Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001416-TA|BGIBMGA001416-PA|IPR001680|WD-40 repeat,
IPR011046|WD40-like, IPR011041|Soluble quinoprotein glucose
dehydrogenase, IPR011045|Nitrous oxide reductase, N-terminal
(3007 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g46560.1 68415.m05808 transducin family protein / WD-40 repea... 122 3e-27
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 69 4e-11
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 65 6e-10
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 61 1e-08
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 61 1e-08
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 61 1e-08
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 50 2e-05
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 50 2e-05
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 50 2e-05
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 48 1e-04
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 48 1e-04
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 47 2e-04
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 46 3e-04
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 46 5e-04
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 45 0.001
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 44 0.001
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 43 0.003
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 43 0.004
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 42 0.006
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 42 0.009
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 41 0.011
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 40 0.020
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 40 0.020
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 40 0.034
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 40 0.034
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 40 0.034
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 40 0.034
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 39 0.045
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 39 0.045
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 39 0.060
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 38 0.079
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 38 0.079
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 38 0.079
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 38 0.14
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 38 0.14
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 38 0.14
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 38 0.14
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 38 0.14
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 38 0.14
At2g20710.2 68415.m02432 pentatricopeptide (PPR) repeat-containi... 38 0.14
At2g20710.1 68415.m02431 pentatricopeptide (PPR) repeat-containi... 38 0.14
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 38 0.14
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 37 0.18
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 37 0.18
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 37 0.18
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 37 0.18
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 37 0.18
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 37 0.18
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 37 0.18
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 37 0.18
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 37 0.24
At3g16320.1 68416.m02061 cell division cycle family protein / CD... 37 0.24
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 37 0.24
At5g01770.1 68418.m00096 transducin family protein / WD-40 repea... 36 0.32
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 36 0.32
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 36 0.32
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 36 0.32
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 36 0.42
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 36 0.42
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 36 0.42
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 36 0.42
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 36 0.42
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 36 0.42
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 36 0.56
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 36 0.56
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 35 0.74
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 35 0.74
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 35 0.74
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 35 0.98
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 34 1.3
At4g24330.1 68417.m03492 expressed protein hypothetical protein ... 34 1.3
At3g08850.1 68416.m01029 transducin family protein / WD-40 repea... 34 1.3
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 34 1.3
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 34 1.7
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 34 1.7
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 33 2.3
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 33 2.3
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 33 2.3
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 33 2.3
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 33 2.3
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 33 3.0
At5g40450.1 68418.m04905 expressed protein 33 3.9
At5g24740.1 68418.m02920 expressed protein 33 3.9
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 33 3.9
At2g34260.2 68415.m04192 transducin family protein / WD-40 repea... 33 3.9
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 33 3.9
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 33 3.9
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 32 5.2
At3g44750.1 68416.m04817 histone deacetylase, putative (HD2A) co... 32 5.2
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 32 6.9
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 32 6.9
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 32 6.9
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 32 6.9
At5g58350.1 68418.m07306 protein kinase family protein contains ... 32 6.9
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 32 6.9
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 32 6.9
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 32 6.9
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 32 6.9
At1g80950.1 68414.m09498 phospholipid/glycerol acyltransferase f... 32 6.9
At1g60095.1 68414.m06771 jacalin lectin family protein contains ... 32 6.9
At1g04700.1 68414.m00467 protein kinase family protein low simil... 32 6.9
At4g31570.1 68417.m04483 expressed protein 31 9.1
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 31 9.1
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 31 9.1
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 31 9.1
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 31 9.1
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 31 9.1
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 31 9.1
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 31 9.1
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 31 9.1
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 31 9.1
At1g35920.1 68414.m04461 hypothetical protein includes At5g34960... 31 9.1
>At2g46560.1 68415.m05808 transducin family protein / WD-40 repeat
family protein similar to CPY (GI:3096961) {Chironomus
thummi}; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies, 3 weak)|9780477|gb|BE522499.1|BE522499
Length = 2471
Score = 122 bits (295), Expect = 3e-27
Identities = 85/269 (31%), Positives = 136/269 (50%), Gaps = 24/269 (8%)
Query: 1673 SLDDCGLRFLLAMKHYGYLLRCLPLAQRAALQRTGVGTCNLVWAFHSETHEQLL-ALVPG 1731
SLD+ G RF + ++ + L + A+L+ + + + WAFHSE+ E L +L+P
Sbjct: 1167 SLDEPGRRFWVTLR-FKQLFLARSSGKTASLEELDIDSSMIGWAFHSESQENLSGSLLPN 1225
Query: 1732 YAKGQPKWTTMRELGVGWWIRGEL-LRTSVEKLARAAYMQKQDPMDAALYYLAMKKRMLL 1790
+ W MR G G+W LR+ +EKLAR Y++ ++P D AL Y+A+ + +L
Sbjct: 1226 ----ESSWQQMRSQGFGFWYSNAAQLRSRMEKLARQQYLKNKNPKDCALLYIALNRVQVL 1281
Query: 1791 WGLFRSNRDDK---MTAFFANDFTENRWRKAALKNAFVLLGKQRFEHXXXXXXXXXXXKD 1847
GLF+ ++D+K + F + +F E + + AALKNA+VL+GK + E
Sbjct: 1282 AGLFKLSKDEKDKPLVVFLSRNFQEEKNKAAALKNAYVLMGKHQLELAIGFFLLGGEASS 1341
Query: 1848 ALEVLITRLGDLQLAMIVARLYESDNVLPASLKKLLMDEILGGETEDGEIDLERAHPDPF 1907
A+ V + L D QLA+++ RL + A L+ IL + G D +
Sbjct: 1342 AINVCVKNLQDEQLALVICRLIDGQG--GALESNLIKKYILPSAVQRG---------DFW 1390
Query: 1908 VRSMALWELKRYGDSLDTLLSPAGRLHAP 1936
+ S+ WEL Y S +L+ AG L P
Sbjct: 1391 LASLLKWELGEYHRS---ILAMAGCLENP 1416
Score = 82.6 bits (195), Expect = 4e-15
Identities = 62/198 (31%), Positives = 95/198 (47%), Gaps = 24/198 (12%)
Query: 2722 PVGMASQTGRGASVHYNMYADLTGGADGSVQLWEFGHPSCVWS----PRA----PGAFAK 2773
P + S R S H M L G ++ + LWEFG+ + P A P A A
Sbjct: 2149 PPTVESVITRAFSNHPTMPLFLVGSSNTHIYLWEFGNERATATYGVLPAANVSPPYALAS 2208
Query: 2774 VTRIRFSDYGNKFAASDADGNLAMWHLHPAPQYHEAQNQASRRPFFTHQCHSKGISDFVF 2833
++ ++F +G++FA++ DG + W E +++ P + C + SD +
Sbjct: 2209 ISAVQFGPFGHRFASAALDGTVCTWQ-------SEVGGRSNIHPVESSLCFNGHASDVGY 2261
Query: 2834 LGSC-SLVATAGHSSESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAG---GSGS-- 2887
+ S S+VA +G+SS NV +WDTL P S CHEGGA ++ GSGS
Sbjct: 2262 ISSSGSIVAASGYSSSGANVVVWDTLAP-PSTSQASINCHEGGARSISVFDNDIGSGSIS 2320
Query: 2888 --LVSCGRRGDVLVWDVR 2903
+V+ G+ GDV + D R
Sbjct: 2321 PMIVTGGKNGDVGLHDFR 2338
Score = 40.7 bits (91), Expect = 0.015
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 2912 QAHHAQIKCLALAPLEDLYALGAADGDIKVFSLTTHQLLYTFAGEHARSSFFKH------ 2965
+AH + +A P L+ G+ DG++K++ +L++ + H R +F +
Sbjct: 2372 KAHLGSVTKIATIPRTSLFLTGSKDGEVKLWDAKAAKLIHHWPKLHERHTFLQPNSRGYG 2431
Query: 2966 --IGQGVTQIYIDNAGRLFSCGADGTMK 2991
I GVT I + G +CG DGT+K
Sbjct: 2432 GIIRAGVTDIQVCPNG-FITCGGDGTVK 2458
Score = 33.5 bits (73), Expect = 2.3
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 230 NYTFIYVAHPRAVTHLSWRKTSKYMPKGSVG----NVLVTSCVDNICRVWAE 277
+Y + HP+ ++ + WR + +G NVL+T C+D R+W E
Sbjct: 230 SYHNFELPHPQRISMIQWRPMAAEQSAIGIGKSMRNVLMTCCLDGAVRLWCE 281
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 69.3 bits (162), Expect = 4e-11
Identities = 67/250 (26%), Positives = 102/250 (40%), Gaps = 30/250 (12%)
Query: 2743 LTGGADGSVQLWEFGHPSCVWSPRAPGAFAKVTRIRFSDYGNKFAASDADGNLAMWHLHP 2802
+TGG D V LW G P+ + S G + V + F A + G + +W +
Sbjct: 32 ITGGDDYKVNLWAIGKPTSLMS--LCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEE 89
Query: 2803 APQYHEAQNQASRRPFFTHQCHSKGISDFVFLGSCSLVATAGHSSESKNVAIWDTLMPIK 2862
A R F H+ + + +F G A SS++ N+ IWD K
Sbjct: 90 AKMV---------RAFTGHRSNCSAV-EFHPFGEF----LASGSSDA-NLKIWDIR---K 131
Query: 2863 KALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLA 2922
K + ++ H G + + + +VS G V VWD+ + H + H I+ L
Sbjct: 132 KGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLD 191
Query: 2923 LAPLEDLYALGAADGDIKVFSLTTHQLLYTFAGEHARSSFFKHIGQGVTQIYIDNAGRLF 2982
PLE L A G+AD +K + L T +L+ + E GV I GR
Sbjct: 192 FHPLEFLLATGSADRTVKFWDLETFELIGSTRPE----------ATGVRSIKFHPDGRTL 241
Query: 2983 SCGADGTMKV 2992
CG D ++KV
Sbjct: 242 FCGLDDSLKV 251
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 65.3 bits (152), Expect = 6e-10
Identities = 57/209 (27%), Positives = 83/209 (39%), Gaps = 22/209 (10%)
Query: 2743 LTGGADGSVQLWEFGHPSCVWSPRAPGAFAKVTRIRFSDYGNKFAASDADGNLAMWHLHP 2802
+TGG D V LW G P+ + S G + + + F AA A G + +W L
Sbjct: 126 VTGGEDHKVNLWAIGKPNAILS--LYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEE 183
Query: 2803 APQYHEAQNQASRRPFFTHQCHSKGISDF-VFLGSCSLVATAGHSSESKNVAIWDTLMPI 2861
A S C S F F S SL N+ IWD
Sbjct: 184 AKVVRTLTGHRSN-------CVSVNFHPFGEFFASGSL---------DTNLKIWDIR--- 224
Query: 2862 KKALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCL 2921
KK + ++ H G + + +VS G V VWD+ + H ++H +I+ L
Sbjct: 225 KKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSL 284
Query: 2922 ALAPLEDLYALGAADGDIKVFSLTTHQLL 2950
P E L A G+AD +K + L T +L+
Sbjct: 285 DFHPHEFLLATGSADKTVKFWDLETFELI 313
Score = 44.4 bits (100), Expect = 0.001
Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 8/137 (5%)
Query: 2824 HSKGISDFVFLGSCSLVATAGHSSESKNVAIWDTLMPIKKALVV-SWTCHEGGAACVAWA 2882
HS GI F S LVA AG +S + + +WD +++A VV + T H V +
Sbjct: 151 HSSGIDSVTFDASEGLVA-AGAASGT--IKLWD----LEEAKVVRTLTGHRSNCVSVNFH 203
Query: 2883 GGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVF 2942
S ++ +WD+R + H + H + L P G D +KV+
Sbjct: 204 PFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVW 263
Query: 2943 SLTTHQLLYTFAGEHAR 2959
LT +LL+ F +
Sbjct: 264 DLTAGKLLHEFKSHEGK 280
Score = 37.5 bits (83), Expect = 0.14
Identities = 41/199 (20%), Positives = 73/199 (36%), Gaps = 21/199 (10%)
Query: 2745 GGADGSVQLWEFGHPSCVWSPRAPGAFAKVTRIRFSDYGNKFAASDADGNLAMWHLHPAP 2804
G A G+++LW+ V + G + + F +G FA+ D NL +W +
Sbjct: 170 GAASGTIKLWDLEEAKVVRT--LTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKG 227
Query: 2805 QYHEAQNQASRRPFFTHQCHSKGISDFVFLGSCSLVATAGHSSESKNVAIWDTLMPIKKA 2864
H T++ H++G++ F + + G E V +WD
Sbjct: 228 CIH------------TYKGHTRGVNVLRFTPDGRWIVSGG---EDNVVKVWDL---TAGK 269
Query: 2865 LVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALA 2924
L+ + HEG + + L + V WD+ T + ++CL
Sbjct: 270 LLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFN 329
Query: 2925 PLEDLYALGAADGDIKVFS 2943
P + L +K+FS
Sbjct: 330 P-DGKSVLCGLQESLKIFS 347
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 60.9 bits (141), Expect = 1e-08
Identities = 65/251 (25%), Positives = 97/251 (38%), Gaps = 32/251 (12%)
Query: 2743 LTGGADGSVQLWEFGHPSCVWSPRAPGAFAKVTRIRFSDYGNKFAASDADGNLAMWHLHP 2802
+TGG D V LW G P+ + S G + + + F AA A G + +W L
Sbjct: 33 VTGGEDHKVNLWAIGKPNAILS--LYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEE 90
Query: 2803 APQYHEAQNQASRRPFFTHQCHSKGISDF-VFLGSCSLVATAGHSSESKNVAIWDTLMPI 2861
A S C S F F S SL N+ IWD
Sbjct: 91 AKIVRTLTGHRSN-------CISVDFHPFGEFFASGSL---------DTNLKIWDIR--- 131
Query: 2862 KKALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCL 2921
KK + ++ H G + + +VS G V VWD+ + ++H QI+ L
Sbjct: 132 KKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSL 191
Query: 2922 ALAPLEDLYALGAADGDIKVFSLTTHQLLYTFAGEHARSSFFKHIGQGVTQIYIDNAGRL 2981
P E L A G+AD +K + L T +L+ + E A GV + + G+
Sbjct: 192 DFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETA----------GVRCLSFNPDGKT 241
Query: 2982 FSCGADGTMKV 2992
CG ++K+
Sbjct: 242 VLCGLQESLKI 252
Score = 39.5 bits (88), Expect = 0.034
Identities = 43/199 (21%), Positives = 75/199 (37%), Gaps = 21/199 (10%)
Query: 2745 GGADGSVQLWEFGHPSCVWSPRAPGAFAKVTRIRFSDYGNKFAASDADGNLAMWHLHPAP 2804
G A G+++LW+ V + G + + F +G FA+ D NL +W +
Sbjct: 77 GAASGTIKLWDLEEAKIVRT--LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
Query: 2805 QYHEAQNQASRRPFFTHQCHSKGISDFVFLGSCSLVATAGHSSESKNVAIWDTLMPIKKA 2864
H T++ H++G++ F V + G E V +WD
Sbjct: 135 CIH------------TYKGHTRGVNVLRFTPDGRWVVSGG---EDNIVKVWDL---TAGK 176
Query: 2865 LVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALA 2924
L+ + HEG + + L + V WD+ T + A ++CL+
Sbjct: 177 LLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFN 236
Query: 2925 PLEDLYALGAADGDIKVFS 2943
P + L +K+FS
Sbjct: 237 P-DGKTVLCGLQESLKIFS 254
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 60.9 bits (141), Expect = 1e-08
Identities = 65/251 (25%), Positives = 97/251 (38%), Gaps = 32/251 (12%)
Query: 2743 LTGGADGSVQLWEFGHPSCVWSPRAPGAFAKVTRIRFSDYGNKFAASDADGNLAMWHLHP 2802
+TGG D V LW G P+ + S G + + + F AA A G + +W L
Sbjct: 33 VTGGEDHKVNLWAIGKPNAILS--LYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEE 90
Query: 2803 APQYHEAQNQASRRPFFTHQCHSKGISDF-VFLGSCSLVATAGHSSESKNVAIWDTLMPI 2861
A S C S F F S SL N+ IWD
Sbjct: 91 AKIVRTLTGHRSN-------CISVDFHPFGEFFASGSL---------DTNLKIWDIR--- 131
Query: 2862 KKALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCL 2921
KK + ++ H G + + +VS G V VWD+ + ++H QI+ L
Sbjct: 132 KKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSL 191
Query: 2922 ALAPLEDLYALGAADGDIKVFSLTTHQLLYTFAGEHARSSFFKHIGQGVTQIYIDNAGRL 2981
P E L A G+AD +K + L T +L+ + E A GV + + G+
Sbjct: 192 DFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETA----------GVRCLSFNPDGKT 241
Query: 2982 FSCGADGTMKV 2992
CG ++K+
Sbjct: 242 VLCGLQESLKI 252
Score = 39.5 bits (88), Expect = 0.034
Identities = 43/199 (21%), Positives = 75/199 (37%), Gaps = 21/199 (10%)
Query: 2745 GGADGSVQLWEFGHPSCVWSPRAPGAFAKVTRIRFSDYGNKFAASDADGNLAMWHLHPAP 2804
G A G+++LW+ V + G + + F +G FA+ D NL +W +
Sbjct: 77 GAASGTIKLWDLEEAKIVRT--LTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKG 134
Query: 2805 QYHEAQNQASRRPFFTHQCHSKGISDFVFLGSCSLVATAGHSSESKNVAIWDTLMPIKKA 2864
H T++ H++G++ F V + G E V +WD
Sbjct: 135 CIH------------TYKGHTRGVNVLRFTPDGRWVVSGG---EDNIVKVWDL---TAGK 176
Query: 2865 LVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALA 2924
L+ + HEG + + L + V WD+ T + A ++CL+
Sbjct: 177 LLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFN 236
Query: 2925 PLEDLYALGAADGDIKVFS 2943
P + L +K+FS
Sbjct: 237 P-DGKTVLCGLQESLKIFS 254
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 60.9 bits (141), Expect = 1e-08
Identities = 43/146 (29%), Positives = 64/146 (43%), Gaps = 13/146 (8%)
Query: 2847 SESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRL 2906
S N+ +WDT KK + ++ H G + + ++ +VS G V VWD+
Sbjct: 68 SSDTNLRVWDTR---KKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGK 124
Query: 2907 VRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFSLTTHQLLYTFAGEHARSSFFKHI 2966
+ H + H I+ L PLE L A G+AD +K + L T +L+ T E
Sbjct: 125 LLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPE---------- 174
Query: 2967 GQGVTQIYIDNAGRLFSCGADGTMKV 2992
GV I G+ CG D +KV
Sbjct: 175 ATGVRAIAFHPDGQTLFCGLDDGLKV 200
Score = 36.7 bits (81), Expect = 0.24
Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 5/124 (4%)
Query: 2830 DFVFLGSCSLVATAGHSSESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAGGSGSLV 2889
D V S ++ AG SS + +WD + +V ++T H + V + L
Sbjct: 11 DSVAFNSEEVLVLAGASSGV--IKLWDLE---ESKMVRAFTGHRSNCSAVEFHPFGEFLA 65
Query: 2890 SCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFSLTTHQL 2949
S ++ VWD R + + H I + +P G D +KV+ LT +L
Sbjct: 66 SGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKL 125
Query: 2950 LYTF 2953
L+ F
Sbjct: 126 LHEF 129
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 WD-40
repeats (PF0400); identical to WD-40 repeat protein MSI2
(SP:O22468) [Arabidopsis thaliana] WD-40 repeats
(PF0400);
Length = 415
Score = 50.4 bits (115), Expect = 2e-05
Identities = 27/103 (26%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 2847 SESKNVAIWD-TLMPIKKAL--VVSWTCHEGGAACVAWAGGSGSLV-SCGRRGDVLVWDV 2902
S+ + + +WD + P K L + + HE A V+W + +L S G G +++WD
Sbjct: 188 SQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRLVIWDT 247
Query: 2903 RTRLVRHRLQAHHAQIKCLALAPLED-LYALGAADGDIKVFSL 2944
RT ++H+++ H ++ L+ P + + A ++D + +F L
Sbjct: 248 RTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDL 290
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 50.0 bits (114), Expect = 2e-05
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 9/108 (8%)
Query: 2884 GSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFS 2943
G+ C + G +LVWD RT + Q H+ + C+ +P L A GA D +KV++
Sbjct: 318 GNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWN 377
Query: 2944 LTTHQLLYTFAGEHARSSFFKHIGQGVTQIYIDNAGRLFSCGADGTMK 2991
+ + TF EH + H DN L S DGT++
Sbjct: 378 VMSGTCFITFT-EHTNAVTALH-------FMADNHS-LLSASLDGTVR 416
Score = 31.5 bits (68), Expect = 9.1
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 2882 AGGSGSLVSCGRRG--DVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDI 2939
A SG +V G ++ VW +T ++ L H A + L +PL L A + D +
Sbjct: 442 ADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTV 501
Query: 2940 KVFSL-TTHQLLYTFAGEH 2957
+++ + + + TF H
Sbjct: 502 RLWDVFASKGTVETFRHNH 520
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 50.0 bits (114), Expect = 2e-05
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 9/108 (8%)
Query: 2884 GSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFS 2943
G+ C + G +LVWD RT + Q H+ + C+ +P L A GA D +KV++
Sbjct: 358 GNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWN 417
Query: 2944 LTTHQLLYTFAGEHARSSFFKHIGQGVTQIYIDNAGRLFSCGADGTMK 2991
+ + TF EH + H DN L S DGT++
Sbjct: 418 VMSGTCFITFT-EHTNAVTALH-------FMADNHS-LLSASLDGTVR 456
Score = 31.5 bits (68), Expect = 9.1
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 2882 AGGSGSLVSCGRRG--DVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDI 2939
A SG +V G ++ VW +T ++ L H A + L +PL L A + D +
Sbjct: 482 ADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTV 541
Query: 2940 KVFSL-TTHQLLYTFAGEH 2957
+++ + + + TF H
Sbjct: 542 RLWDVFASKGTVETFRHNH 560
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 48.0 bits (109), Expect = 1e-04
Identities = 42/152 (27%), Positives = 64/152 (42%), Gaps = 15/152 (9%)
Query: 2839 LVATAGHSSESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVL 2898
L+ +AGHS + + +WD L +K + SW HEG +A G L + G VL
Sbjct: 74 LLFSAGHS---RQIRVWD-LETLK--CIRSWKGHEGPVMGMACHASGGLLATAGADRKVL 127
Query: 2899 VWDVRTRLVRHRLQAHHAQIKCLALAP--LEDLYALGAADGDIKVFSLTTHQLLYTFAGE 2956
VWDV H + H + + P +++ G+ D ++V+ L +
Sbjct: 128 VWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKN-----TEK 182
Query: 2957 HARSSFFKHIGQGVTQIYIDNAG-RLFSCGAD 2987
+ KH VT I + G LFS G D
Sbjct: 183 KCLAIMEKHF-SAVTSIALSEDGLTLFSAGRD 213
Score = 36.7 bits (81), Expect = 0.24
Identities = 47/248 (18%), Positives = 91/248 (36%), Gaps = 12/248 (4%)
Query: 2743 LTGGADGSVQLWEFGHPSCVWSPRAPGAFAKVTRIRFSDYG-NKFAASDADGNLAMWHLH 2801
+TG D +V+LW SC+ G + + F+ + F + D L +W L
Sbjct: 420 VTGSKDKTVRLWNATSKSCIGV--GTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLD 477
Query: 2802 PAPQYHEAQNQASRRPFFTHQCHSKGISDFVFLGSCSLVATAGHSSESKNVAIWDTLMPI 2861
+ E R H K I+ + SLV T SE + +IW +P
Sbjct: 478 GISEDSEEPINLKTRSVVA--AHDKDINSVAVARNDSLVCT---GSEDRTASIW--RLP- 529
Query: 2862 KKALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCL 2921
VV+ H+ V ++ +++ V +W + + H + +
Sbjct: 530 DLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRA 589
Query: 2922 ALAPLEDLYALGAADGDIKVFSLTTHQLLYTFAGEHARSSFFKHIGQGVTQIYIDNAGRL 2981
+ + ADG +K++++ T + + T+ +H + +G+ I +
Sbjct: 590 SFITDGTQFVSCGADGLLKLWNVNTSECIATY-DQHEDKVWALAVGKKTEMIATGGGDAV 648
Query: 2982 FSCGADGT 2989
+ D T
Sbjct: 649 INLWHDST 656
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 WD-40
repeats (PF00400); similiar to rab11 binding protein
(GI:4512103) [Bos taurus]
Length = 903
Score = 48.0 bits (109), Expect = 1e-04
Identities = 46/200 (23%), Positives = 86/200 (43%), Gaps = 8/200 (4%)
Query: 2774 VTRIRFSDYGNKFAASDADGNLAMWHLHPAPQYHEAQNQASRRPFFTHQCHSKGISDFVF 2833
V I+FS + A+ AD + +W + + N+ S P C S G V
Sbjct: 407 VWTIKFSQDAHYLASGGADRVIHVWEVQECELM--SMNEGSLTPIHPSLCDSSGNEITVV 464
Query: 2834 LGSCSLVATAG--HSSESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAGGSGSLVSC 2891
++G H+ V + +T+ V S H ++W+ S L+S
Sbjct: 465 EKKKKGKGSSGRRHNHIPDYVHVPETVFSFSDKPVCSLKGHLDAILDLSWSK-SQLLLSS 523
Query: 2892 GRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYAL-GAADGDIKVFSL-TTHQL 2949
V +WD+ T+ +L AH+ + C+ +P+++ Y L G+ D I+++S+ H +
Sbjct: 524 SMDKTVRLWDIETKTCL-KLFAHNDYVTCIQFSPVDENYFLSGSLDAKIRIWSIQDRHVV 582
Query: 2950 LYTFAGEHARSSFFKHIGQG 2969
++ E ++ + GQG
Sbjct: 583 EWSDLHEMVTAACYTPDGQG 602
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 46.8 bits (106), Expect = 2e-04
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
Query: 2888 LVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFSLTTH 2947
LV G GD+ +W+V T + + H+ + CL + + L G+ DG I+V+SL
Sbjct: 93 LVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLI-- 150
Query: 2948 QLLYTFAGEHARSSF---FKHIGQGVTQIYIDNAG---RLFSCGADGTMKVRKL 2995
+L F + + + F VT I ID G + S D T KV L
Sbjct: 151 RLFDDFQRQQGNTLYEHNFNEHTMSVTDIVIDYGGCNAVIISSSEDRTCKVWSL 204
Score = 37.9 bits (84), Expect = 0.10
Identities = 48/206 (23%), Positives = 80/206 (38%), Gaps = 19/206 (9%)
Query: 2745 GGADGSVQLWEFGHPSCVWSPRAPGAFAKVTRIRFSDYGNKFAASDADGNLAMWHLHPAP 2804
GG G + LWE + + G + VT + FS + + DG++ +W L
Sbjct: 96 GGISGDIYLWEVATGKLL--KKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSL--IR 151
Query: 2805 QYHEAQNQASRRPFFTHQC--HSKGISDFVF-LGSCSLVATAGHSSESKNVAIWD----- 2856
+ + Q Q + H H+ ++D V G C+ V + SSE + +W
Sbjct: 152 LFDDFQRQQG-NTLYEHNFNEHTMSVTDIVIDYGGCNAVIIS--SSEDRTCKVWSLSRGK 208
Query: 2857 TLMPIKKALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHA 2916
L I V++ + G CV +AG S + G + + V +
Sbjct: 209 LLKNIIFPSVINALALDPG-GCVFYAGARDSKIYIGAINATSEYGTQ---VLGSVSEKGK 264
Query: 2917 QIKCLALAPLEDLYALGAADGDIKVF 2942
I CLA +L G+ DG + V+
Sbjct: 265 AITCLAYCADGNLLISGSEDGVVCVW 290
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 46.4 bits (105), Expect = 3e-04
Identities = 31/127 (24%), Positives = 57/127 (44%), Gaps = 1/127 (0%)
Query: 2824 HSKGISDFVFLGSCSLVATAGHSSESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAG 2883
H++ +S F L+A+A + I PI + V +T HE G + VA++
Sbjct: 23 HNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEP-VQEFTGHENGISDVAFSS 81
Query: 2884 GSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFS 2943
+ +VS + +WDV T + L H C+ P ++ G+ D ++++
Sbjct: 82 DARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWD 141
Query: 2944 LTTHQLL 2950
+TT + L
Sbjct: 142 VTTGKCL 148
Score = 44.8 bits (101), Expect = 0.001
Identities = 52/221 (23%), Positives = 87/221 (39%), Gaps = 16/221 (7%)
Query: 2774 VTRIRFSDYGNKFAASDADGNLAMWHLHPAPQYHEAQNQASRRPFFTHQCHSKGISDFVF 2833
V+ ++FS G A++ AD + + ++ N P H GISD F
Sbjct: 27 VSSVKFSSDGRLLASASADKTIRTYTINTI-------NDPIAEPVQEFTGHENGISDVAF 79
Query: 2834 LGSCSLVATAGHSSESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAGGSGSLVSCGR 2893
+ +A S+ K + +WD +L+ + H A CV + S +VS
Sbjct: 80 SSDARFIVSA---SDDKTLKLWDVETG---SLIKTLIGHTNYAFCVNFNPQSNMIVSGSF 133
Query: 2894 RGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVF-SLTTHQLLYT 2952
V +WDV T L AH + + L + DG +++ S T H +
Sbjct: 134 DETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTL 193
Query: 2953 FAGEHARSSF--FKHIGQGVTQIYIDNAGRLFSCGADGTMK 2991
E+ SF F G+ + +DN RL++ + +K
Sbjct: 194 IDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLK 234
Score = 33.1 bits (72), Expect = 3.0
Identities = 17/79 (21%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 2868 SWTCHEGGAACV--AWAGGSGSLVSCGRRGD-VLVWDVRTRLVRHRLQAHHAQIKCLALA 2924
++T H C+ A++ +G + G + V +W++ ++ + +L+ H + +A
Sbjct: 235 TYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACH 294
Query: 2925 PLEDLYALGAADGDIKVFS 2943
P E+L A G+ D +++++
Sbjct: 295 PTENLIASGSLDKTVRIWT 313
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein /
activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very similar
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; similar to WD-40 repeat auxin-dependent
protein ARCA (SP:O24456) [Arabidopsis thaliana];
Length = 326
Score = 45.6 bits (103), Expect = 5e-04
Identities = 55/227 (24%), Positives = 94/227 (41%), Gaps = 22/227 (9%)
Query: 2743 LTGGADGSVQLWEFGHPSC---VWSPRAPGAFAKVTRIRFSDYGNKFAASDADGNLAMWH 2799
+T D S+ LW+ V R G V + S G + DG L +W
Sbjct: 32 VTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWD 91
Query: 2800 LHPAPQYHEAQNQASRRPFFTHQCHSKGISDFVFLGSCSLVATAGHSSESKNVAIWDTLM 2859
L A +++RR F H+K + F + +A S + + +W+TL
Sbjct: 92 L--------ATGESTRR--FVG--HTKDVLSVAFSTDNRQIVSA---SRDRTIKLWNTLG 136
Query: 2860 PIKKALVVSWTCHEGGAACVAWAGGS--GSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQ 2917
K + + H+ +CV ++ + ++VS V VW+++ +R+ L H
Sbjct: 137 ECKYTISEA-DGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGY 195
Query: 2918 IKCLALAPLEDLYALGAADGDIKVFSLTTHQLLYTF-AGEHARSSFF 2963
+ +A++P L A G DG I ++ L + LY+ AG S F
Sbjct: 196 LNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCF 242
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein /
activated protein kinase C receptor (RACK1) identical to
guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 44.8 bits (101), Expect = 0.001
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 22/227 (9%)
Query: 2743 LTGGADGSVQLWEFGHPSC---VWSPRAPGAFAKVTRIRFSDYGNKFAASDADGNLAMWH 2799
+T D S+ LW+ V R G V + S G + DG L +W
Sbjct: 32 VTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWD 91
Query: 2800 LHPAPQYHEAQNQASRRPFFTHQCHSKGISDFVFLGSCSLVATAGHSSESKNVAIWDTLM 2859
L A + +RR F H+K + F + +A S + + +W+TL
Sbjct: 92 L--------ATGETTRR--FVG--HTKDVLSVAFSTDNRQIVSA---SRDRTIKLWNTLG 136
Query: 2860 PIKKALVVSWTCHEGGAACVAWAGGS--GSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQ 2917
K + H+ +CV ++ + ++VS V VW+++ +R+ L H
Sbjct: 137 ECKYT-ISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGY 195
Query: 2918 IKCLALAPLEDLYALGAADGDIKVFSLTTHQLLYTF-AGEHARSSFF 2963
+ +A++P L A G DG I ++ L + LY+ AG S F
Sbjct: 196 LNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCF 242
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 44.4 bits (100), Expect = 0.001
Identities = 46/202 (22%), Positives = 79/202 (39%), Gaps = 18/202 (8%)
Query: 2769 GAFAKVTRIRFSDYGNKFAASDADGNLAMWHLHPAPQYHEAQNQASRRPFFTHQCHSKGI 2828
G A ++ ++FS+ GN A++ D + +W A N + ++ HS GI
Sbjct: 41 GHTAAISCVKFSNDGNLLASASVDKTMILW---------SATNYSL---IHRYEGHSSGI 88
Query: 2829 SDFVFLGSCSLVATAGHSSESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAGGSGSL 2888
SD + +A S+ + IWD P + V+ H CV + S +
Sbjct: 89 SDLAWSSDSHYTCSA---SDDCTLRIWDARSPYECLKVLRG--HTNFVFCVNFNPPSNLI 143
Query: 2889 VSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFSLTTHQ 2948
VS + +W+V+T ++AH I + L + DG K++
Sbjct: 144 VSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGT 203
Query: 2949 LLYTFAGEHARS-SFFKHIGQG 2969
L T + + + SF K G
Sbjct: 204 CLKTLIDDKSPAVSFAKFSPNG 225
Score = 35.1 bits (77), Expect = 0.74
Identities = 41/199 (20%), Positives = 86/199 (43%), Gaps = 24/199 (12%)
Query: 2735 VHYNMYADL--TGGADGSVQLWEFGHPSCVWSPRAPGAFAKVTRIRFSDYGNKFAASDAD 2792
V++N ++L +G D ++++WE CV +A ++ + F+ G+ ++ D
Sbjct: 134 VNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSM--PISSVHFNRDGSLIVSASHD 191
Query: 2793 GNLAMWHLHPAPQYHEAQNQASRRPFFTHQCHSKGISDFVFLGSCSLVATAGHSSESKNV 2852
G+ +W +A+ + + + + F G LVAT + + N
Sbjct: 192 GSCKIW---------DAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNY 242
Query: 2853 AIWDTLMPIKKALVVSWTCHEGGAACV--AWAGGSGSLVSCGRRGD-VLVWDVRTRLVRH 2909
A K L V +T H C+ A++ +G + G + V +WD++ R +
Sbjct: 243 ATG-------KFLKV-YTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQ 294
Query: 2910 RLQAHHAQIKCLALAPLED 2928
RL+ H + ++ P+++
Sbjct: 295 RLEGHTDAVISVSCHPVQN 313
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding protein
beta subunit-like protein (WD-40 repeat auxin-dependent
protein ARCA) {Arabidopsis thaliana}; contains 7 WD-40
repeats (PF00400)
Length = 327
Score = 43.2 bits (97), Expect = 0.003
Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 2846 SSESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAGGS--GSLVSCGRRGDVLVWDVR 2903
+S + + +W+TL K + H +CV ++ + ++VS V VW++
Sbjct: 123 ASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLS 182
Query: 2904 TRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFSLTTHQLLYT 2952
+R L H + +A++P L A G DG + ++ L + LY+
Sbjct: 183 NCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYS 231
Score = 37.1 bits (82), Expect = 0.18
Identities = 46/208 (22%), Positives = 87/208 (41%), Gaps = 17/208 (8%)
Query: 2743 LTGGADGSVQLWEFGHPSCVWSPRAPGAFAKVTRIRFSDYGNKFAASDADGNLAMWHLHP 2802
L+G DG ++LW+ + V + R G V + FS + ++ D + +W+
Sbjct: 79 LSGSWDGELRLWDLA--AGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLG 136
Query: 2803 APQYHEAQNQASRRPFFTHQCHSKGISDFVFLGSCSLVATAGHSSESKNVAIWDTLMPIK 2862
+Y ++ R + + C V +L T +S K V +W+ L K
Sbjct: 137 ECKYTISEGGEGHRDWVS--C--------VRFSPNTLQPTIVSASWDKTVKVWN-LSNCK 185
Query: 2863 KALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLA 2922
++ H G + VA + S G+ G VL+WD+ + L+A ++ I L
Sbjct: 186 LRSTLAG--HTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA-NSVIHALC 242
Query: 2923 LAPLEDLYALGAADGDIKVFSLTTHQLL 2950
+P + A + IK++ L + ++
Sbjct: 243 FSP-NRYWLCAATEHGIKIWDLESKSIV 269
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein 3
(SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 42.7 bits (96), Expect = 0.004
Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 5/123 (4%)
Query: 2836 SCSLVATAGHSSESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAGGSGSLVSCGRRG 2895
S S + G++ S + IWDT K V++ H+G + + L S +
Sbjct: 74 SASSLVAVGYADGS--IRIWDTE---KGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDN 128
Query: 2896 DVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFSLTTHQLLYTFAG 2955
D+++WDV RL+ H Q+ L + D ++V+ L T + +G
Sbjct: 129 DIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSG 188
Query: 2956 EHA 2958
H+
Sbjct: 189 HHS 191
Score = 35.9 bits (79), Expect = 0.42
Identities = 19/98 (19%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Query: 2847 SESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRL 2906
S+ ++ +WD + ++ + H + + G LVS + + VWD+ T+
Sbjct: 125 SKDNDIILWDV---VGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQH 181
Query: 2907 VRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFSL 2944
+ HH+++ + P E G+AD +++ +++
Sbjct: 182 CMQIVSGHHSEVWSVDTDPEERYVVTGSADQELRFYAV 219
Score = 34.7 bits (76), Expect = 0.98
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 21/114 (18%)
Query: 2745 GGADGSVQLWEFGHPSC-VWSPRAPGAFAKVTRIRFSDYGNKFAASDADGNLAMWHLHPA 2803
G ADGS+++W+ +C V GA VT +R++ G+ A+ D ++ +W +
Sbjct: 82 GYADGSIRIWDTEKGTCEVNFNSHKGA---VTALRYNKVGSMLASGSKDNDIILWDV--- 135
Query: 2804 PQYHEAQNQASRRPFFTHQCHSKGISDFVFL-GSCSLVATAGHSSESKNVAIWD 2856
F + H ++D VFL G LV+ SS+ K + +WD
Sbjct: 136 ---------VGESGLFRLRGHRDQVTDLVFLDGGKKLVS----SSKDKFLRVWD 176
Score = 32.3 bits (70), Expect = 5.2
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 2723 VGMASQTGRGASVHYNMYADL--TGGADGSVQLWEFGHPSCVWSPRAPGAFAKVTRIRFS 2780
V S G ++ YN + +G D + LW+ S ++ R G +VT + F
Sbjct: 100 VNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLF--RLRGHRDQVTDLVFL 157
Query: 2781 DYGNKFAASDADGNLAMWHL 2800
D G K +S D L +W L
Sbjct: 158 DGGKKLVSSSKDKFLRVWDL 177
Score = 31.5 bits (68), Expect = 9.1
Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 5/95 (5%)
Query: 2847 SESKNVAIWDT-LMPIKKALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTR 2905
S+ KN+ IW K++ H V + + L S G+ V WD
Sbjct: 601 SQDKNLKIWGLDFGDCHKSIFA----HGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKF 656
Query: 2906 LVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIK 2940
L+ HHA+I CLA++ D G+ D ++
Sbjct: 657 EHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMR 691
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 WD-40
repeats (PF0400); identical to WD-40 repeat protein MSI3
(SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 41.9 bits (94), Expect = 0.006
Identities = 23/103 (22%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 2847 SESKNVAIWDTLMPIKKALVVSWTCHEGGAAC---VAWAGGSGSLV-SCGRRGDVLVWDV 2902
S+ + + +WD ++ +EG + VAW + ++ S G +++WD+
Sbjct: 189 SQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDL 248
Query: 2903 RTRLVRHRLQAHHAQIKCLALAPLED-LYALGAADGDIKVFSL 2944
RT ++H+++ H +I L+ P + + A ++D + +F L
Sbjct: 249 RTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDL 291
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8)[Drosophila
melanogaster]
Length = 511
Score = 41.5 bits (93), Expect = 0.009
Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 14/152 (9%)
Query: 2846 SSESKNVAIWDTLM-PIKKALVV----SWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVW 2900
SS + +WD + +KK L S+ H+ C+ ++ S L S + G + +W
Sbjct: 231 SSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASGSQDGKIKIW 290
Query: 2901 DVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFSLTTHQLLYTFAGEHARS 2960
+RT + R AH + L+ + + D ++ L + +LL F G +
Sbjct: 291 RIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRG---HT 347
Query: 2961 SFFKHIGQGVTQIYIDNAGRLFSCGADGTMKV 2992
S+ H I+ + R+ + +D T+KV
Sbjct: 348 SYVNH------AIFTSDGSRIITASSDCTVKV 373
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 WD-40
repeats (PF00400); rab11 binding protein, Bos taurus,
EMBL:AF117897
Length = 905
Score = 41.1 bits (92), Expect = 0.011
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 2856 DTLMPIKKALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHH 2915
+T+ + + S+T H ++W+ S L+S V +WD+ T+ +L AH+
Sbjct: 502 ETVFSLSDKPICSFTGHLDDVLDLSWSR-SQLLLSSSMDKTVRLWDIETQSCL-KLFAHN 559
Query: 2916 AQIKCLALAPL-EDLYALGAADGDIKVFSLTTHQLL 2950
+ C+ PL ED + G+ D I++++++ Q++
Sbjct: 560 DYVTCVQFNPLDEDYFISGSLDAKIRIWNISNRQVV 595
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 WD-40
repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis thaliana,
EMBL:AF029262
Length = 411
Score = 40.3 bits (90), Expect = 0.020
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 2861 IKKALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVR-------TRLVRHRLQA 2913
I+ ++V ++ H + W+ L S G V +WD R TR HR +
Sbjct: 206 IRSSIVETYLGHTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEE 265
Query: 2914 HHAQIKCLALAPLE-DLYALGAADGDIKVFSLTTH 2947
H A ++ LA P + L A G GD K+ TH
Sbjct: 266 HTAAVRALAWCPFQASLLATGGGVGDGKIKFWNTH 300
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regulator
1 (PRL1) identical to PP1/PP2A phosphatases pleiotropic
regulator PRL1 (SP:Q42384) [Arabidopsis thaliana], PRL1
[Arabidopsis thaliana] GI:577733; contains Pfam PF00400:
WD domain, G-beta repeat (7 copies)
Length = 486
Score = 40.3 bits (90), Expect = 0.020
Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 3/109 (2%)
Query: 2847 SESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRL 2906
S + + IWD + K ++ T H +A + + S G V WD+
Sbjct: 195 SADRTIKIWDVATGVLK---LTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNK 251
Query: 2907 VRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFSLTTHQLLYTFAG 2955
V H + + CLAL P D+ G D +V+ + T ++ +G
Sbjct: 252 VIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSG 300
Score = 39.1 bits (87), Expect = 0.045
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 4/115 (3%)
Query: 2846 SSESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTR 2905
+ + K V WD + ++ S+ H G C+A L++ GR VWD+RT+
Sbjct: 236 AGDDKQVKCWDLE---QNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTK 292
Query: 2906 LVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFSLTTHQLLYTFAGEHARS 2960
+ L H + + P + G+ D IK + L + + T H +S
Sbjct: 293 MQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLT-HHKKS 346
Score = 35.5 bits (78), Expect = 0.56
Identities = 44/202 (21%), Positives = 80/202 (39%), Gaps = 23/202 (11%)
Query: 2744 TGGADGSVQLWEFGHPSCVWSPRAPGAFAKVTRIRFSD-YGNKFAASDADGNLAMWHLHP 2802
TG AD ++++W+ + V G +V + S+ + F+A D D + W L
Sbjct: 193 TGSADRTIKIWDVA--TGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGD-DKQVKCWDLE- 248
Query: 2803 APQYHEAQNQASRRPFFTHQCHSKGISDFVFLGSCSLVATAGHSSESKNVAIWDTLMPIK 2862
QN+ R ++ H G+ + ++ T G S + +WD
Sbjct: 249 -------QNKVIR----SYHGHLSGVYCLALHPTLDVLLTGGRDSVCR---VWDIRT--- 291
Query: 2863 KALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLA 2922
K + + + H+ V +V+ + WD+R L H ++ +
Sbjct: 292 KMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMT 351
Query: 2923 LAPLEDLYALGAADGDIKVFSL 2944
L P E+ +A +AD + K FSL
Sbjct: 352 LHPKENAFASASAD-NTKKFSL 372
Score = 31.9 bits (69), Expect = 6.9
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 2969 GVTQIYIDNAG-RLFSCGADGTMKVRKLPERDTPVHHP 3005
G+ DN G RL +C AD T+K+ K E TP HP
Sbjct: 437 GIYAACYDNTGSRLVTCEADKTIKMWKEDENATPETHP 474
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 WD-40
repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 39.5 bits (88), Expect = 0.034
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 8/95 (8%)
Query: 2861 IKKALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVR-------TRLVRHRLQA 2913
I+ ++V ++ H + W+ L S G V +WD R TR HR +
Sbjct: 237 IRSSIVGTYLGHTEEVCGLKWSESGKKLASGGNYNVVHIWDHRSVASSKPTRQWLHRFEE 296
Query: 2914 HHAQIKCLALAPLE-DLYALGAADGDIKVFSLTTH 2947
H A ++ LA P + L A G GD K+ TH
Sbjct: 297 HTAAVRALAWCPFQATLLATGGGVGDGKIKFWNTH 331
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 WD-40
repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 39.5 bits (88), Expect = 0.034
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 7/94 (7%)
Query: 2861 IKKALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWD------VRTRLVRHRLQAH 2914
I+ +V ++ H + W+G L S G V +WD T HRL+ H
Sbjct: 254 IRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEH 313
Query: 2915 HAQIKCLALAPLE-DLYALGAADGDIKVFSLTTH 2947
+ +K LA P + +L A G GD + TH
Sbjct: 314 TSAVKALAWCPFQANLLATGGGGGDRTIKFWNTH 347
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 WD-40
repeats (PF00400); WD-repeat protein -Daucus carota,
PID:g2253631
Length = 447
Score = 39.5 bits (88), Expect = 0.034
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 7/94 (7%)
Query: 2861 IKKALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWD------VRTRLVRHRLQAH 2914
I+ +V ++ H + W+G L S G V +WD T HRL+ H
Sbjct: 244 IRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEH 303
Query: 2915 HAQIKCLALAPLE-DLYALGAADGDIKVFSLTTH 2947
+ +K LA P + +L A G GD + TH
Sbjct: 304 TSAVKALAWCPFQANLLATGGGGGDRTIKFWNTH 337
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regulator
2 (PRL2) identical to SP|Q39190 PP1/PP2A phosphatases
pleiotropic regulator PRL2 {Arabidopsis thaliana},
GB:Q39190 from [Arabidopsis thaliana]; contains Pfam
PF00400: WD domain, G-beta repeat (7 copies, 1 weak)
Length = 479
Score = 39.5 bits (88), Expect = 0.034
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 3/105 (2%)
Query: 2847 SESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRL 2906
S + + IWD + K ++ T H G +A + + S G V WD+
Sbjct: 189 SADRTIKIWDVATGVLK---LTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNK 245
Query: 2907 VRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFSLTTHQLLY 2951
V H + CLAL P D+ G D +V+ + T ++
Sbjct: 246 VIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIF 290
Score = 34.7 bits (76), Expect = 0.98
Identities = 44/202 (21%), Positives = 81/202 (40%), Gaps = 24/202 (11%)
Query: 2744 TGGADGSVQLWEFGHPSCVWSPRAPGAFAKVTRIRFSD-YGNKFAASDADGNLAMWHLHP 2802
TG AD ++++W+ + V G +V + S+ + F+A D D + W L
Sbjct: 187 TGSADRTIKIWDVA--TGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGD-DKQVKCWDLE- 242
Query: 2803 APQYHEAQNQASRRPFFTHQCHSKGISDFVFLGSCSLVATAGHSSESKNVAIWDTLMPIK 2862
QN+ R ++ H G+ + +V T G S + +WD I+
Sbjct: 243 -------QNKVIR----SYHGHLHGVYCLALHPTLDVVLTGGRDSVCR---VWD----IR 284
Query: 2863 KALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLA 2922
+ + H+ V +++ + WD+R + H ++ +A
Sbjct: 285 TKMQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMA 344
Query: 2923 LAPLEDLYALGAADGDIKVFSL 2944
L P E+ + +AD +IK FSL
Sbjct: 345 LHPKENDFVSASAD-NIKKFSL 365
Score = 33.1 bits (72), Expect = 3.0
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 11/82 (13%)
Query: 2911 LQAHHAQIKCLALAPLEDLYALGAADGDIKVFSLTTHQLLYTFAGEHARSSFFKHIGQGV 2970
LQ H ++ +A P + + G+AD IK++ + T L T G HIGQ V
Sbjct: 166 LQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTG---------HIGQ-V 215
Query: 2971 TQIYIDNAGR-LFSCGADGTMK 2991
+ + N +FS G D +K
Sbjct: 216 RGLAVSNRHTYMFSAGDDKQVK 237
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 39.1 bits (87), Expect = 0.045
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 5/126 (3%)
Query: 2825 SKGISDFVFLGSCSLVATAG-HSSESKNVAIWDTLMPIKKALVVSWTC---HEGGAACVA 2880
+KG S F+G S+V + H + + D I+ + + +C ++GG+ +
Sbjct: 724 NKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSINNGSCTRVYKGGSTQIR 783
Query: 2881 WAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIK 2940
+ G ++ V V DV T+ +RH LQ H I + P D A ++ +K
Sbjct: 784 FQPRVGKYLAASSANLVNVLDVETQAIRHSLQGHANPINSVCWDPSGDFLA-SVSEDMVK 842
Query: 2941 VFSLTT 2946
V++L T
Sbjct: 843 VWTLGT 848
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine Rich
Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 39.1 bits (87), Expect = 0.045
Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 4/125 (3%)
Query: 2824 HSKGISDFVFLGSCSLVATAGHSSESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAG 2883
H+ + F S + + A K + IWD + + HE G + W G
Sbjct: 283 HTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRFICE----HEEGVTSLTWIG 338
Query: 2884 GSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFS 2943
S L + G V +WD H H ++ ++++ D + D +VF
Sbjct: 339 TSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFE 398
Query: 2944 LTTHQ 2948
+ Q
Sbjct: 399 SSEFQ 403
Score = 34.3 bits (75), Expect = 1.3
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Query: 2866 VVSWTCHEGGAACVAWAGGSGSLVSCGRRGD-VLVWDVRTRLVRHRLQAHHAQIKCLALA 2924
V ++T H+G +A + +LV+ G D +W + L H + CLA +
Sbjct: 63 VHTFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFS 122
Query: 2925 PLEDLYALGAADGDIKVFSLTTHQLLYTFAGEHA 2958
L A G DG +++F ++ L G A
Sbjct: 123 YDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGA 156
Score = 31.9 bits (69), Expect = 6.9
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 2744 TGGADGSVQLWEFGHPSCVWSPRAPGAFAKVTRIRFSDYGNKFAASDADG 2793
TGG D LW+ G+ W+ PG V+ + FS G A+ DG
Sbjct: 88 TGGGDDKAFLWKIGNGD--WAAELPGHKDSVSCLAFSYDGQLLASGGLDG 135
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta repeat;
similar to Coatomer alpha subunit (Alpha-coat protein)
(Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621) [Homo sapiens]
Length = 1218
Score = 38.7 bits (86), Expect = 0.060
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Query: 2895 GDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFSLTTHQLLYTFA 2954
G + +WD R + R H ++ + + L+ G D IKV++ TH+ L+T
Sbjct: 31 GVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLL 90
Query: 2955 G--EHARSSFFKHIGQGVTQIYIDNAGRLFS 2983
G ++ R+ F H + D R+++
Sbjct: 91 GHLDYIRTVQFHHENPWIVSASDDQTIRIWN 121
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein, carrot,(gi:2253631)
PIR:T14352
Length = 428
Score = 38.3 bits (85), Expect = 0.079
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 7/94 (7%)
Query: 2861 IKKALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVR------TRLVRHRLQAH 2914
I+ +++ ++ H + W+ L S G V +WD TR HR + H
Sbjct: 224 IRSSIIGTYVGHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEH 283
Query: 2915 HAQIKCLALAPLE-DLYALGAADGDIKVFSLTTH 2947
A ++ LA P + L A G GD K+ TH
Sbjct: 284 TAAVRALAWCPFQASLLATGGGVGDGKINFWNTH 317
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 WD-40
repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 38.3 bits (85), Expect = 0.079
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 7/94 (7%)
Query: 2861 IKKALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWD------VRTRLVRHRLQAH 2914
I+ ++V ++ H + W+ S G V +WD +TR HR + H
Sbjct: 240 IRSSIVETYLGHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEH 299
Query: 2915 HAQIKCLALAPLE-DLYALGAADGDIKVFSLTTH 2947
A ++ LA P + L A G GD K+ TH
Sbjct: 300 TAAVRALAWCPFQASLLATGGGVGDGKIKFWNTH 333
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats (PF00400)
(1 weak); similar to (SP:O55029) Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]; similar to GI:298096 from [Homo sapiens]
Length = 926
Score = 38.3 bits (85), Expect = 0.079
Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 5/110 (4%)
Query: 2842 TAGHSSESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAGGSGS--LVSCGRRGDVLV 2899
T +S + + IW+ P + H+ G CV + G L++ V
Sbjct: 157 TFASASLDRTIKIWNLGSPDPNFTL---DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKV 213
Query: 2900 WDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFSLTTHQL 2949
WD +T+ L+ H + + P + G+ DG ++++ TT++L
Sbjct: 214 WDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRL 263
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 37.5 bits (83), Expect = 0.14
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 2833 FLGSCSLVATAGHSSESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAGGSGSLVSCG 2892
F S +ATA S IW L K L + H+ + V+W+ L++CG
Sbjct: 232 FSNSGKYLATA---SSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDTKLLTCG 288
Query: 2893 RRGDVLVWDVRTRLVRH 2909
+ +WDV T ++RH
Sbjct: 289 NAEVLKLWDVDTGVLRH 305
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of Pol
II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 37.5 bits (83), Expect = 0.14
Identities = 27/119 (22%), Positives = 53/119 (44%), Gaps = 6/119 (5%)
Query: 2828 ISDFVFLGSCSLVATAGHSSESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAGGSGS 2887
+SD + +C+ +AT S K V +WD + + H +A +
Sbjct: 502 LSDVDWHPNCNYIATG---SSDKTVRLWDVQTGECVRIFIG---HRSMVLSLAMSPDGRY 555
Query: 2888 LVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFSLTT 2946
+ S G +++WD+ T L H++ + L+ + L A G+AD +K++ +T+
Sbjct: 556 MASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTS 614
Score = 34.7 bits (76), Expect = 0.98
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 2736 HYNMYADLTGGADGSVQLWEFGHPSCVWSPRAPGAFAKVTRIRFSDYGNKFAASDADGNL 2795
H N TG +D +V+LW+ CV G + V + S G A+ D DG +
Sbjct: 508 HPNCNYIATGSSDKTVRLWDVQTGECVRI--FIGHRSMVLSLAMSPDGRYMASGDEDGTI 565
Query: 2796 AMWHLHPA 2803
MW L A
Sbjct: 566 MMWDLSTA 573
Score = 33.1 bits (72), Expect = 3.0
Identities = 22/96 (22%), Positives = 40/96 (41%)
Query: 2874 GGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALG 2933
G + V W + + V +WDV+T H + + LA++P A G
Sbjct: 500 GHLSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASG 559
Query: 2934 AADGDIKVFSLTTHQLLYTFAGEHARSSFFKHIGQG 2969
DG I ++ L+T + + G ++ + G+G
Sbjct: 560 DEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEG 595
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 37.5 bits (83), Expect = 0.14
Identities = 29/127 (22%), Positives = 60/127 (47%), Gaps = 9/127 (7%)
Query: 2872 HEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQ-AHHAQIKCLALAP--LED 2928
H+G +AW L+S + +W+ +R + H + H A I C P ++
Sbjct: 49 HQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPETSDE 108
Query: 2929 LYALGAADGDIKVFSLTTHQLLYTFAGEHA--RSSFFKHIGQGVTQIYID--NAGRLFSC 2984
L GA D ++++F+ T +L ++A S+ ++ + V ++ ++ N ++S
Sbjct: 109 LVVSGAGDAEVRLFN--TSRLSGRAEDDNAIIPSALYQCHTRRVKKLAVEPGNPNVVWSA 166
Query: 2985 GADGTMK 2991
DGT++
Sbjct: 167 SEDGTLR 173
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats (PF00400)
(1 weak); identical to coatomer protein complex, beta
prime (beta'-COP) protein {Arabidopsis thaliana}
(GI:9294445); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606) [Homo
sapiens]
Length = 918
Score = 37.5 bits (83), Expect = 0.14
Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 5/110 (4%)
Query: 2842 TAGHSSESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAGGSGS--LVSCGRRGDVLV 2899
T +S + + IW+ P + H+ G CV + G L++ V
Sbjct: 157 TFASASLDRTIKIWNLGSPDPNFTL---DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKV 213
Query: 2900 WDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFSLTTHQL 2949
WD +T+ L H + + P + G+ DG ++++ TT++L
Sbjct: 214 WDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRL 263
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats (PF00400)
(1 weak); identical to coatomer protein complex, beta
prime (beta'-COP) protein {Arabidopsis thaliana}
(GI:9294445); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606) [Homo
sapiens]
Length = 918
Score = 37.5 bits (83), Expect = 0.14
Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 5/110 (4%)
Query: 2842 TAGHSSESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAGGSGS--LVSCGRRGDVLV 2899
T +S + + IW+ P + H+ G CV + G L++ V
Sbjct: 157 TFASASLDRTIKIWNLGSPDPNFTL---DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKV 213
Query: 2900 WDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFSLTTHQL 2949
WD +T+ L H + + P + G+ DG ++++ TT++L
Sbjct: 214 WDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRL 263
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats (PF00400)
(1 weak); identical to coatomer protein complex, beta
prime (beta'-COP) protein {Arabidopsis thaliana}
(GI:9294445); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606) [Homo
sapiens]
Length = 909
Score = 37.5 bits (83), Expect = 0.14
Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 5/110 (4%)
Query: 2842 TAGHSSESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAGGSGS--LVSCGRRGDVLV 2899
T +S + + IW+ P + H+ G CV + G L++ V
Sbjct: 157 TFASASLDRTIKIWNLGSPDPNFTL---DAHQKGVNCVDYFTGGDKPYLITGSDDHTAKV 213
Query: 2900 WDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFSLTTHQL 2949
WD +T+ L H + + P + G+ DG ++++ TT++L
Sbjct: 214 WDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRL 263
>At2g20710.2 68415.m02432 pentatricopeptide (PPR) repeat-containing
protein low similarity to DNA-binding protein [Triticum
aestivum] GI:6958202; contains Pfam profile PF01535: PPR
repeat
Length = 395
Score = 37.5 bits (83), Expect = 0.14
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 1978 LLQQEPEEGITRLERRLYFQTAHGHFKAGCPALALEVLSKLPARVRDEKPRH 2029
L++ E ++G+ L+ R Y TA+G+ KAG ALE+L K V +K +H
Sbjct: 137 LMRCEADQGL-HLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKH 187
>At2g20710.1 68415.m02431 pentatricopeptide (PPR) repeat-containing
protein low similarity to DNA-binding protein [Triticum
aestivum] GI:6958202; contains Pfam profile PF01535: PPR
repeat
Length = 490
Score = 37.5 bits (83), Expect = 0.14
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 1978 LLQQEPEEGITRLERRLYFQTAHGHFKAGCPALALEVLSKLPARVRDEKPRH 2029
L++ E ++G+ L+ R Y TA+G+ KAG ALE+L K V +K +H
Sbjct: 232 LMRCEADQGL-HLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKH 282
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 37.5 bits (83), Expect = 0.14
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Query: 2861 IKKALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKC 2920
+++ W H +C++ A G L S V VW + ++AH +
Sbjct: 123 VRRCRTALWIKHSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNS 182
Query: 2921 LALAPLEDLYALGAADGDIKVF 2942
+ A E L G+ADG +KV+
Sbjct: 183 VTTA--ESLVFTGSADGTVKVW 202
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 37.1 bits (82), Expect = 0.18
Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Query: 2846 SSESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTR 2905
+S K+V +W+ I V + H G V+W+ S L+S + + +W++RT+
Sbjct: 378 ASFDKSVRLWNG---ITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTK 434
Query: 2906 LVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVF 2942
++ L H ++ + +P + G D +K++
Sbjct: 435 KLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 32.7 bits (71), Expect = 3.9
Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 8/110 (7%)
Query: 2869 WTC--HEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRT-RLVRHRLQAHHAQIKCLALAP 2925
+TC H+ VAW+ LVS + G++ W+ + L L H I ++ P
Sbjct: 145 FTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEP 204
Query: 2926 LE-----DLYALGAADGDIKVFSLTTHQLLYTFAGEHARSSFFKHIGQGV 2970
+ + + DGD +++ +T + + +G + K G G+
Sbjct: 205 VHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDGI 254
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 37.1 bits (82), Expect = 0.18
Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 7/122 (5%)
Query: 2824 HSKGISDFVFLGSCSLVATAGHSSESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAG 2883
H G VF + + T G + + V +WDT L+ S G +A
Sbjct: 230 HEGGCGSIVFEYNSGTLFTGG---QDRAVKMWDTN---SGTLIKSLYGSLGNILDMAVTH 283
Query: 2884 GSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAA-DGDIKVF 2942
+ S+++ ++ VWDV + VRH L H ++ + ++ + + AA D IK++
Sbjct: 284 DNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLW 343
Query: 2943 SL 2944
L
Sbjct: 344 DL 345
Score = 35.9 bits (79), Expect = 0.42
Identities = 41/179 (22%), Positives = 75/179 (41%), Gaps = 26/179 (14%)
Query: 2773 KVTRIRFSDYGNKFAASDA-DGNLAMWHLHPAPQYHEAQNQASRRPFFTHQCHSKGISDF 2831
KV + S + ++ S A D + +W LH + + FT C++
Sbjct: 317 KVCAVDVSKFSSRHVVSAAYDRTIKLWDLH--------KGYCTNTVLFTSNCNA------ 362
Query: 2832 VFLGSCSLVATAGHSSESKNVAIWDTLMPIKKALVVSWTC-HEGGAACVAWAGGSGSLVS 2890
+ L L +GH N+ +WD I+ ++S H V+ + +++
Sbjct: 363 ICLSIDGLTVFSGHMDG--NLRLWD----IQTGKLLSEVAGHSSAVTSVSLSRNGNRILT 416
Query: 2891 CGRRGDVLVWDVRTRLVRHRLQAHHAQIKC----LALAPLEDLYALGAADGDIKVFSLT 2945
GR V+D RT + L+A ++ ++P +D A G+ADG + V+SL+
Sbjct: 417 SGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSCISPDDDYVAAGSADGSVHVWSLS 475
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 37.1 bits (82), Expect = 0.18
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 2879 VAWAGGSGSLVSCGRR-GDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLED-LYALGAAD 2936
VAW+ +G ++CG G + V+DV + H+L+ H+ ++ L +P++ + G+ D
Sbjct: 164 VAWSP-NGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDD 222
Query: 2937 GDIKVFSLTTHQLLYTFAG 2955
G + + LL + +G
Sbjct: 223 GHVNMHDAEGKTLLGSMSG 241
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 37.1 bits (82), Expect = 0.18
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 2893 RRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFSLTTHQLLYT 2952
+ G + +W++ T+ + ++ + + + +P D+ A+G ADG I V ++ + + T
Sbjct: 159 QEGPLQLWNINTKKMLYQFKGWGSSVTSCVSSPALDVVAIGCADGKIHVHNIKLDEEIVT 218
Query: 2953 FAGEHA 2958
F EHA
Sbjct: 219 F--EHA 222
Score = 35.9 bits (79), Expect = 0.42
Identities = 27/113 (23%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Query: 2872 HEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYA 2931
H+G VA + ++S G GD+ VWD + R ++ + + +K + + L A
Sbjct: 473 HDGEVIGVACDSTNTLMISAGYHGDLKVWDFKKRELKSQWDVGCSLVK-IVYHRVNGLLA 531
Query: 2932 LGAADGDIKVFSLTTHQLLYTFAGEHARSS--FFKHIGQGVTQIYIDNAGRLF 2982
A D I+++ + T +++ F G R + F G+ V +D + R++
Sbjct: 532 TVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIW 584
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 37.1 bits (82), Expect = 0.18
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 2826 KGISDFVFLGSCSLVATAGHSSESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAGGS 2885
KG +D + + + V GHS + V +W P +A +V CH G + VA+
Sbjct: 239 KGRTDVMEVNPYNSVVGLGHSGGT--VTMWK---PTSQAPLVQMQCHPGPVSSVAFHPNG 293
Query: 2886 GSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQ 2917
+ + G+ + +WD+R + + HA+
Sbjct: 294 HLMATSGKERKIKIWDLRKFEEVQTIHSFHAK 325
Score = 31.5 bits (68), Expect = 9.1
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Query: 2887 SLVSCGRRGD-VLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFSLT 2945
S+V G G V +W ++ ++Q H + +A P L A + IK++ L
Sbjct: 252 SVVGLGHSGGTVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLR 311
Query: 2946 THQLLYTFAGEHARSSFFKHIG 2967
+ + T HA++ F G
Sbjct: 312 KFEEVQTIHSFHAKTLSFSQKG 333
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 37.1 bits (82), Expect = 0.18
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 2870 TCHEGGAACVAWAGGS-GSLV-SCGRRGDVLVWDVRTR---LVRHRLQAHHAQIKCLALA 2924
T H G VAWA GSL+ SC G +++W + H H + +A A
Sbjct: 53 TGHRGPVWQVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAWA 112
Query: 2925 PLEDLYAL--GAADGDIKVFS 2943
P E +L GA+DG+I VFS
Sbjct: 113 PHELGLSLACGASDGNISVFS 133
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 37.1 bits (82), Expect = 0.18
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Query: 2867 VSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPL 2926
V+ HEG A +AW G L + + WD R + H Q KC L+
Sbjct: 108 VTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDTRQQNPVHTQQLPD---KCYTLSVK 164
Query: 2927 EDLYALGAADGDIKVFSLTTHQ 2948
L +G AD ++ VF+L Q
Sbjct: 165 HPLMVVGTADRNLIVFNLQNPQ 186
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 37.1 bits (82), Expect = 0.18
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 4/101 (3%)
Query: 2852 VAIWDTLMPIKKALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRL 2911
V IWD + + L + H G ++ G +VS V+VWD +T + L
Sbjct: 879 VKIWDPSLRGSE-LRATLKGHTGTVRAIS--SDRGKIVSGSDDLSVIVWDKQTTQLLEEL 935
Query: 2912 QAHHAQIKCLALAPLEDLYALGAADGDIKVFSLTTHQLLYT 2952
+ H +Q+ C+ + E + A DG +K++ + T + T
Sbjct: 936 KGHDSQVSCVKMLSGERVLT-AAHDGTVKMWDVRTDMCVAT 975
Score = 35.1 bits (77), Expect = 0.74
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 8/106 (7%)
Query: 2840 VATAGHSSESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLV 2899
V TA H V +WD + A V C + + +G L + GR +
Sbjct: 953 VLTAAHDG---TVKMWDVRTDMCVATV--GRC-SSAILSLEYDDSTGILAAAGRDTVANI 1006
Query: 2900 WDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFSLT 2945
WD+R+ H+L+ H I+ + + +ED G+ D +V+S++
Sbjct: 1007 WDIRSGKQMHKLKGHTKWIRSIRM--VEDTLITGSDDWTARVWSVS 1050
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 36.7 bits (81), Expect = 0.24
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 2745 GGADGSVQLWEFGHPSCVWSPRAPGAFAKVTRIRFSDYGNKFAASDADGNLAMW 2798
G ADG +W+F R A +T + +S YG++ S AD +L +W
Sbjct: 41 GCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKYGHRLLVSAADKSLTLW 94
>At3g16320.1 68416.m02061 cell division cycle family protein / CDC
family protein similar to SP|P30260|CC27_HUMAN Protein
CDC27Hs (Cell division cycle protein 27 homolog) Homo
sapiens, C-terminus similar to C-term of cell division
control protein 27 SP:P38042 (Saccharomyces cerevisiae);
contains Pfam profile PF00515 TPR Domain
Length = 727
Score = 36.7 bits (81), Expect = 0.24
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 2386 PGTSQLLARTRRQSFDEVVVTTPPNKWPAESGAEDVDESGSETDDDDIFDTSNTKPEK 2443
P S ++ + R QS EV+ T PA + + V + GS DD++ + S + P++
Sbjct: 327 PSLSSMIGKCRIQSSKEVIPDTVTLNDPATTSGQSVSDIGSSVDDEEKSNPSESSPDR 384
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats (PF00400)
(1 weak); similar to Coatomer beta' subunit (Beta'-coat
protein) (Beta'-COP) (p102) (SP:P35606) [Homo sapiens];
similar to Coatomer beta' subunit (Beta'-coat protein)
(Beta'-COP) (p102) (SP:O55029) [Mus musculus]
Length = 920
Score = 36.7 bits (81), Expect = 0.24
Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 5/110 (4%)
Query: 2842 TAGHSSESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAGGSGS--LVSCGRRGDVLV 2899
T +S + + IW+ P + H G CV + G L++ V
Sbjct: 157 TFASASLDRTIKIWNLGSPDPNFTL---DAHLKGVNCVDYFTGGDKPYLITGSDDHTAKV 213
Query: 2900 WDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFSLTTHQL 2949
WD +T+ L+ H + ++ P + G+ DG ++++ TT++L
Sbjct: 214 WDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHATTYRL 263
>At5g01770.1 68418.m00096 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]
Length = 1354
Score = 36.3 bits (80), Expect = 0.32
Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 12/172 (6%)
Query: 2788 ASDADGNLAMWHLHPAPQYHEAQNQASRRPFFTHQCHSKGISDFVFLGSCSLVATAGHSS 2847
A+D + + +W+ A + N ++ C + D + L + V T +S
Sbjct: 1036 AADENERIRVWNYEEATLLNGFDNNDFPDKGISNLCLVNELDDSLLLVASCNVPTLSRAS 1095
Query: 2848 ESKNVAIW-DTLMPIKKALVVSWTCHEG---GA----ACVAWAGGSGSLVSCGRRGDVLV 2899
+ + IW D ++ LV ++ +G GA A V W SG L G ++V
Sbjct: 1096 FA--IRIWKDYATKGRQKLVTGFSSIQGQKPGASGLNAVVDWQQQSGYLYVSGESLSIMV 1153
Query: 2900 WDV-RTRLVRHRLQAHHAQIKCLALAPLE-DLYALGAADGDIKVFSLTTHQL 2949
WD+ + +LV+ + L+ + + A G ADG ++++ + T L
Sbjct: 1154 WDLDKEQLVKSMPFESGCSVTALSASQVHGSQLAAGFADGSVRLYDVRTPDL 1205
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1) /
transducin contains 7 WD-40 repeats (PF00400); identical
to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 36.3 bits (80), Expect = 0.32
Identities = 19/75 (25%), Positives = 32/75 (42%)
Query: 2872 HEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYA 2931
H G + W +VS + G ++VW+ T H ++ A + A +P A
Sbjct: 64 HTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVA 123
Query: 2932 LGAADGDIKVFSLTT 2946
G D +FSL++
Sbjct: 124 CGGLDSVCSIFSLSS 138
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1) /
transducin contains 7 WD-40 repeats (PF00400); identical
to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 36.3 bits (80), Expect = 0.32
Identities = 19/75 (25%), Positives = 32/75 (42%)
Query: 2872 HEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYA 2931
H G + W +VS + G ++VW+ T H ++ A + A +P A
Sbjct: 64 HTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVA 123
Query: 2932 LGAADGDIKVFSLTT 2946
G D +FSL++
Sbjct: 124 CGGLDSVCSIFSLSS 138
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 36.3 bits (80), Expect = 0.32
Identities = 43/184 (23%), Positives = 69/184 (37%), Gaps = 21/184 (11%)
Query: 2774 VTRIRFSDYGNKFAASDADGNLAMWHLHPAPQYHEAQNQASRRPFFTHQCHSKGISDFVF 2833
V ++F+ G A+ D + +W +H + +N F + H I D +
Sbjct: 56 VYTMKFNPAGTLIASGSHDREIFLWRVHG-----DCKN------FMVLKGHKNAILDLHW 104
Query: 2834 LGSCSLVATAGHSSESKNVAIWD--TLMPIKKALVVSWTCHEGGAACVAWAGGSGSLVSC 2891
S + +A S K V WD T IKK S + +C G ++S
Sbjct: 105 TSDGSQIVSA---SPDKTVRAWDVETGKQIKKMAEHSSFVN----SCCPTRRGPPLIISG 157
Query: 2892 GRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFSLTTHQLLY 2951
G +WD+R R + QI ++ + D G D D+KV+ L +
Sbjct: 158 SDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATM 216
Query: 2952 TFAG 2955
T G
Sbjct: 217 TLEG 220
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 35.9 bits (79), Expect = 0.42
Identities = 15/58 (25%), Positives = 26/58 (44%)
Query: 2868 SWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAP 2925
++T H+G CV W L SC +W+++ H L+ H +I + +P
Sbjct: 443 TFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSP 500
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 35.9 bits (79), Expect = 0.42
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 4/110 (3%)
Query: 2835 GSCSLVATAGHSSESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAGGSG-SLVSCGR 2893
G S + AG S + +WD P A V ++ H + W S L+S
Sbjct: 322 GESSALIAAGGSDPI--LRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASY 379
Query: 2894 RGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFS 2943
G +++WD+RT + H+ ++ E + + G AD ++++ S
Sbjct: 380 DGKIMLWDLRTAWPLSVIDTHNDKVLSADWWKGESVVS-GGADSNLRISS 428
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 35.9 bits (79), Expect = 0.42
Identities = 21/84 (25%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
Query: 2862 KKALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCL 2921
+KA W H ++W G L++ + VWDV L H +K +
Sbjct: 117 EKARFRDWIAHYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSM 176
Query: 2922 ALAPL-EDLYALGAADGDIKVFSL 2944
P DL G+ DG ++ L
Sbjct: 177 CSHPTNSDLLVSGSRDGCFALWDL 200
Score = 34.3 bits (75), Expect = 1.3
Identities = 35/152 (23%), Positives = 63/152 (41%), Gaps = 14/152 (9%)
Query: 2762 VWSPRAPGAFAKVTRIRFSDYGNKFAASDADGNLAMWHLHPAPQYHEAQNQAS--RRPFF 2819
+W+P +F K +R FA SD DG++++++ A +Q + + F
Sbjct: 68 IWTPPLAVSFCKTSR-----NSQLFAVSDEDGHVSLFNSSSKKFASSATHQENTEKARFR 122
Query: 2820 THQCHSKGISDFVFLGSCSLVATAGHSSESKNVAIWDTLMPIKKALVVSWTCHEGGAACV 2879
H I D ++ S + TA S + + +WD +++ H G +
Sbjct: 123 DWIAHYNAIFDISWIKGDSCLLTA---SGDQTIKVWDVEENKCTGVLIG---HTGTVKSM 176
Query: 2880 -AWAGGSGSLVSCGRRGDVLVWDVRTRLVRHR 2910
+ S LVS R G +WD+R + H+
Sbjct: 177 CSHPTNSDLLVSGSRDGCFALWDLRCKSSSHK 208
>At3g20740.1 68416.m02624 fertilization-independent endosperm protein
(FIE) contains 6 WD-40 repeats (PF00400); identical to
fertilization-independent endosperm protein (GI:4567095)
[Arabidopsis thaliana]
Length = 369
Score = 35.9 bits (79), Expect = 0.42
Identities = 34/132 (25%), Positives = 55/132 (41%), Gaps = 15/132 (11%)
Query: 2867 VSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPL 2926
VSW C G VA AGG +G + V DV + + L H + + PL
Sbjct: 89 VSWACGVNGNPYVA-AGGV--------KGIIRVIDVNSETIHKSLVGHGDSVNEIRTQPL 139
Query: 2927 EDLYALGAA-DGDIKVFSLTTHQLLYTFAGEHARSSFFKHIGQGVTQIYIDNAGRLFSCG 2985
+ + A+ D ++++++ T + FAG + + IY R SCG
Sbjct: 140 KPQLVITASKDESVRLWNVETGICILIFAGAGGHRYEVLSVDFHPSDIY-----RFASCG 194
Query: 2986 ADGTMKVRKLPE 2997
D T+K+ + E
Sbjct: 195 MDTTIKIWSMKE 206
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 35.9 bits (79), Expect = 0.42
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 2714 LNPNAPQVPVGMASQTGRGASVHYNMYAD--LTGGADGSVQLWEFGHPSCVWSPRAPGAF 2771
+N N+PQ + S T +V + A +G DG+V++W+ P C + +
Sbjct: 63 VNSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGC---QKEYESV 119
Query: 2772 AKVTRIRFSDYGNKFAASDADGNLAMWHL 2800
A V + + + D +GN+ +W L
Sbjct: 120 AAVNTVVLHPNQTELISGDQNGNIRVWDL 148
Score = 35.1 bits (77), Expect = 0.74
Identities = 39/156 (25%), Positives = 65/156 (41%), Gaps = 15/156 (9%)
Query: 2848 ESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDV---RT 2904
++ N+ +WD +V + V W G +V+ RG VW + +
Sbjct: 139 QNGNIRVWDLRANSCSCELVPEVDTAVRSLTVMWDGTM--VVAANNRGTCYVWRLLRGKQ 196
Query: 2905 RLVR----HRLQAHHAQI-KCLALAPLEDLYALGAADGDIKVFSLTTHQLLYTFAGEHAR 2959
+ H+LQAH+ I KCL L+P A ++D +K++++ +L G H R
Sbjct: 197 TMTEFEPLHKLQAHNGHILKCL-LSPANKYLATASSDKTVKIWNVDGFKLEKVLTG-HQR 254
Query: 2960 ---SSFFKHIGQGVTQIYIDNAGRLFSCGADGTMKV 2992
F G+ + D RL+S A +KV
Sbjct: 255 WVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKV 290
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta repeat;
similar to Coatomer alpha subunit (Alpha-coat protein)
(Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621) [Homo sapiens]
Length = 1216
Score = 35.9 bits (79), Expect = 0.42
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 2895 GDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFSLTTHQLLYTFA 2954
G + +WD R + R H ++ + + L+ G D IKV++ H+ L+T
Sbjct: 31 GVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLL 90
Query: 2955 G--EHARSSFFKH 2965
G ++ R+ F H
Sbjct: 91 GHLDYIRTVQFHH 103
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 35.5 bits (78), Expect = 0.56
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 13/118 (11%)
Query: 2872 HEGGAACVAWAGGSGSL--VSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDL 2929
H GG ++++ + L ++CG + VWD T + RH + H A + + E++
Sbjct: 461 HVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENI 520
Query: 2930 YAL--GAADGDIKVFSLTTHQLLYTFAGEHARSSFFKHIGQGVTQIYIDNAGRLFSCG 2985
+ A DG IK + LY G +R + T Y + RLFSCG
Sbjct: 521 QFIFSTALDGKIKAW-------LYDNMG--SRVDYDAPGRWCTTMAYSADGTRLFSCG 569
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 35.5 bits (78), Expect = 0.56
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 13/118 (11%)
Query: 2872 HEGGAACVAWAGGSGSL--VSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDL 2929
H GG ++++ + L ++CG + VWD T + RH + H A + + E++
Sbjct: 461 HVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENI 520
Query: 2930 YAL--GAADGDIKVFSLTTHQLLYTFAGEHARSSFFKHIGQGVTQIYIDNAGRLFSCG 2985
+ A DG IK + LY G +R + T Y + RLFSCG
Sbjct: 521 QFIFSTALDGKIKAW-------LYDNMG--SRVDYDAPGRWCTTMAYSADGTRLFSCG 569
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 35.1 bits (77), Expect = 0.74
Identities = 23/100 (23%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 2872 HEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYA 2931
H G ++W+ G L+S V +W V + R+ +H + + C+A P++D Y
Sbjct: 362 HTGEILDLSWSE-KGFLLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFNPVDDNYF 420
Query: 2932 L-GAADGDIKVFSLTTHQLL-YTFAGEHARSSFFKHIGQG 2969
+ G+ DG ++++ ++ +++ YT + + ++ G+G
Sbjct: 421 ISGSIDGKVRIWDVSQFRVVDYTDIRQIVTALCYRPDGKG 460
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 35.1 bits (77), Expect = 0.74
Identities = 37/146 (25%), Positives = 59/146 (40%), Gaps = 10/146 (6%)
Query: 2820 THQCHSKGISDFVFLGSCSLVATAGHSSESKNVAIWDTLMPIKKALVVSWTCHEGGAACV 2879
T + H ++D G +LV+ S V WD L + H C+
Sbjct: 79 TFESHVDWVNDAALAGESTLVSC----SSDTTVKTWDGLSD--GVCTRTLRQHSDYVTCL 132
Query: 2880 AWAGGSGSLV-SCGRRGDVLVWDVRTRL--VRHRLQAHHAQIKCLALAPLEDLYALGAAD 2936
A A + ++V S G G+V +WD+ L V A+ A P+ L +G+++
Sbjct: 133 AVAAKNNNVVASGGLGGEVFIWDIEAALSPVTKPNDANEDSSSNGANGPVTSLRTVGSSN 192
Query: 2937 GDIKVFSLTTHQLLYTFAGEHARSSF 2962
+I V S +H T A H S +
Sbjct: 193 -NISVQSSPSHGYTPTIAKGHKESVY 217
Score = 34.7 bits (76), Expect = 0.98
Identities = 22/83 (26%), Positives = 37/83 (44%)
Query: 2872 HEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYA 2931
H+ +A LVS G + VWD RT +L+ H ++ L L
Sbjct: 212 HKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCL 271
Query: 2932 LGAADGDIKVFSLTTHQLLYTFA 2954
G++D I+++ L + L+T+A
Sbjct: 272 SGSSDSMIRLWDLGQQRCLHTYA 294
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 35.1 bits (77), Expect = 0.74
Identities = 37/146 (25%), Positives = 59/146 (40%), Gaps = 10/146 (6%)
Query: 2820 THQCHSKGISDFVFLGSCSLVATAGHSSESKNVAIWDTLMPIKKALVVSWTCHEGGAACV 2879
T + H ++D G +LV+ S V WD L + H C+
Sbjct: 79 TFESHVDWVNDAALAGESTLVSC----SSDTTVKTWDGLSD--GVCTRTLRQHSDYVTCL 132
Query: 2880 AWAGGSGSLV-SCGRRGDVLVWDVRTRL--VRHRLQAHHAQIKCLALAPLEDLYALGAAD 2936
A A + ++V S G G+V +WD+ L V A+ A P+ L +G+++
Sbjct: 133 AVAAKNNNVVASGGLGGEVFIWDIEAALSPVTKPNDANEDSSSNGANGPVTSLRTVGSSN 192
Query: 2937 GDIKVFSLTTHQLLYTFAGEHARSSF 2962
+I V S +H T A H S +
Sbjct: 193 -NISVQSSPSHGYTPTIAKGHKESVY 217
Score = 34.7 bits (76), Expect = 0.98
Identities = 22/83 (26%), Positives = 37/83 (44%)
Query: 2872 HEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYA 2931
H+ +A LVS G + VWD RT +L+ H ++ L L
Sbjct: 212 HKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCL 271
Query: 2932 LGAADGDIKVFSLTTHQLLYTFA 2954
G++D I+++ L + L+T+A
Sbjct: 272 SGSSDSMIRLWDLGQQRCLHTYA 294
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)]; similar
to WDR1 protein GB:AAD05042 [Gallus gallus] (Genomics 56
(1), 59-69 (1999)); contains 11 WD-40 repeats (PF00400)
Length = 609
Score = 34.7 bits (76), Expect = 0.98
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 2872 HEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHH-AQIKCLALAPLEDLY 2930
H G + + ++ S + +VWD +R ++ + +H A+I CLA +P +
Sbjct: 490 HRGAISVIRYSPDLSMFASADLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPNSTMV 549
Query: 2931 ALGAADGDIKVFSL 2944
A G+ D + V+ +
Sbjct: 550 ATGSLDTCVIVYEV 563
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 34.3 bits (75), Expect = 1.3
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 2720 QVPVGMASQTG--RGASVHYNMY----ADLTGGADGSVQLWEFGHPSCVWSPRAPGAFAK 2773
QVPV + G R SV Y +Y +G DG+VQ+W+ + + PG A
Sbjct: 155 QVPVSERDEHGGRRIWSVDYTLYNGSLIGASGSDDGTVQMWDPRNGGTLEETVRPGGGAA 214
Query: 2774 VTRIRFSDY-GNKFAASDADGNLAMWHL 2800
+ + F + G+ A AD N ++ +
Sbjct: 215 ICSVEFDPFGGSSIAVGCADRNAYVYDI 242
>At4g24330.1 68417.m03492 expressed protein hypothetical protein -
Caenorhabditis elegans,PID:e1350884
Length = 478
Score = 34.3 bits (75), Expect = 1.3
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Query: 2088 WDDDDKESEASGASTPPLEMKMDQNDDEGPAVPGTSDNKEAEETPTVDIMAQQLKF---V 2144
WD+D E E E + +D PA P T D + A ETP DI + + +
Sbjct: 98 WDED--EFEGLPEDEKSTESPVFSDDASSPADPQTPDLESASETPDTDIPKKMQSYTVEI 155
Query: 2145 ACLKILMEELSTLATG 2160
C+ IL+ TG
Sbjct: 156 VCVSILIGYAINYFTG 171
>At3g08850.1 68416.m01029 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies, 1 weak)
Length = 1344
Score = 34.3 bits (75), Expect = 1.3
Identities = 40/154 (25%), Positives = 64/154 (41%), Gaps = 15/154 (9%)
Query: 2818 FFTHQCHSKGISDFVFLGSC--SLVATAGHSSESKNVAIWDTLMPI-KKALVVSWTC--- 2871
F H KGIS + SL+ A S +V IW K+ LV ++
Sbjct: 1065 FDNHDFPDKGISKLCLINELDDSLLLVA---SCDGSVRIWKNYATKGKQKLVTGFSSIQG 1121
Query: 2872 HEGGA----ACVAWAGGSGSLVSCGRRGDVLVWDV-RTRLVRHRLQAHHAQIKCLALAPL 2926
H+ GA A V W SG L + G V +WD+ + +LVR + L+ + +
Sbjct: 1122 HKPGARDLNAVVDWQQQSGYLYASGETSTVTLWDLEKEQLVRSVPSESECGVTALSASQV 1181
Query: 2927 E-DLYALGAADGDIKVFSLTTHQLLYTFAGEHAR 2959
A G ADG ++++ + + + L H +
Sbjct: 1182 HGGQLAAGFADGSLRLYDVRSPEPLVCATRPHQK 1215
Score = 34.3 bits (75), Expect = 1.3
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 2888 LVSCGRRGDVLVWDVRT-RLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFSLTT 2946
+VS + GD+ D+RT R + AH + LA+ + A G+A IKVFSL
Sbjct: 1233 VVSASQAGDIQFLDLRTTRDTYLTIDAHRGSLTALAVHRHAPIIASGSAKQLIKVFSLQG 1292
Query: 2947 HQL 2949
QL
Sbjct: 1293 EQL 1295
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 34.3 bits (75), Expect = 1.3
Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 15/150 (10%)
Query: 2848 ESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDV---RT 2904
++ N+ +WD + +V + V W G +V+ RG VW R
Sbjct: 145 QNGNIRVWDLRADLCSCELVPEVGTPIRSLTVMWDGTM--VVAANDRGTCYVWRSLCERQ 202
Query: 2905 RLVR----HRLQAHHAQI-KCLALAPLEDLYALGAADGDIKVFSLTTHQLLYTFAGEHAR 2959
+ H+LQAH++ I KCL L+P A ++D +K+++L +L G H R
Sbjct: 203 TMTEFEPLHKLQAHNSHILKCL-LSPGNKYLATASSDKTVKIWNLDGFKLEKVLTG-HER 260
Query: 2960 ---SSFFKHIGQGVTQIYIDNAGRLFSCGA 2986
F G+ + D RL+S A
Sbjct: 261 WVWDCDFSMDGEYLVTASSDTTARLWSMRA 290
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 33.9 bits (74), Expect = 1.7
Identities = 22/117 (18%), Positives = 44/117 (37%), Gaps = 6/117 (5%)
Query: 2833 FLGSCSLVATAGHSSESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAGGSGSLVSCG 2892
F G + T G + + + +W+ P + L+ ++ H V + SCG
Sbjct: 26 FNGDGNYALTCG---KDRTIRLWN---PHRGILIKTYKSHGREVRDVHVTSDNAKFCSCG 79
Query: 2893 RRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFSLTTHQL 2949
V WDV T V + + H ++ + + D ++V+ +H +
Sbjct: 80 GDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRSHSV 136
Score = 31.5 bits (68), Expect = 9.1
Identities = 21/130 (16%), Positives = 53/130 (40%), Gaps = 4/130 (3%)
Query: 2857 TLMPIKKALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHA 2916
T +P K+A ++ HEG + G ++CG+ + +W+ ++ ++H
Sbjct: 4 TELPTKEAHILKG--HEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGR 61
Query: 2917 QIKCLALAPLEDLYALGAADGDIKVFSLTTHQLLYTFAGE--HARSSFFKHIGQGVTQIY 2974
+++ + + + D + + ++T +++ F G + F V
Sbjct: 62 EVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAG 121
Query: 2975 IDNAGRLFSC 2984
D + R++ C
Sbjct: 122 FDRSLRVWDC 131
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 WD-40
repeats (PF00400) (2 weak)
Length = 1108
Score = 33.9 bits (74), Expect = 1.7
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 2743 LTGGADGSVQLWEFGHPSCVWSPRAPGAFAKVTRIRFSDYGNKFAASDAD 2792
L G DG ++ W+ + + + S A G + +RF+ GN A + AD
Sbjct: 602 LAVGEDGQIKFWDMNNINVLTSTDAEGGLPALPHLRFNKDGNLLAVTTAD 651
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 33.5 bits (73), Expect = 2.3
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 2835 GSCSLVATAGHSSESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAGGSG-SLVSCGR 2893
G S + AG S + +WD P A V ++ H + W S L+S
Sbjct: 322 GESSALIAAGGSDPI--LRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASY 379
Query: 2894 RGDVLVWDVRTRLV 2907
G +++WD+RT ++
Sbjct: 380 DGKIMLWDLRTAVM 393
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4 (GP:17225206)[Podospora
anserina]
Length = 530
Score = 33.5 bits (73), Expect = 2.3
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 2888 LVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLED-LYALGAADGDIKVFSLTT 2946
LVS G G V WDV V L H ++C +P+ D + G+ D +KV+
Sbjct: 151 LVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWDARV 210
Query: 2947 H 2947
H
Sbjct: 211 H 211
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor rco-1
(SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 33.5 bits (73), Expect = 2.3
Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 18/130 (13%)
Query: 2743 LTGGADGSVQLWE---FGHPSCVWSPRA--PGAFAKVTRIRFSDYGNKFAASDADGNLAM 2797
LT DGS+++W+ F + V P+ PG VT + G + A DG++ +
Sbjct: 295 LTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGR-VPVTTCAWDRDGKRIAGGVGDGSIQI 353
Query: 2798 WHLHPAPQYHEAQNQASRRPFFTHQCHSKGISDFVFLGSCSLVATAGHSSESKNVAIWDT 2857
W L P SR + + H+ I+ F ++ + K +WD
Sbjct: 354 WSLKP--------GWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFDGSLK---VWD- 401
Query: 2858 LMPIKKALVV 2867
L +K+AL V
Sbjct: 402 LRQMKEALKV 411
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 33.5 bits (73), Expect = 2.3
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 13/118 (11%)
Query: 2872 HEGGAACVAWAGGSGSL--VSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDL 2929
H GG +A++ + L +CG + VWD T + R+ + H A + + E++
Sbjct: 461 HVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENI 520
Query: 2930 YAL--GAADGDIKVFSLTTHQLLYTFAGEHARSSFFKHIGQGVTQIYIDNAGRLFSCG 2985
+ A DG IK + LY G +R + T Y + RLFSCG
Sbjct: 521 QFIFSTALDGKIKAW-------LYDNMG--SRVDYEAPGRWCTTMAYSADGTRLFSCG 569
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 33.5 bits (73), Expect = 2.3
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 13/118 (11%)
Query: 2872 HEGGAACVAWAGGSGSL--VSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDL 2929
H GG +A++ + L +CG + VWD T + R+ + H A + + E++
Sbjct: 461 HVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENI 520
Query: 2930 YAL--GAADGDIKVFSLTTHQLLYTFAGEHARSSFFKHIGQGVTQIYIDNAGRLFSCG 2985
+ A DG IK + LY G +R + T Y + RLFSCG
Sbjct: 521 QFIFSTALDGKIKAW-------LYDNMG--SRVDYEAPGRWCTTMAYSADGTRLFSCG 569
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuclear
ribonucleoprotein Prp4p-related similar to U4/U6 small
nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta repeat
(7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 33.1 bits (72), Expect = 3.0
Identities = 44/218 (20%), Positives = 83/218 (38%), Gaps = 24/218 (11%)
Query: 2744 TGGADGSVQLWEFGHPSCVWSPRAPGAFAKVTRIRFSDYGNKFAASDADGNLAMWHLHPA 2803
T AD + +LW+ G ++ R+ F G + D +W ++
Sbjct: 315 TASADRTAKLWK---TDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTG 371
Query: 2804 PQYHEAQNQASRRPFFTHQCHSKGISDFVFLGSCSLVATAGHSSESKNVAIWDTLMPIKK 2863
+ + HS+ + F +L A+ G S ++ +WD + +
Sbjct: 372 AE------------LLLQEGHSRSVYGIAFQQDGALAASCGLDSLAR---VWD--LRTGR 414
Query: 2864 ALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLAL 2923
+++V + H V ++ L S G +WD+R R + + AH + +
Sbjct: 415 SILV-FQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKY 473
Query: 2924 APLEDLYALGAADGDIKV--FSLTTHQLLYTFAGEHAR 2959
P E Y L A D+KV +S L+ + AG ++
Sbjct: 474 EPQEG-YFLATASYDMKVNIWSGRDFSLVKSLAGHESK 510
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 32.7 bits (71), Expect = 3.9
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 2056 EEKQEINMDWGASTMDWGAPVTSNKTDELVLSWDDDDKESEASGASTPPLEMKMDQNDDE 2115
E+ EI++ A +D VTS + E S +DDK E +ST P M ++ND+E
Sbjct: 1722 EDVDEIHIPSVALPLDEQEKVTSTEKGETKSSEAEDDKPDEHVDSSTSP--MLSEKNDNE 1779
Query: 2116 GPAVPGTSD-NKEAEETPTVDI 2136
+ D + EE+ T+++
Sbjct: 1780 TQTSKTSEDVCMQQEESGTLEV 1801
>At5g24740.1 68418.m02920 expressed protein
Length = 3306
Score = 32.7 bits (71), Expect = 3.9
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 630 DVLDSAPVISMVTNHTNGTLNLWQLTFDDKSKFSQVLSIGHASRASGHRFRVNDITCHPV 689
D+ +S V+ + ++T+ LN+ Q + S S+V+S S G + + T H
Sbjct: 1406 DMDESIGVVRTICDNTDRVLNVLQTEVSENS--SEVMSFAARSENIGVKIHIPLCTSHTE 1463
Query: 690 LPLLLTTSHHNISD 703
P + T H IS+
Sbjct: 1464 FPGFMATDVHEISE 1477
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 32.7 bits (71), Expect = 3.9
Identities = 11/31 (35%), Positives = 19/31 (61%)
Query: 2912 QAHHAQIKCLALAPLEDLYALGAADGDIKVF 2942
+ HH + C+ AP + YA G+ DG I+++
Sbjct: 267 KGHHGPVHCVRFAPTGESYASGSEDGTIRIW 297
>At2g34260.2 68415.m04192 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 296
Score = 32.7 bits (71), Expect = 3.9
Identities = 17/63 (26%), Positives = 28/63 (44%)
Query: 2887 SLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFSLTT 2946
++ S +G V +WD R R H AH I + A + + DG + V +L T
Sbjct: 50 TIASGDDKGCVKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRT 109
Query: 2947 HQL 2949
++
Sbjct: 110 SKV 112
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 32.7 bits (71), Expect = 3.9
Identities = 17/63 (26%), Positives = 28/63 (44%)
Query: 2887 SLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFSLTT 2946
++ S +G V +WD R R H AH I + A + + DG + V +L T
Sbjct: 107 TIASGDDKGCVKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRT 166
Query: 2947 HQL 2949
++
Sbjct: 167 SKV 169
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 32.7 bits (71), Expect = 3.9
Identities = 20/54 (37%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 2847 SESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVW 2900
SE NV +D P K V H CVAW G L S G V+VW
Sbjct: 423 SEDSNVYFYDLTKP-KHTCVNKLQGHRFPVMCVAWNHGENLLASSDFYGVVIVW 475
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 32.3 bits (70), Expect = 5.2
Identities = 21/97 (21%), Positives = 38/97 (39%), Gaps = 6/97 (6%)
Query: 2851 NVAIWDTLMPIKKALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRL---- 2906
N +W+ +++ V HE V+W L +CGR V +W+++
Sbjct: 71 NTCVWENFATDSESVSVL-RGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEF 129
Query: 2907 -VRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVF 2942
L H +K + P D+ + D IK++
Sbjct: 130 DTIAVLTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIW 166
>At3g44750.1 68416.m04817 histone deacetylase, putative (HD2A)
contains Pfam domain, PF00096: Zinc finger, C2H2 type;
identical to cDNA putative histone deacetylase (HD2A)
GI:11066134
Length = 245
Score = 32.3 bits (70), Expect = 5.2
Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 2056 EEKQEINMDWGASTMDWGAPVTSNKTDELVLSWDDDDKESEASGASTPPLEMKMDQNDDE 2115
EE++E + G + P K E+ + DD++ ES++ G + + + ++
Sbjct: 106 EEEEEEEVPAGNAAKAVAKPKA--KPAEVKPAVDDEEDESDSDGMDEDDSDGEDSEEEEP 163
Query: 2116 GPAVPGTSDNKEAEETPTVDIMAQQLK 2142
P P +S + E TP + A++ K
Sbjct: 164 TPKKPASSKKRANETTPKAPVSAKKAK 190
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 31.9 bits (69), Expect = 6.9
Identities = 34/174 (19%), Positives = 67/174 (38%), Gaps = 11/174 (6%)
Query: 2774 VTRIRFSDYGNKFAASDADGNLAMWHLHPAPQYHEAQNQASRRPFFTHQCHSKGISDFVF 2833
V + F A + AD ++ +W ++ + + + + H C ++ F
Sbjct: 16 VLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGC---AVNTIRF 72
Query: 2834 LGSCSLVATAGHSSESKNVAIWDTLMPIKK----ALVVSWTCHEGGAACVAWAGGSGSLV 2889
S L+A+ E + IW L P + + S + H + W+ L+
Sbjct: 73 SPSGELLASGADGGE---LFIWK-LHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLI 128
Query: 2890 SCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFS 2943
S ++WDV V L AH ++ +A PL A ++D ++++
Sbjct: 129 SGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIYA 182
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 31.9 bits (69), Expect = 6.9
Identities = 34/174 (19%), Positives = 67/174 (38%), Gaps = 11/174 (6%)
Query: 2774 VTRIRFSDYGNKFAASDADGNLAMWHLHPAPQYHEAQNQASRRPFFTHQCHSKGISDFVF 2833
V + F A + AD ++ +W ++ + + + + H C ++ F
Sbjct: 16 VLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGC---AVNTIRF 72
Query: 2834 LGSCSLVATAGHSSESKNVAIWDTLMPIKK----ALVVSWTCHEGGAACVAWAGGSGSLV 2889
S L+A+ E + IW L P + + S + H + W+ L+
Sbjct: 73 SPSGELLASGADGGE---LFIWK-LHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLI 128
Query: 2890 SCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFS 2943
S ++WDV V L AH ++ +A PL A ++D ++++
Sbjct: 129 SGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIYA 182
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 31.9 bits (69), Expect = 6.9
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 191 FSPDGVLFATSGVNDRLVKIWYQNKVLVQAQGEHASPELNYTFIYVAHP 239
FSPDG+ FAT G D +K++ KV G+ + L TF A P
Sbjct: 39 FSPDGMFFATGGA-DTSIKLFEVPKVKQMISGDTQARPLIRTFYDHAEP 86
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 31.9 bits (69), Expect = 6.9
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 191 FSPDGVLFATSGVNDRLVKIWYQNKVLVQAQGEHASPELNYTFIYVAHP 239
FSPDG+ FAT G D +K++ KV G+ + L TF A P
Sbjct: 131 FSPDGMFFATGGA-DTSIKLFEVPKVKQMISGDTQARPLIRTFYDHAEP 178
>At5g58350.1 68418.m07306 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 571
Score = 31.9 bits (69), Expect = 6.9
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Query: 1855 RLGDLQLAMIVARLYESDNVLPASLKKLLMDEILGGETEDGEIDLERAHPDPFVRSMALW 1914
R+GD++ + + S + S K+LL D L + +P PF+ +
Sbjct: 245 RVGDIEAQRFIGKCLVSASKR-VSAKELLQDPFLASDESWMVYTSGAGNPKPFLNENEMD 303
Query: 1915 ELKRYGDSLDTLLSPAGRLHA 1935
LK D L T +S AG+L A
Sbjct: 304 TLKLEDDELRTEMSIAGKLGA 324
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 WD-40
repeats (PF0400); similar to WD-40 repeat protein MSI4
(SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 31.9 bits (69), Expect = 6.9
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 2743 LTGGADGSVQLWEFGHPSC--VWSP--RAPGAFAKVTRIRFS-DYGNKFAASDADGNLAM 2797
LTG AD +V++++ + + V SP + G A V +++S D + F +S DG L +
Sbjct: 343 LTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNI 402
Query: 2798 WHLHPAPQYHEAQNQASRRPFFTHQCHSKGISDF 2831
W + E + FF H H + DF
Sbjct: 403 WDCDRVGKKSERATKTPDGLFFQHAGHRDKVVDF 436
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 31.9 bits (69), Expect = 6.9
Identities = 25/125 (20%), Positives = 52/125 (41%), Gaps = 11/125 (8%)
Query: 2846 SSESKNVAIWDTLMPIKKALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTR 2905
S E+ +V W +M ++ H + W+ L S V +W++RT
Sbjct: 99 SGEAPDVENWKAVMTLRG--------HTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTG 150
Query: 2906 LVRHRLQAHHAQIKCLALAPLEDLYALGAADGDIKVFSLTTHQLLYTFAGEHAR---SSF 2962
+ L+ H + +K + P+ A + D + ++ + + + G A+ S+F
Sbjct: 151 MCTTVLRGHLSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWGMAHRTDGHWAKSLGSTF 210
Query: 2963 FKHIG 2967
F+ +G
Sbjct: 211 FRRLG 215
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374 from
[Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 31.9 bits (69), Expect = 6.9
Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 6/120 (5%)
Query: 2872 HEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYA 2931
H +C++ G L S + VW + +QAH I +A A +DL
Sbjct: 248 HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVA-AGFDDLLF 306
Query: 2932 LGAADGDIKVFSLTTHQLLYTFAGEHARSSFFKHIGQGVTQIYIDNAGRLFSCG-ADGTM 2990
G+ADG +KV+ + L +H + VT + ++ + CG +DGT+
Sbjct: 307 TGSADGTLKVWK----RELQGKGTKHFLVNVLMKQENAVTALAVNITAAVVYCGSSDGTV 362
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 31.9 bits (69), Expect = 6.9
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 2743 LTGGADGSVQLWEFGHPSC--VWSP--RAPGAFAKVTRIRFS-DYGNKFAASDADGNLAM 2797
LTG AD +V+L++ + V SP + G A V +++S D + F +S DG L +
Sbjct: 354 LTGSADNTVRLFDRRKLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNI 413
Query: 2798 WHLHPAPQYHEAQNQASRRPFFTHQCHSKGISDF 2831
W + + ++ FF H H + DF
Sbjct: 414 WDYDRVSKKSDRAAKSPAGLFFQHAGHRDKVVDF 447
>At1g80950.1 68414.m09498 phospholipid/glycerol acyltransferase family
protein low similarity to SP|Q59601
1-acyl-sn-glycerol-3-phosphate acyltransferase (EC
2.3.1.51) {Neisseria gonorrhoeae}; contains Pfam profile
PF01553: Acyltransferase
Length = 398
Score = 31.9 bits (69), Expect = 6.9
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 1279 VSSDLAQANLKAMKESINNNRPILRKASSLAAPLFVEEIRWMQLRRIELKTADGLPPLPM 1338
+ S+L N + S +RP+L+ S LAA + + ++ R +L GL P PM
Sbjct: 1 MESELKDLNSNSNPPSSKEDRPLLKSESDLAAAIEELDKKFAPYARTDLYGTMGLGPFPM 60
>At1g60095.1 68414.m06771 jacalin lectin family protein contains
similarity to myrosinase-binding protein homolog
[Arabidopsis thaliana] GI:2997767;
Length = 531
Score = 31.9 bits (69), Expect = 6.9
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 96 HGLEYRWVQTGKFVADGPITALSWNLEGT 124
HG+ Y WVQ G+FV D P ++ ++EGT
Sbjct: 289 HGMFYSWVQQGEFVVDYPNEFIT-SVEGT 316
>At1g04700.1 68414.m00467 protein kinase family protein low similarity
to EDR1 [Arabidopsis thaliana] GI:11127925; contains Pfam
profile: PF00069 Eukaryotic protein kinase domain
Length = 1042
Score = 31.9 bits (69), Expect = 6.9
Identities = 43/205 (20%), Positives = 85/205 (41%), Gaps = 14/205 (6%)
Query: 888 TMADAENPDAGVDGCDVNTITETGLEAIVDLRKTAVFNEPFYIVVLERTDGGSTVHMWRL 947
T +D+++ + V VNT E L+ K F + +L R+ +T +
Sbjct: 537 TSSDSQDSGSSVFSLSVNT-NENYLDC--SREKFNGFQHDMSLDILIRSHTSATDQLCST 593
Query: 948 TVSS-QGDPADDLTN-SMMYVPDSALVQEEEGESRKNSVSMDNDRTLPPPQTNSHLSIST 1005
T SS + D + TN ++++ ++ + E+ NS D ++LP ++ + +
Sbjct: 594 TKSSDKADYSSPNTNFPVVFLRQEPMIPRHDLET--NSDDSDTQKSLPREESIHYSGLPL 651
Query: 1006 KKVCECPLSLPDGVDVIHATPAAGHLSSASIYPACLAPYILATACSDSTLRFWRCNVTNN 1065
+KV + +H + S + P + + SD+ L N
Sbjct: 652 RKVGSRETTF------MHTQGSDDFFKSKLLGPQLIVEDVTNEVISDNLLSATIVPQVNR 705
Query: 1066 ENDDFEYTW-KEWEMMNKDQESTID 1089
E+DD ++ +E E+ N D ES ++
Sbjct: 706 ESDDDHKSYTREKEITNADHESEME 730
>At4g31570.1 68417.m04483 expressed protein
Length = 2712
Score = 31.5 bits (68), Expect = 9.1
Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 12/139 (8%)
Query: 1186 MQKKQRLNQVLQTLSSDESRNGRNGEGDTGKSAGLLAVPSFSTLQSLRRSIMENGNTCPL 1245
+ K QR++Q+ QT+S+ + E + A L + + +Q S+ E+
Sbjct: 1956 VMKLQRISQLFQTMSTTVT--SAEQESRKSRRAAELLLAELNEVQETNDSLQED------ 2007
Query: 1246 TQKHLVQLDWVSKE-DGSHILTVAVGSRVLLFTPVSSDLAQ---ANLKAMKESINNNRPI 1301
K ++ +S+E D + V SR + VS++ A L + S+N+ R I
Sbjct: 2008 LSKFTYEIQQLSREKDAAEAAKVEAISRFENLSAVSNEEKNKLYAQLLSCGTSVNSLRKI 2067
Query: 1302 LRKASSLAAPLFVEEIRWM 1320
L +S A +F+ ++ ++
Sbjct: 2068 LAGTNSCLADIFIMDMEFL 2086
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 31.5 bits (68), Expect = 9.1
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 2708 TGNSSPLNPNAPQVPVGMASQTGRGASVHYNMYAD---LTGGADGSVQLWEFGH--PSCV 2762
+G+ S LNP + +Q +S+ YN+ TG D SV+LW+ + PSC+
Sbjct: 386 SGSDSDLNPT---YTIQAHAQDRGVSSISYNISTPNLLATGSMDKSVKLWDLSNNEPSCI 442
Query: 2763 WSPRAPGAFAKVTRIRFS-DYGNKFAASDADGNLAMW 2798
+ P A A V I F+ D A + G L +W
Sbjct: 443 -ATHQPNAGA-VFSISFAVDNPFLLAIGGSKGELHVW 477
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 31.5 bits (68), Expect = 9.1
Identities = 29/131 (22%), Positives = 55/131 (41%), Gaps = 14/131 (10%)
Query: 2870 TCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTR-LVRHRLQAHHAQIKCLALAPLED 2928
T HEG + W+ +VS +W++ ++ +V L H ++ ++ +
Sbjct: 232 TGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCIS--DS 289
Query: 2929 LYALGAADGDIKVFSLTTHQLLYTFAGEHARSSFFKHIGQGVTQ-IYIDNAGRLFSCGAD 2987
L D +V+ + QL +HIG+G+ + +Y N+ L + G D
Sbjct: 290 LIVTAGEDCTCRVWGVDGTQL----------EVIKEHIGRGIWRCLYDPNSSLLVTAGFD 339
Query: 2988 GTMKVRKLPER 2998
+KV +L R
Sbjct: 340 SAIKVHQLHNR 350
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 31.5 bits (68), Expect = 9.1
Identities = 29/131 (22%), Positives = 55/131 (41%), Gaps = 14/131 (10%)
Query: 2870 TCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTR-LVRHRLQAHHAQIKCLALAPLED 2928
T HEG + W+ +VS +W++ ++ +V L H ++ ++ +
Sbjct: 232 TGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCIS--DS 289
Query: 2929 LYALGAADGDIKVFSLTTHQLLYTFAGEHARSSFFKHIGQGVTQ-IYIDNAGRLFSCGAD 2987
L D +V+ + QL +HIG+G+ + +Y N+ L + G D
Sbjct: 290 LIVTAGEDCTCRVWGVDGTQL----------EVIKEHIGRGIWRCLYDPNSSLLVTAGFD 339
Query: 2988 GTMKVRKLPER 2998
+KV +L R
Sbjct: 340 SAIKVHQLHNR 350
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 31.5 bits (68), Expect = 9.1
Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Query: 2874 GGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYALG 2933
G A A GS + SC D+++W +T + + + A++P A
Sbjct: 198 GATATYGTADGSVVIASCSEGTDIVLWHGKTGRNLGHVDTNQLKNHMAAVSPNGRFLAAA 257
Query: 2934 AADGDIKVFSLTTHQLLYTFAGEHARSSFFKHIGQGVTQI-YIDNAGRLFSCGADGTMKV 2992
A D+KV+ + + E +R K VT + + N+ ++ + DG+++V
Sbjct: 258 AFTADVKVWEIVYQK--DGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITASKDGSIRV 315
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 31.5 bits (68), Expect = 9.1
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 2743 LTGGADGSVQLWEFGHPSCVWSPRAPGAFAKVTRIRFSDYGNKFAASDAD 2792
L G D ++ W + + + A G + R+RF+ GN A + AD
Sbjct: 603 LAVGEDNQIKFWNMDNTNLLTVVEAEGGLPNLPRLRFNKDGNLLAVTTAD 652
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 31.5 bits (68), Expect = 9.1
Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 13/101 (12%)
Query: 2888 LVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYAL--GAADGDIKVFSLT 2945
+V+CG + VWD T H + H A + + E++ + A DG IK +
Sbjct: 481 VVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW--- 537
Query: 2946 THQLLYTFAGEHARSSFFKHIGQGVTQI-YIDNAGRLFSCG 2985
LY G + G+ T + Y + RLFSCG
Sbjct: 538 ----LYDNMGSRVD---YDAPGRSCTSMAYCADGTRLFSCG 571
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 31.5 bits (68), Expect = 9.1
Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 13/101 (12%)
Query: 2888 LVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKCLALAPLEDLYAL--GAADGDIKVFSLT 2945
+V+CG + VWD T H + H A + + E++ + A DG IK +
Sbjct: 481 VVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW--- 537
Query: 2946 THQLLYTFAGEHARSSFFKHIGQGVTQI-YIDNAGRLFSCG 2985
LY G + G+ T + Y + RLFSCG
Sbjct: 538 ----LYDNMGSRVD---YDAPGRSCTSMAYCADGTRLFSCG 571
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 31.5 bits (68), Expect = 9.1
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 2872 HEGGAACV-AWAGGSGSLVSCGRRGDVLVWDVRTRLVR--HRLQAHHAQIKCLALAPLED 2928
H+ G+ V A G L S G + VW+V ++ ++ H + + C +L+ +
Sbjct: 849 HQSGSGAVTALIYHKGLLFSGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGE 908
Query: 2929 LYALGAADGDIKVFSLTTHQL 2949
G+AD I+V+ + +L
Sbjct: 909 CVLSGSADKTIRVWQIVKGKL 929
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 31.5 bits (68), Expect = 9.1
Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Query: 2861 IKKALVVSWTCHEGGAACVAWAGGSGSLVSCGRRGDVLVWDVRTRLVRHRLQAHHAQIKC 2920
+KK W H +C++ G L S + VW + + AH +
Sbjct: 194 VKKHRTALWIKHADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNS 253
Query: 2921 LALAPLEDLYALGAADGDIKVF 2942
+ ++ E + G+ADG +K +
Sbjct: 254 V-VSTTEAIVFSGSADGTVKAW 274
>At1g35920.1 68414.m04461 hypothetical protein includes At5g34960,
At2g14450, At1g35920
Length = 567
Score = 31.5 bits (68), Expect = 9.1
Identities = 18/62 (29%), Positives = 28/62 (45%)
Query: 954 DPADDLTNSMMYVPDSALVQEEEGESRKNSVSMDNDRTLPPPQTNSHLSISTKKVCECPL 1013
D A+ + + + D L+ E G +S + + R + S S S+KKVC PL
Sbjct: 431 DSAEHVNPASIVSGDQVLLMLENGNGSPDSTTPSSKRVYARETSGSEGSSSSKKVCVVPL 490
Query: 1014 SL 1015
L
Sbjct: 491 DL 492
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.133 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,489,218
Number of Sequences: 28952
Number of extensions: 3138260
Number of successful extensions: 9053
Number of sequences better than 10.0: 112
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 8605
Number of HSP's gapped (non-prelim): 496
length of query: 3007
length of database: 12,070,560
effective HSP length: 94
effective length of query: 2913
effective length of database: 9,349,072
effective search space: 27233846736
effective search space used: 27233846736
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 68 (31.5 bits)
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