Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001416-TA|BGIBMGA001416-PA|IPR001680|WD-40 repeat,
IPR011046|WD40-like, IPR011041|Soluble quinoprotein glucose
dehydrogenase, IPR011045|Nitrous oxide reductase, N-terminal
(3007 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 27 1.5
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 27 2.0
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 27 2.0
AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. 27 2.6
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 26 3.4
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 26 3.4
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 26 3.4
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 26 3.4
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 26 3.4
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 26 3.4
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 26 3.4
DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 26 4.5
AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein p... 25 6.0
AY052625-1|AAL15473.1| 135|Tribolium castaneum tryptophan oxyge... 25 7.9
AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan oxyge... 25 7.9
AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan oxyge... 25 7.9
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 25 7.9
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 27.5 bits (58), Expect = 1.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 186 THHLAFSPDGVLFATSGVNDRLVKIWYQNK 215
T +LA L A+ G+ VKIW+QN+
Sbjct: 143 TQYLALPERAELAASLGLTQTQVKIWFQNR 172
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 27.1 bits (57), Expect = 2.0
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 197 LFATSGVNDRLVKIWYQNK 215
L A G+N+ +KIW+QNK
Sbjct: 261 LSAELGLNEAQIKIWFQNK 279
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 27.1 bits (57), Expect = 2.0
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 466 CTHLPD-SLDAKIEVLLRDWHQSPDLLFSIH 495
CTH D L+A +EV+L D QSP+L H
Sbjct: 568 CTHQVDIPLNAIVEVVLVDEVQSPNLSHPFH 598
>AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein.
Length = 290
Score = 26.6 bits (56), Expect = 2.6
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 2106 EMKMDQNDDEGPAVPGTSDNKEAEETP 2132
E K+D+ DD+ PA+ +A++TP
Sbjct: 113 ENKLDKKDDDSPALRALLTRPQAKKTP 139
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 26.2 bits (55), Expect = 3.4
Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 2404 VVTTPPNKWPAESGAEDVDESGSETDDDDIFDTSNTKPEKRRKGANTEHSDPDSYSWL 2461
V T+PP K + ++++ S T + + T + G ++ + P Y W+
Sbjct: 149 VSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSS--NPPQIYPWM 204
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 26.2 bits (55), Expect = 3.4
Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 2404 VVTTPPNKWPAESGAEDVDESGSETDDDDIFDTSNTKPEKRRKGANTEHSDPDSYSWL 2461
V T+PP K + ++++ S T + + T + G ++ + P Y W+
Sbjct: 149 VSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSS--NPPQIYPWM 204
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 26.2 bits (55), Expect = 3.4
Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 2404 VVTTPPNKWPAESGAEDVDESGSETDDDDIFDTSNTKPEKRRKGANTEHSDPDSYSWL 2461
V T+PP K + ++++ S T + + T + G ++ + P Y W+
Sbjct: 149 VSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSS--NPPQIYPWM 204
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 26.2 bits (55), Expect = 3.4
Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 2404 VVTTPPNKWPAESGAEDVDESGSETDDDDIFDTSNTKPEKRRKGANTEHSDPDSYSWL 2461
V T+PP K + ++++ S T + + T + G ++ + P Y W+
Sbjct: 149 VSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSS--NPPQIYPWM 204
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 26.2 bits (55), Expect = 3.4
Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 2404 VVTTPPNKWPAESGAEDVDESGSETDDDDIFDTSNTKPEKRRKGANTEHSDPDSYSWL 2461
V T+PP K + ++++ S T + + T + G ++ + P Y W+
Sbjct: 105 VSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSS--NPPQIYPWM 160
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 26.2 bits (55), Expect = 3.4
Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 2404 VVTTPPNKWPAESGAEDVDESGSETDDDDIFDTSNTKPEKRRKGANTEHSDPDSYSWL 2461
V T+PP K + ++++ S T + + T + G ++ + P Y W+
Sbjct: 149 VSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSS--NPPQIYPWM 204
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced Scr
protein.
Length = 312
Score = 26.2 bits (55), Expect = 3.4
Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Query: 2404 VVTTPPNKWPAESGAEDVDESGSETDDDDIFDTSNTKPEKRRKGANTEHSDPDSYSWL 2461
V T+PP K + ++++ S T + + T + G ++ + P Y W+
Sbjct: 149 VSTSPPGKPATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSS--NPPQIYPWM 204
>DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired
protein.
Length = 311
Score = 25.8 bits (54), Expect = 4.5
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 2409 PNKWPAESGAEDVDESGSETDDDDIFDTSNTKPEKRRKGANTEHSDPDSYSWLVMRVAVL 2468
P P E+ D D T D S PEK + ++ P SY+ L+M +A+
Sbjct: 40 PENHP-ETELSDSDCDLDVTGTPPPLDCSKNSPEKESEEKKSKEKPPYSYNALIM-MAIR 97
Query: 2469 RLAQKNL 2475
+K L
Sbjct: 98 NSPEKRL 104
>AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein
protein.
Length = 249
Score = 25.4 bits (53), Expect = 6.0
Identities = 8/14 (57%), Positives = 13/14 (92%)
Query: 202 GVNDRLVKIWYQNK 215
G+++R VKIW+QN+
Sbjct: 194 GLSERQVKIWFQNR 207
>AY052625-1|AAL15473.1| 135|Tribolium castaneum tryptophan oxygenase
protein.
Length = 135
Score = 25.0 bits (52), Expect = 7.9
Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 2129 EETPTVDIMAQQLKFVACLKILMEELSTLATGFEVDGGHLRFQLYI 2174
EE+ T++I+ + + V LK+L++++ L T +D + F+ Y+
Sbjct: 24 EESQTLEILKRLNRVVLILKVLVDQVMILETMTPLD--FMDFRCYL 67
>AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan oxygenase
protein.
Length = 388
Score = 25.0 bits (52), Expect = 7.9
Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 2129 EETPTVDIMAQQLKFVACLKILMEELSTLATGFEVDGGHLRFQLYI 2174
EE+ T++I+ + + V LK+L++++ L T +D + F+ Y+
Sbjct: 84 EESQTLEILKRLNRVVLILKVLVDQVMILETMTPLD--FMDFRCYL 127
>AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan oxygenase
protein.
Length = 388
Score = 25.0 bits (52), Expect = 7.9
Identities = 13/46 (28%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 2129 EETPTVDIMAQQLKFVACLKILMEELSTLATGFEVDGGHLRFQLYI 2174
EE+ T++I+ + + V LK+L++++ L T +D + F+ Y+
Sbjct: 84 EESQTLEILKRLNRVVLILKVLVDQVMILETMTPLD--FMDFRCYL 127
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 25.0 bits (52), Expect = 7.9
Identities = 7/14 (50%), Positives = 13/14 (92%)
Query: 202 GVNDRLVKIWYQNK 215
G+++R +KIW+QN+
Sbjct: 195 GLSERQIKIWFQNR 208
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.318 0.133 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 697,170
Number of Sequences: 317
Number of extensions: 29895
Number of successful extensions: 110
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 103
Number of HSP's gapped (non-prelim): 25
length of query: 3007
length of database: 114,650
effective HSP length: 70
effective length of query: 2937
effective length of database: 92,460
effective search space: 271555020
effective search space used: 271555020
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 52 (25.0 bits)
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