GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001411-TA|BGIBMGA001411-PA|IPR000608|Ubiquitin-
conjugating enzyme, E2
         (353 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    27   0.78 
AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    25   2.4  
AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long fo...    25   4.2  
DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       24   7.3  
DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    24   7.3  
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    24   7.3  
DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.      24   7.3  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     23   9.7  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     23   9.7  

>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 27.1 bits (57), Expect = 0.78
 Identities = 9/23 (39%), Positives = 17/23 (73%)

Query: 21  EIHANITETYPTTPPVWFAESED 43
           E+   +T+ +PT PPV++ E++D
Sbjct: 402 ELGRIVTDLFPTHPPVYWPETDD 424


>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 15/50 (30%), Positives = 21/50 (42%)

Query: 139 EDAGRSNKDDMETEHLATLERLRQNQRQDYLSGSVSGSLQATDRLMKELR 188
           E       D++E   L   E   + Q  DYL   + G LQA   L + +R
Sbjct: 99  ESEESEESDELEEARLVAEELEERQQELDYLKRYLVGRLQAVAILDRRVR 148


>AF457552-1|AAL68782.1|  311|Anopheles gambiae D7 protein long form
           protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 7/77 (9%)

Query: 136 EMVEDAGRSNKDDMETEHLATLERLRQNQRQDYLSGSVSGSLQATDRLMKELRDIYRSHS 195
           E+V D    NK D+E E  + L         DY S  ++ S++      ++ R+ +  H 
Sbjct: 228 EVVRDFNLINKSDLEPEVRSVLASCTGTHAYDYYSCLLNSSVK------EDFRNAFYFHE 281

Query: 196 FKNNMYSIELVNDSLYE 212
            ++  Y   L    +YE
Sbjct: 282 LRSANYGY-LAMGKVYE 297


>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 309 ARIQFSATKVVSQTQYSLARAQQSFKCLVQIHEKNGWFTPP 349
           AR+      V  QT  +LA++QQ+F+   Q   +   F  P
Sbjct: 10  ARLLLLLGCVALQTSAALAQSQQTFRSQPQYGNRGSSFAAP 50


>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 10/27 (37%), Positives = 17/27 (62%)

Query: 325 SLARAQQSFKCLVQIHEKNGWFTPPKE 351
           +LA+ ++S +C +   + NG F P KE
Sbjct: 271 ALAQYKKSSRCAICGVQTNGMFNPAKE 297


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 10/27 (37%), Positives = 17/27 (62%)

Query: 325 SLARAQQSFKCLVQIHEKNGWFTPPKE 351
           +LA+ ++S +C +   + NG F P KE
Sbjct: 271 ALAQYKKSSRCAICGVQTNGMFNPAKE 297


>DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.
          Length = 353

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 25/126 (19%), Positives = 58/126 (46%), Gaps = 8/126 (6%)

Query: 139 EDAGRSNKDDMETEHLATLERLRQNQRQDYLSGSVSGSLQATDRLMKELRDIYRS-HSFK 197
           E+A    + + E E    L R +++ R++     +          +K++R I+ S +S +
Sbjct: 7   EEAKEQKRINQEIER--QLRRDKRDARRELKLLLLGTGESGKSTFIKQMRIIHGSGYSDE 64

Query: 198 NNMYSIELVNDSLY-EWNIRLRSVDPDSPLHNDXXXXXXXXGKDSILLNIIFKETYPFEP 256
           +    I+LV  +++      +R++D    L++D            ++ ++ F+    FEP
Sbjct: 65  DKRGFIKLVYQNIFMAMQSMIRAMDLLKILYSDPANIEHA----ELIRSVDFETVTTFEP 120

Query: 257 PFVRVV 262
           P+V+ +
Sbjct: 121 PYVQAI 126


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.4 bits (48), Expect = 9.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)

Query: 16  NGKKYEIHANITETYP 31
           NGK   ++AN T TYP
Sbjct: 194 NGKYNVVYANYTATYP 209


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.4 bits (48), Expect = 9.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)

Query: 16  NGKKYEIHANITETYP 31
           NGK   ++AN T TYP
Sbjct: 194 NGKYNVVYANYTATYP 209


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.133    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 329,947
Number of Sequences: 2123
Number of extensions: 12371
Number of successful extensions: 24
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 9
length of query: 353
length of database: 516,269
effective HSP length: 65
effective length of query: 288
effective length of database: 378,274
effective search space: 108942912
effective search space used: 108942912
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 48 (23.4 bits)