Rattus norvegicus]
Length = 928
Score = 32.3 bits (70), Expect = 0.77
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 266 LLRKWIKKCDDDSETSNWIAANTKECPKCNVTIEKDGGCNHMVCKNQNCK 315
L+ +W CD E + AN KC++ + + GG + +V +NCK
Sbjct: 519 LIFRWPHGCDGVLERAAGALANLAADDKCSMEVARAGGVHALVMLARNCK 568
>At3g20010.1 68416.m02531 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to transcription
factor RUSH-1alpha [Oryctolagus cuniculus] GI:1655930;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 1047
Score = 31.9 bits (69), Expect = 1.0
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 85 DKEKLMERFYDGDQDQLFSEARVINPFRKPVIQRPKLPRRISTSGMEECEICFSVLPTSI 144
D +L++R Y+ D SEA V R P R +L R+ +S C C +
Sbjct: 708 DHPQLVKR-YNSDPVGKVSEAAVR---RLPREARSRLINRLESSSAI-CYECNEPPEKPV 762
Query: 145 MTGLECGHRFCTQCWCEYLT 164
+T CGH FC +C EY+T
Sbjct: 763 VT--LCGHIFCYECVLEYIT 780
>At3g43180.1 68416.m04557 zinc finger (C3HC4-type RING finger)
family protein contains Zinc finger, C3HC4 type (RING
finger) signature, PROSITE:PS00518
Length = 191
Score = 31.5 bits (68), Expect = 1.3
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Query: 133 CEICFS--VLPTSIMTGLECGHRFCTQCWCEYLTTKIME 169
C ICF V + + CGH+FC C +++ ++++E
Sbjct: 59 CRICFDEDVKAEQMYSVALCGHQFCVDCVKQHIESRLLE 97
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 31.5 bits (68), Expect = 1.3
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 133 CEICFSVLPTSIMTGLECGHRFCTQCWCEYLTTK 166
C IC ++ + +T CGH FC C +L K
Sbjct: 52 CPICMQIIKDAFLTA--CGHSFCYMCIITHLRNK 83
>At2g23780.1 68415.m02840 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type
Length = 227
Score = 31.5 bits (68), Expect = 1.3
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 132 ECEICFSVLPTSIMTGLECGHRFCTQCWCEYL 163
EC ICF + I+T CGH FC C +L
Sbjct: 27 ECNICFELAQDPIVT--LCGHLFCWPCLYRWL 56
>At1g63430.1 68414.m07173 leucine-rich repeat transmembrane protein
kinase, putative contains Pfam profiles: PF00069
Eukaryotic protein kinase domain, PF00560 Leucine Rich
Repeat; contains 1 predicted transmembrane domain
Length = 664
Score = 31.5 bits (68), Expect = 1.3
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 441 NQRDLESATETLSEYLERDITSENLADIKQKVQDKYRYCDSR 482
NQ DLE+ E S+ L RD T+ N K VQ+ +SR
Sbjct: 600 NQEDLETVCEVASQCLNRDPTNNNNNHNKPSVQELCETLESR 641
>At3g26730.1 68416.m03342 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 772
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 124 RISTSGMEECEICFSVLPTSIMTGLECGHRFCTQCWCEYLTTKI 167
R ST +C IC +T CGH FC C +YL T +
Sbjct: 236 RYSTPSPVQCPICLEYPLCPQITS--CGHIFCFPCILQYLLTGV 277
>At1g03770.1 68414.m00357 zinc finger (C3HC4-type RING finger)
family protein low similarity to polycomb-M33
interacting protein Ring1B [Mus musculus] GI:2239142;
contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 427
Score = 31.1 bits (67), Expect = 1.8
Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 132 ECEICFSVLPTSIMTGLECGHRFCTQC 158
+C IC ++ + T +EC HRFC +C
Sbjct: 102 QCSICLGIIRKT-RTVMECLHRFCREC 127
>At5g43530.1 68418.m05322 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger domain-containing
protein similar to SP|P36607 DNA repair protein rad8
{Schizosaccharomyces pombe}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain, PF00097: Zinc finger,
C3HC4 type (RING finger)
Length = 1277
Score = 30.7 bits (66), Expect = 2.4
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 9/74 (12%)
Query: 85 DKEKLMERFYDGDQDQLFSEARVINPFRKPVIQRPKLPRRISTSGMEECEICFSVLPTSI 144
D + L RF D + D + S+ + + VIQ + +EC IC +
Sbjct: 999 DLDSLARRFLDNNPDSV-SQNAPSRAYIEEVIQD------LRDGNSKECPICLESADDPV 1051
Query: 145 MTGLECGHRFCTQC 158
+T C HR C +C
Sbjct: 1052 LT--PCAHRMCREC 1063
>At2g22660.1 68415.m02685 glycine-rich protein
Length = 819
Score = 30.7 bits (66), Expect = 2.4
Identities = 10/33 (30%), Positives = 22/33 (66%)
Query: 389 MEEMQQHNMSWIEVQFLKKAVDILCQCRQTLMY 421
M++ + H + W+E Q ++ +VD+L +Q L++
Sbjct: 1 MDKEKDHEVEWLEAQKIEISVDLLAAAKQHLLF 33
>At1g06730.1 68414.m00715 pfkB-type carbohydrate kinase family
protein contains Pfam profile: PF00294 pfkB family
carbohydrate kinase
Length = 488
Score = 30.7 bits (66), Expect = 2.4
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Query: 297 TIEKDGGCNHMVCKNQNCKADFCWVCLGPWEPHGSSWYSCNRYDEDEAKA---ARDAQER 353
T+ +GG N + C+ CWV + P + HG C+R D E A D +
Sbjct: 174 TVALNGGTNEKDTSSF-CETLICWVLVDPLQRHG----FCSRADFKEEPAFSWITDLSDE 228
Query: 354 SRAAL-QRYLFYCNRY 368
+ A+ Q + +CN Y
Sbjct: 229 VKMAIRQSKVLFCNGY 244
>At5g53910.1 68418.m06708 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative contains Pfam
profile: PF00097 zinc finger, C3HC4 type (RING finger)
Length = 230
Score = 30.3 bits (65), Expect = 3.1
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 123 RRISTSGMEECEICFSVLPTSI-MTGLECGHRFCTQCWCEYLTTK 166
R +SG +C ICF T + L CGH F +C E+ +
Sbjct: 162 RETYSSGEYKCAICFQEFKTGREVATLLCGHEFDNKCIMEWFKVR 206
>At5g18420.3 68418.m02170 expressed protein non-consensus GC donor
splice site at exon 1, unknown (C40) protein, Homo
sapiens, EMBL:AF103798
Length = 439
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 28 VETHSTRERQTELEEYPYEVLSTEEIVQHMVDCIKEVNTVVEIPATTTRILLNH 81
VE + TE+ +Y YE L ++ H ++ + + T VE+P R+ + +
Sbjct: 317 VEILTKLNNSTEINDY-YEALGNMDMSLHSMEVVNRLTTAVELPKDFIRMYITN 369
>At5g18420.2 68418.m02169 expressed protein non-consensus GC donor
splice site at exon 1, unknown (C40) protein, Homo
sapiens, EMBL:AF103798
Length = 442
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 28 VETHSTRERQTELEEYPYEVLSTEEIVQHMVDCIKEVNTVVEIPATTTRILLNH 81
VE + TE+ +Y YE L ++ H ++ + + T VE+P R+ + +
Sbjct: 320 VEILTKLNNSTEINDY-YEALGNMDMSLHSMEVVNRLTTAVELPKDFIRMYITN 372
>At5g18420.1 68418.m02168 expressed protein non-consensus GC donor
splice site at exon 1, unknown (C40) protein, Homo
sapiens, EMBL:AF103798
Length = 441
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 28 VETHSTRERQTELEEYPYEVLSTEEIVQHMVDCIKEVNTVVEIPATTTRILLNH 81
VE + TE+ +Y YE L ++ H ++ + + T VE+P R+ + +
Sbjct: 320 VEILTKLNNSTEINDY-YEALGNMDMSLHSMEVVNRLTTAVELPKDFIRMYITN 372
>At1g67180.1 68414.m07642 zinc finger (C3HC4-type RING finger)
family protein / BRCT domain-containing protein contains
Pfam domains PF00533: BRCA1 C Terminus (BRCT) domain and
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 453
Score = 30.3 bits (65), Expect = 3.1
Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 13/92 (14%)
Query: 84 WDKEKLMERFYDGDQDQLFSEARVINPFRKPVIQRPKLPRRISTSGMEE------CEICF 137
WD +++ E + +F R +P KP Q R T E+ C IC+
Sbjct: 248 WDVDEI-EESENWSHSAVFKRPRSFSPEIKP--QDDDESTREETEATEKAPAQVSCIICW 304
Query: 138 SVLPTSIMTGLECGHRFCTQC---WCEYLTTK 166
+ +S L CGHRFC C W + L ++
Sbjct: 305 TEFSSSRGI-LPCGHRFCYSCIQKWADRLVSE 335
Score = 29.5 bits (63), Expect = 5.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 246 CGHTFCFACGENWHD 260
CGH FC++C + W D
Sbjct: 316 CGHRFCYSCIQKWAD 330
>At4g03510.2 68417.m00479 zinc finger (C3HC4-type RING finger)
family protein (RMA1) identical to RING zinc finger
protein RMA1 gi:3164222
Length = 249
Score = 29.9 bits (64), Expect = 4.1
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 241 PVTCRCGHTFCFACGENWHD 260
PV CGH FC+ C W D
Sbjct: 58 PVVTLCGHLFCWPCIHKWLD 77
Score = 28.7 bits (61), Expect = 9.5
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 100 QLFSEARVINPFRKPVIQRPKLPRRISTSGMEECEICFSVLPTSIMTGLECGHRFCTQCW 159
+L+ E +KP +P + +C IC + ++T CGH FC C
Sbjct: 15 ELYGEGAFCFKSKKPEPITVSVPSDDTDDSNFDCNICLDSVQEPVVT--LCGHLFCWPCI 72
Query: 160 CEYL 163
++L
Sbjct: 73 HKWL 76
>At4g03510.1 68417.m00478 zinc finger (C3HC4-type RING finger)
family protein (RMA1) identical to RING zinc finger
protein RMA1 gi:3164222
Length = 249
Score = 29.9 bits (64), Expect = 4.1
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 241 PVTCRCGHTFCFACGENWHD 260
PV CGH FC+ C W D
Sbjct: 58 PVVTLCGHLFCWPCIHKWLD 77
Score = 28.7 bits (61), Expect = 9.5
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 100 QLFSEARVINPFRKPVIQRPKLPRRISTSGMEECEICFSVLPTSIMTGLECGHRFCTQCW 159
+L+ E +KP +P + +C IC + ++T CGH FC C
Sbjct: 15 ELYGEGAFCFKSKKPEPITVSVPSDDTDDSNFDCNICLDSVQEPVVT--LCGHLFCWPCI 72
Query: 160 CEYL 163
++L
Sbjct: 73 HKWL 76
>At2g38920.1 68415.m04784 SPX (SYG1/Pho81/XPR1) domain-containing
protein / zinc finger (C3HC4-type RING finger)
protein-related weak similarity to tripartite motif
protein TRIM13 [Mus musculus] GI:12407427; contains Pfam
profile PF03105: SPX domain, weak hit to PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 335
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 113 KPVIQRPKLPRRISTSGMEECEICFSVLPTSIMTGLECGHRFCTQCWCEYLTTKIME 169
+PV++ LP I C IC + L+CGH FC C C + I +
Sbjct: 212 QPVLKL-MLPNSIELEYDLTCAICLETVFNPY--ALKCGHIFCNSCACSAASVLIFQ 265
>At2g26350.1 68415.m03163 zinc-binding peroxisomal integral membrane
protein (PEX10) identical to zinc-binding peroxisomal
integral membrane protein GI:4337011 from [Arabidopsis
thaliana]
Length = 381
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 126 STSGMEECEICFSVLPTSIMTGLECGHRFCTQCWCEYLTTK 166
ST + +C +C S T CGH FC C E+ K
Sbjct: 320 STEAVGKCTLCLSTRQHP--TATPCGHVFCWSCIMEWCNEK 358
Score = 28.7 bits (61), Expect = 9.5
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 241 PVTCRCGHTFCFACGENW-HDPVRCCLLR 268
P CGH FC++C W ++ C L R
Sbjct: 337 PTATPCGHVFCWSCIMEWCNEKQECPLCR 365
>At1g02860.1 68414.m00251 SPX (SYG1/Pho81/XPR1) domain-containing
protein / zinc finger (C3HC4-type RING finger)
protein-related weak similarity to tripartite motif
protein TRIM13 [Mus musculus] GI:12407427, gpStaf50
[Homo sapiens] GI:899300; contains Pfam profiles
PF03105: SPX domain, PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 335
Score = 29.9 bits (64), Expect = 4.1
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Query: 133 CEICFSVLPTSIMTGLECGHRFCTQCWCEYLTTKIMEEGLGQTIACAAHACDILVDD 189
C IC + I L CGH +C C C + +++ G A A C + +D
Sbjct: 231 CSICLDTVFDPI--SLTCGHIYCYMCACSAASVNVVD---GLKTAEATEKCPLCRED 282
>At3g24800.1 68416.m03112 PRT1 protein (PRT1) E3, N-end rule
ubiquitin ligase, contains two RING finger domain;
identical to PRT1 [Arabidopsis thaliana] GI:3319884
Length = 410
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 103 SEARVINPFRKPVIQRPKLPRRISTSGMEECEICFSVLPTSIMTGLECGHRFCTQC 158
++A+ +N +++ K+ ++IS + C C +L ++ L CGH +C C
Sbjct: 163 TDAKALNVHENELLKDNKVSKQISKDDLL-CSACKELLVRPVV--LNCGHVYCEGC 215
>At2g24480.1 68415.m02925 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger protein
RHY1a [Arabidopsis thaliana] GI:3790593; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 198
Score = 29.5 bits (63), Expect = 5.4
Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 251 CFACGENWHDPVRCCLLRKWIKKCDDDSETSNWIAANTKECPKCNVTIEK 300
C C EN C + + K C + + W+ + CP C ++K
Sbjct: 150 CAICLENMSRSENYCQM-PYCKHCYHEGCVTKWVIGHNNSCPLCRKPVDK 198
>At1g66860.1 68414.m07599 expressed protein similar to Hypothetical
protein RP404. (Swiss-Prot:Q9ZDC7) [Rickettsia
prowazekii]; similar to Hypothetical protein yvdE
homolog (Fragment) (Swiss-Prot:P22347) [Lactococcus
lactis]
Length = 433
Score = 29.5 bits (63), Expect = 5.4
Identities = 17/73 (23%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 24 FAMDVETHSTRERQTELEEYPYE--VLSTEEIVQHMVDCIKEVNTVVEIPATTTRILLNH 81
F M ++ H R R+ +E+ + ++ +E + ++ C K+VN+ + +P ++ LN
Sbjct: 248 FLMGLQFHPERMRKNGSDEFDFPGCPVAYQEFAKAVIACQKKVNSFLSVP---KKLELNP 304
Query: 82 FKWDKEKLMERFY 94
+K K++ R +
Sbjct: 305 EMENKRKILVRSF 317
>At1g47570.1 68414.m05281 zinc finger (C3HC4-type RING finger)
family protein contains Pfam PF00097: Zinc finger, C3HC4
type (RING finger)
Length = 466
Score = 29.5 bits (63), Expect = 5.4
Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 132 ECEICFSVLPTSIMTGLECGHRFCTQCWCEYL 163
+C IC ++ ++T C H FC C+ E++
Sbjct: 137 KCSICLNIWH-DVVTAAPCLHNFCNGCFSEWM 167
>At1g19310.1 68414.m02401 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 226
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query: 132 ECEICFSVLPTSIMTGLECGHRFCTQCWCEYL 163
EC IC + I+T CGH FC C ++L
Sbjct: 22 ECNICLDLAQDPIVT--LCGHLFCWPCLYKWL 51
>At4g12150.1 68417.m01930 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 357
Score = 29.1 bits (62), Expect = 7.2
Identities = 24/108 (22%), Positives = 40/108 (37%), Gaps = 10/108 (9%)
Query: 160 CEYLTTKIMEEGLGQTIACAAHACDILVDDATVMRLVRDSRVKLKYQHIITNSFVECNRL 219
C++L KI A ++ D+ V A + VR LK ++ F+
Sbjct: 93 CDHLVPKISS-------AISSGFVDLTVSVAVTYKYVRVDEAALKISRMVLQGFMSVEET 145
Query: 220 LRWCPSPDCSNAIK--VAYVEAAPVTCRCGHTFCFACGENWHDPVRCC 265
+ + CS ++ V+ + AP C H F C W + C
Sbjct: 146 -KSLNAESCSICLQSLVSSSKTAPTRMSCSHVFHNGCLVEWLNRKNTC 192
>At4g12140.1 68417.m01928 zinc finger (C3HC4-type RING finger)
family protein low similarity to RING-H2 finger proteins
RHG1a [Arabidopsis thaliana] GI:3822225, RHY1a
[Arabidopsis thaliana] GI:3790593; contains Pfam profile
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 202
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Query: 131 EECEICFSVLPTSIMTG---LECGHRFCTQCWCEYLTTK 166
+ C IC L +S TG + C H F + C E+L K
Sbjct: 151 DSCSICLQSLVSSSKTGPTRMSCSHVFHSSCLVEWLKRK 189
>At4g10940.1 68417.m01779 PHD finger family protein contains Pfam
profile: PF00097 zinc finger, C3HC4 type
Length = 192
Score = 29.1 bits (62), Expect = 7.2
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 246 CGHTFCFACGENWHDPVRCCLL 267
C H FCF C +NW + C L
Sbjct: 47 CQHWFCFECIDNWSTIMNLCPL 68
>At1g78420.1 68414.m09138 expressed protein
Length = 401
Score = 29.1 bits (62), Expect = 7.2
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 5/80 (6%)
Query: 86 KEKLMERFYDGDQDQLFSEARVINPFRKPVIQRPKLP----RRISTSGMEECEICFSVLP 141
K +++E Y Q ++ + RK +++ P S +EEC ICF P
Sbjct: 8 KRQVVEERYTKPQGLYVNKDVDVKKLRKLIVESKLAPCYPGDDESCHDLEECPICFLYYP 67
Query: 142 TSIMTGLECGHRFCTQCWCE 161
S+ C CT+C+ +
Sbjct: 68 -SLNRSRCCMKSICTECFLQ 86
>At1g57820.2 68414.m06561 zinc finger (C3HC4-type RING finger)
family protein low similarity to nuclear protein np95
[Mus musculus] GI:4220590; contains Pfam profiles
PF02182: YDG/SRA domain, PF00097: Zinc finger, C3HC4
type (RING finger), PF00628: PHD-finger
Length = 642
Score = 29.1 bits (62), Expect = 7.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Query: 241 PVTCRCGHTFCFACGENW 258
PVT CGH C C E W
Sbjct: 156 PVTKPCGHNACLKCFEKW 173
>At1g57820.1 68414.m06560 zinc finger (C3HC4-type RING finger)
family protein low similarity to nuclear protein np95
[Mus musculus] GI:4220590; contains Pfam profiles
PF02182: YDG/SRA domain, PF00097: Zinc finger, C3HC4
type (RING finger), PF00628: PHD-finger
Length = 645
Score = 29.1 bits (62), Expect = 7.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Query: 241 PVTCRCGHTFCFACGENW 258
PVT CGH C C E W
Sbjct: 156 PVTKPCGHNACLKCFEKW 173
>At1g45180.1 68414.m05180 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 645
Score = 29.1 bits (62), Expect = 7.2
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 126 STSGMEECEICFSVLPTSIMTG-LECGHRFCTQCWCEYLTTK 166
S+ +E C +C G LECGH F +QC E+L K
Sbjct: 585 SSQEVEPCCVCQEEYKEEEEIGRLECGHDFHSQCIKEWLKQK 626
>At5g65710.1 68418.m08270 leucine-rich repeat transmembrane protein
kinase, putative
Length = 993
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 69 EIPATTTRILLNHFKWDKEKLMERFYDGDQDQLFSEARVINP 110
EIPA R+ LN F KL + G Q +F + + NP
Sbjct: 570 EIPAELLRLKLNQFNVSDNKLYGKIPSGFQQDIFRPSFLGNP 611
>At4g28270.1 68417.m04049 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 193
Score = 28.7 bits (61), Expect = 9.5
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 241 PVTCRCGHTFCFACGENW 258
PV CGH FC+ C W
Sbjct: 31 PVVTLCGHLFCWPCIHKW 48
>At3g01650.1 68416.m00096 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 489
Score = 28.7 bits (61), Expect = 9.5
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 102 FSEARVINPFRKPVIQRPKLPRRISTSG-MEECEICFSVLPTSIMTGLECGHRFCTQC 158
FS +R+ N F V P +++S++ ++ C IC S P ++ G CGH+ C +C
Sbjct: 415 FSSSRIPN-FEPSVPPYPFESKQMSSADDIQLCPICLSN-PKNMAFG--CGHQTCCEC 468
>At2g01620.1 68415.m00088 expressed protein
Length = 292
Score = 28.7 bits (61), Expect = 9.5
Identities = 10/33 (30%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 291 CPKCNVTIEKDGGCNHMVCKNQNCKADFCWVCL 323
CPKC+ + C+ C + K CW+C+
Sbjct: 173 CPKCD-EVRMIPSCSRESCNQKQRKCRGCWLCI 204
>At1g73760.1 68414.m08540 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 367
Score = 28.7 bits (61), Expect = 9.5
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 113 KPVIQRPKLPRRISTSGMEECEICFSVLPTSIMTG-LECGHRFCTQCWCEYLTTK 166
K +++ K R+ +T +C IC G L CGHRF C ++L K
Sbjct: 299 KSCLRKVKPCRQDTTVADRKCIICQDEYEAKDEVGELRCGHRFHIDCVNQWLVRK 353
>At1g67800.3 68414.m07738 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 433
Score = 28.7 bits (61), Expect = 9.5
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 234 VAYVEAAPVTCRCGHTFCFACGENWH 259
V V A + CGH C CGE+ H
Sbjct: 392 VCLVSAKNMAFNCGHQTCAGCGEDLH 417
>At1g67800.2 68414.m07739 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 453
Score = 28.7 bits (61), Expect = 9.5
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 234 VAYVEAAPVTCRCGHTFCFACGENWH 259
V V A + CGH C CGE+ H
Sbjct: 412 VCLVSAKNMAFNCGHQTCAGCGEDLH 437
>At1g67800.1 68414.m07737 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 433
Score = 28.7 bits (61), Expect = 9.5
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 234 VAYVEAAPVTCRCGHTFCFACGENWH 259
V V A + CGH C CGE+ H
Sbjct: 392 VCLVSAKNMAFNCGHQTCAGCGEDLH 417
>At1g50410.1 68414.m05650 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to transcription
factor RUSH-1alpha [Oryctolagus cuniculus] GI:1655930;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 981
Score = 28.7 bits (61), Expect = 9.5
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 85 DKEKLMERFYDGDQDQLFSEARVINPFRKPVIQRPKLPRRISTSGMEECEICFSVLPTSI 144
D +L++R Y+ D SE V ++ ++ L R+ +S + C +C +
Sbjct: 637 DHPQLVKR-YNSDSVGKVSEEAVKKLPKEDLVS---LLSRLESSPI--CCVCHDPPEDPV 690
Query: 145 MTGLECGHRFCTQCWCEYLT 164
+T CGH FC QC +Y+T
Sbjct: 691 VT--LCGHIFCYQCVSDYIT 708
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.322 0.134 0.433
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,282,438
Number of Sequences: 28952
Number of extensions: 526854
Number of successful extensions: 1996
Number of sequences better than 10.0: 103
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 1671
Number of HSP's gapped (non-prelim): 196
length of query: 503
length of database: 12,070,560
effective HSP length: 84
effective length of query: 419
effective length of database: 9,638,592
effective search space: 4038570048
effective search space used: 4038570048
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 61 (28.7 bits)
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