Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001410-TA|BGIBMGA001410-PA|IPR007087|Zinc finger,
C2H2-type
(1054 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29... 38 0.032
02_04_0194 + 20820985-20821027,20822168-20822367,20822477-208225... 37 0.074
01_06_1656 + 38946922-38947542,38947640-38947739,38948045-389481... 37 0.098
11_06_0710 - 26492093-26493460 36 0.17
03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524 36 0.17
11_01_0521 + 4083594-4083763,4083765-4083963,4084059-4084244,408... 35 0.30
09_04_0087 + 14476539-14476675,14478876-14479635,14479720-144798... 34 0.52
02_01_0102 - 749122-749799,750123-750371,750753-750851,751380-75... 34 0.69
01_06_1535 + 38057802-38057999,38058338-38058437,38058730-380588... 33 0.91
11_04_0391 + 17127309-17127449,17127886-17127950,17129209-171293... 32 2.1
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85... 32 2.1
11_06_0021 + 19314211-19314311,19315202-19315307,19317135-193174... 32 2.8
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 32 2.8
11_06_0693 - 26334574-26336121 31 3.7
08_02_0276 + 15220151-15220465,15222587-15222730,15223179-15223367 31 3.7
07_03_1459 + 26681619-26682419,26682600-26682912,26683861-26684672 31 3.7
05_07_0093 - 27648656-27648736,27649034-27649147,27649229-276492... 31 3.7
01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,117... 31 3.7
10_08_0290 + 16549048-16549262,16549770-16549833,16550106-165502... 31 4.9
07_03_0435 + 18182657-18183509,18184477-18184574,18184663-181848... 31 4.9
06_03_1283 - 28957729-28959258,28959354-28959550,28959824-289600... 31 4.9
01_05_0474 - 22552599-22552687,22553494-22553631,22553766-225544... 31 4.9
09_02_0362 + 7860088-7860197,7861606-7861636,7861738-7861801,786... 30 8.5
07_01_0463 + 3502708-3503535 30 8.5
05_06_0219 + 26479708-26479710,26481045-26481173,26481675-264818... 30 8.5
05_01_0423 + 3322335-3322385,3322618-3323532,3323636-3323878 30 8.5
03_05_0890 - 28547462-28547545,28548451-28548528,28548641-285488... 30 8.5
02_04_0001 - 18816492-18816741,18816881-18817050,18817244-188173... 30 8.5
02_03_0273 + 17173983-17174339,17174423-17174575,17174638-171747... 30 8.5
01_01_0484 - 3558941-3559303,3559439-3559560,3560596-3560743,356... 30 8.5
>05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-292563,
292685-292743,292827-292942
Length = 401
Score = 38.3 bits (85), Expect = 0.032
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 990 FRGCRDNFKDLSSLKQHCETVHSQSLHRCSLPGCNSAFFSRTKRNIHYESHVSRR 1044
+ C F D+++L++H VH++ + C PGC F +K H+ H ++
Sbjct: 91 YENCGKTFVDVAALRKHAH-VHNERQYICQEPGCGKKFVDSSKLKRHHLIHTGQK 144
Score = 37.1 bits (82), Expect = 0.074
Identities = 18/57 (31%), Positives = 25/57 (43%)
Query: 984 KDGTYPFRGCRDNFKDLSSLKQHCETVHSQSLHRCSLPGCNSAFFSRTKRNIHYESH 1040
KD P GC F +L+ H +T ++ H C P C F S +K H + H
Sbjct: 144 KDFICPHPGCGKAFSLDFNLRSHLKTHALENYHVCPFPACGKRFTSDSKLKSHVKGH 200
Score = 32.3 bits (70), Expect = 2.1
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 992 GCRDNFKDLSSLKQHCETVHS-QSLHRCSLPGCNSAFFSRTKRNIHYESH 1040
GC F D S LK+H +H+ Q C PGC AF H ++H
Sbjct: 122 GCGKKFVDSSKLKRH-HLIHTGQKDFICPHPGCGKAFSLDFNLRSHLKTH 170
>02_04_0194 + 20820985-20821027,20822168-20822367,20822477-20822566,
20822820-20822825,20822866-20823009,20823089-20823580
Length = 324
Score = 37.1 bits (82), Expect = 0.074
Identities = 15/55 (27%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 990 FRGCRDNFKDLSSLKQHCETVHSQSLHRCSLPGCNSAFFSRTKRNIHYESHVSRR 1044
+ GC F D +L++H VH + + C GC+ F +K H+ H +
Sbjct: 47 YEGCGKTFVDAGALRKHAH-VHGERQYVCHYAGCDKKFLDSSKLKRHFLIHTGEK 100
>01_06_1656 +
38946922-38947542,38947640-38947739,38948045-38948189,
38948868-38948991,38949443-38949960,38950111-38950458,
38950557-38950638,38951309-38951707,38951790-38951927,
38952063-38952108,38952200-38952369
Length = 896
Score = 36.7 bits (81), Expect = 0.098
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Query: 568 DCDQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYL-AQNRVPSEEEK 626
D + N+ NE K + LK+K K +R Q + + L Q R EE +
Sbjct: 320 DSQLQKNTSTNEKDTQKAQKQVEKELKQKEKEEARMRKQQKKQQEEALREQKRREKEEAE 379
Query: 627 VLDLKRIKKEPHHYERRTEEAETSITNKTHIKQEPTIVEEE 667
+ +R ++E E++ E E + T K KQ+ +E+
Sbjct: 380 MKKQQRKQEEEAQKEQKRREKEEAETRKQQKKQQEEAEKEQ 420
>11_06_0710 - 26492093-26493460
Length = 455
Score = 35.9 bits (79), Expect = 0.17
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 16/156 (10%)
Query: 557 NKSYCMEDSETDCDQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLA 616
+KS +D + D +++S + S DD + K K+K NP + E+D
Sbjct: 144 SKSKSSDDDDDDAEKKSKKKSKNS-----DDDEDDKKKSKKKPKNP-----DDDEDDKKK 193
Query: 617 QNRVPSEEEKVLDLKRIKKEPHHYERRTEEAETSITNKTHIKQEPTIVEEEPADMTYNVQ 676
+ S+E+ K+ KK+ + EE + K+ K + + +EE + +
Sbjct: 194 SKKKSSDEDND-GAKKKKKKKSKGKSSDEEDDEKPKKKSKSKSKSSSSDEEDEKKSKSEG 252
Query: 677 NLRVK-----EEQIERPETIKSSTPTNEHYSSENSL 707
K EE + +S P NEH+S SL
Sbjct: 253 QAAAKPKEEDEEGGSASASASTSAPKNEHHSGTMSL 288
>03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524
Length = 651
Score = 35.9 bits (79), Expect = 0.17
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 775 FVSITDIPVDNDNPKKCTACGRLFQNVYVLKTHYQTAHLKLRYKCNFDGCRAAYSSRKGR 834
F + ++ V N +CGR F++ L+ H + + YKC ++GC A+ R
Sbjct: 551 FKNRAELSVHKKNTCTVKSCGRHFRSHKYLRRHQSIHNDDMPYKCPWEGCSMAFKWSWDR 610
Query: 835 DQH 837
+H
Sbjct: 611 GEH 613
Score = 35.5 bits (78), Expect = 0.23
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 984 KDGTYPFRGCRDNFKDLSSLKQHCETVHSQSL-HRCSLPGCNSAFFSRTKRNIHYESHVS 1042
K T + C +F+ L++H +++H+ + ++C GC+ AF R H++ H
Sbjct: 561 KKNTCTVKSCGRHFRSHKYLRRH-QSIHNDDMPYKCPWEGCSMAFKWSWDRGEHFQVHAG 619
Query: 1043 RR 1044
+R
Sbjct: 620 KR 621
>11_01_0521 +
4083594-4083763,4083765-4083963,4084059-4084244,
4085834-4086025,4086979-4087200,4089238-4089444,
4089681-4090082,4090201-4090230,4090307-4090318
Length = 539
Score = 35.1 bits (77), Expect = 0.30
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 656 HIKQEPTIVEEEPADMTYNVQNLRVKEEQIERPETIKSSTPTNEHYSSENSLKRLESLSK 715
H ++ T +E++ + T +VQ+L+VK + T + T N+H+S EN ++ LES +
Sbjct: 224 HHEERITTLEQDISQCTQHVQSLQVKVKS----NTSQLETNNNDHHSLENRIQVLESTER 279
Query: 716 GEFPEIPKKND 726
+ K +
Sbjct: 280 QNASRLVKMEE 290
>09_04_0087 +
14476539-14476675,14478876-14479635,14479720-14479871,
14479958-14480024,14480632-14480831,14480915-14481068,
14481585-14481669,14481766-14481857,14482575-14482766,
14482867-14482992,14483072-14483125,14483494-14483550,
14484509-14484606,14484703-14485038,14485116-14485203,
14486891-14487016,14487082-14487138,14488054-14488133,
14488228-14488270,14488948-14489034,14489331-14489420,
14489996-14490054,14490141-14490231,14490330-14490495,
14490662-14490755,14491787-14492909
Length = 1537
Score = 34.3 bits (75), Expect = 0.52
Identities = 21/90 (23%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 563 EDSETDCDQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQNRVPS 622
+D+E + +Q +D E K+D++ E L+ + K +L+ EN+ +N
Sbjct: 232 KDNEKEKEQLMGTDEKEKEKEKEDENEEEKLEEEEKKDKEEKLEEKEKENE--EENGNEK 289
Query: 623 EEEKVLDLKRIKK-EPHHYERRTEEAETSI 651
++E +++++K + H + E+AET +
Sbjct: 290 DKENDNEIEKVKNTKLVHIDYILEKAETGL 319
Score = 30.7 bits (66), Expect = 6.4
Identities = 17/92 (18%), Positives = 41/92 (44%)
Query: 563 EDSETDCDQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQNRVPS 622
E + D ++ + DN + + K++++ + K K + + + + D + ++
Sbjct: 205 EKEKEDKEEETEKDNEKEKEDKEEETKKDNEKEKEQLMGTDEKEKEKEKEDENEEEKLEE 264
Query: 623 EEEKVLDLKRIKKEPHHYERRTEEAETSITNK 654
EE+K + K +KE + E E + N+
Sbjct: 265 EEKKDKEEKLEEKEKENEEENGNEKDKENDNE 296
>02_01_0102 - 749122-749799,750123-750371,750753-750851,751380-751889,
752025-753905,754093-754296,754807-754899,755036-755122,
755241-755328,755533-755645,755943-757259,757398-758672,
759166-759273
Length = 2233
Score = 33.9 bits (74), Expect = 0.69
Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 831 RKGRDQHSGNVTLHRKLSSDDFRVTDDSS--KLLDKIRDQMELIASFKEEE 879
R+GR + SG +++R++ DDF +DD S + + ++ E I F++EE
Sbjct: 1591 RRGRPKGSGKYSIYREIDDDDFEESDDDSEERNTSSLPEEGE-IGEFEDEE 1640
>01_06_1535 +
38057802-38057999,38058338-38058437,38058730-38058890,
38059166-38059363,38059442-38059534,38059732-38059854,
38060637-38060884,38061004-38061175,38061407-38061493,
38061523-38061786,38062415-38062577,38062839-38062926,
38063010-38063079,38063566-38063694,38063773-38063811,
38065539-38065760,38065935-38065999,38066095-38066288,
38066539-38066805,38066908-38066995,38067091-38067216,
38067291-38067400,38067523-38067671
Length = 1117
Score = 33.5 bits (73), Expect = 0.91
Identities = 28/108 (25%), Positives = 60/108 (55%), Gaps = 13/108 (12%)
Query: 590 SEVLKRKRKNLNPLRLQNNAGEN-----DYLAQNRVPSEEEKVLDLKRIKKEPHHYERRT 644
+E L+ +K L+ +NN E+ L+ R PS+++K++ L +++E +YE+
Sbjct: 238 NEQLEDLKKQLDESVRENNEMEHRLLNCSSLSYERTPSDDQKLIKL--LQEELRNYEKEV 295
Query: 645 EEAETSITNKTHIK-QEPTIVEE----EPADMTYN-VQNLRVKEEQIE 686
+EA ++ T+++ + I+EE E A+M + +Q + K +++E
Sbjct: 296 DEARRLKSSHTNVELLKEKILEEQGCRERAEMELSKLQEIEAKAQKLE 343
>11_04_0391 +
17127309-17127449,17127886-17127950,17129209-17129305,
17129729-17130193,17130505-17130528
Length = 263
Score = 32.3 bits (70), Expect = 2.1
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 792 TACGRLFQNVYVLKTHYQTAHL-KLRYKCNFDGCRAAYSSRKGRDQH 837
+ CG + + HY+T H Y+C +GC S K R QH
Sbjct: 76 SGCGAHLDCLENFEDHYRTRHTASCSYECLVEGCGVKLKSYKSRQQH 122
>02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-855315,
856891-857031,857259-857372
Length = 369
Score = 32.3 bits (70), Expect = 2.1
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 990 FRGCRDNFKDLSSLKQHCETVHSQ-SLHRCSLPGCNSAFFSRTKRNIHYES 1039
F GC +F + S+L +H + H Q C GC F + R+ H +S
Sbjct: 248 FEGCECSFSNKSNLTKHIKASHDQVKPFACRFTGCEKVFPYKHVRDNHEKS 298
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 7/57 (12%)
Query: 992 GCRDNFKDLSSLKQHCETVH-------SQSLHRCSLPGCNSAFFSRTKRNIHYESHV 1041
GC F +++++H + +H S C GCN F +K H ESHV
Sbjct: 123 GCGRKFSIKANMQRHVKEIHEDETATKSNRQFVCKEEGCNKVFKYASKMKKHEESHV 179
Score = 30.3 bits (65), Expect = 8.5
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 790 KCTACGR--LFQNVYV-LKTHYQTAHLKLRYKCNFDGCRAAYSSRKGRDQH 837
+C CG L +N+ L+ H + + R KC+F+GC ++S++ +H
Sbjct: 215 QCDICGEKHLKKNIKRHLRAHEEVPSTE-RIKCSFEGCECSFSNKSNLTKH 264
>11_06_0021 +
19314211-19314311,19315202-19315307,19317135-19317412,
19318587-19318692,19318812-19319159,19319237-19319313,
19319392-19319516,19319884-19320135,19320314-19320336
Length = 471
Score = 31.9 bits (69), Expect = 2.8
Identities = 32/160 (20%), Positives = 69/160 (43%), Gaps = 16/160 (10%)
Query: 563 EDSETDCDQRSNSDNNESTDFKKDDSHSEVLKRK---RKNLNPLRLQ--NNAGENDYLAQ 617
+ SETD DQ + D++ +D + + ++KR R+N + LQ E D Q
Sbjct: 121 KSSETDRDQEGDKDHSSGSDISEATIKNAIVKRASYFRENSETITLQGVRRTLEEDLKLQ 180
Query: 618 NRVPSEEEKVL--DLKRIKKEPHHYERRTEEAET-------SITNKTHIKQ--EPTIVEE 666
+ + + +L I +EP + ++T + E+ + N +Q + + + +
Sbjct: 181 KKALDAYKSFISTELDNILQEPANGTKKTSKTESHKDSGQKTSKNSKRARQDSDTSEIND 240
Query: 667 EPADMTYNVQNLRVKEEQIERPETIKSSTPTNEHYSSENS 706
+ + ++ R K+++ E+ + +K T NS
Sbjct: 241 SHCERGDSDEDARPKKKKAEKGKAVKRQKKTTVEKQLSNS 280
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 31.9 bits (69), Expect = 2.8
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 648 ETSITNKTHIKQEPTIVE---EEPADMTYNVQNLRVKEEQIERPETIKSSTPTNEHYSSE 704
ET +T QEP + E EPA+ +N+ + EE+++ E ++ T T H S+
Sbjct: 1417 ETEVTVDKSSAQEPELEEIKNTEPAEQEHNITETGLPEEEMKDNEAME--TETVPHDSNI 1474
Query: 705 NSLKRL 710
S+K L
Sbjct: 1475 ESIKEL 1480
>11_06_0693 - 26334574-26336121
Length = 515
Score = 31.5 bits (68), Expect = 3.7
Identities = 17/57 (29%), Positives = 26/57 (45%)
Query: 252 CPPMAMPSAFSHPAAMVAALSQNPMGLASLQALLPQISTKPVELPDKSVNSFSQSKP 308
C P + PS H A + LS P L L+P + P+ L + ++ + S S P
Sbjct: 54 CLPSSPPSPHHHSLAALLLLSSPPPPALPLLRLVPPHAPPPLPLLNAAIKALSASSP 110
>08_02_0276 + 15220151-15220465,15222587-15222730,15223179-15223367
Length = 215
Score = 31.5 bits (68), Expect = 3.7
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Query: 600 LNPLRLQNNAGENDYLAQNRVPSEEEKVLDLKRIKKEPHHYERRTEEAETSITNKTHIKQ 659
+N G+ D A +EEEK +R + R E ++ NK +
Sbjct: 70 MNGANGNGGGGDGDQAAAAAAAAEEEKATKRRRYVPVSVVEDERQESGKSDDENKAN-DG 128
Query: 660 EPTIVEEEPADMTYNVQNLRVKEEQ 684
EP+ E EP++ N+ + + E Q
Sbjct: 129 EPSSAETEPSNGKTNINDTPMDESQ 153
>07_03_1459 + 26681619-26682419,26682600-26682912,26683861-26684672
Length = 641
Score = 31.5 bits (68), Expect = 3.7
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 236 LMRSQFFNFPLQANLPCPPMAMPSAFSHPAAMVAALSQNPMGLASLQALLPQIS---TKP 292
+ S F +PL A L P ++ S + + N +GLA LQ+LL IS TK
Sbjct: 221 IQNSSFDLYPLMAFLRFQPFSIKSYWQSLIQLPLERKNNGIGLARLQSLLGAISLRRTKE 280
Query: 293 VELPDKSVNS 302
E KS+ S
Sbjct: 281 TESGSKSLVS 290
>05_07_0093 -
27648656-27648736,27649034-27649147,27649229-27649288,
27649464-27649687,27649799-27649886,27650326-27650532,
27650566-27650784,27650903-27651001,27651439-27651504,
27651654-27651737,27651829-27651888,27652041-27652325,
27652789-27652836,27652988-27653034,27653442-27653556,
27653958-27654032,27654227-27654298,27654944-27656124,
27656613-27656757
Length = 1089
Score = 31.5 bits (68), Expect = 3.7
Identities = 32/146 (21%), Positives = 60/146 (41%), Gaps = 15/146 (10%)
Query: 570 DQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQNRVPSEEEKVLD 629
D+ S ++E+TD SH EV++ NA END A NR ++ V++
Sbjct: 295 DRNEISSSHENTDTVDQASHVEVIEHDE--------HTNAAENDEEA-NRTEAQVATVVE 345
Query: 630 LKRIKKEPHHYERRTEEAETSITNKTHIKQEPTIVEEEPADMTYNVQNLRVKEEQIERPE 689
++E + + + I + Q ++ AD+ + + + + E
Sbjct: 346 ----REENTMVQLEDLSSMSIIVSNDSNSQNESV--PTSADVPVGLVEVGSNSNDLRKEE 399
Query: 690 TIKSSTPTNEHYSSENSLKRLESLSK 715
I+ S T+ H S ++ LE L +
Sbjct: 400 NIQGSVTTSNHLESVGAVAELEKLRR 425
>01_01_0128 - 1167904-1168749,1168790-1168863,1169419-1169491,
1171148-1171398,1171442-1171687,1172220-1172415,
1172796-1172876,1172966-1173169,1173671-1173880,
1173953-1174174,1174437-1174480,1174974-1175052,
1175066-1175227,1175337-1175564,1175786-1175815,
1175905-1176273,1176356-1176571,1177202-1177683,
1177930-1177975
Length = 1352
Score = 31.5 bits (68), Expect = 3.7
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 571 QRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQNRVPSEEEK---V 627
+R +SD+++ TD + DS SE R++K + + + ++ +D A + +EE+
Sbjct: 1170 KRRSSDSSDDTDSDEYDSGSEEENRRKKRSHRRKHRRHSSRSDSDASDYSSDDEERRSSK 1229
Query: 628 LDLKRIKKEPHHYER 642
D + HH+ R
Sbjct: 1230 KDHSSSRSHRHHHHR 1244
>10_08_0290 +
16549048-16549262,16549770-16549833,16550106-16550267,
16550786-16550956,16551041-16551235,16551421-16551546,
16551648-16551809,16551953-16552120,16552223-16552435
Length = 491
Score = 31.1 bits (67), Expect = 4.9
Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 75 DRKPEYADPSEQLKLEAEFR-RLMEQQGRDLCNDDSLKYLQHMMEVNHHYKYLKSIQERE 133
+ K E + P++ KL E R +E+ DL +L +L + + H K +S ++++
Sbjct: 325 EHKLENSIPADDQKLIEENRSNFLEKMSDDLHTTAALDHLMKLQQKLEHQKKKQSQKQQQ 384
Query: 134 SRRTTPEDTV 143
++ PED +
Sbjct: 385 QQQKKPEDYI 394
>07_03_0435 + 18182657-18183509,18184477-18184574,18184663-18184833,
18185524-18185624,18185702-18185837,18186007-18186057,
18186202-18186489,18186610-18186844,18186924-18187204,
18187336-18187557
Length = 811
Score = 31.1 bits (67), Expect = 4.9
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 982 LSKDGTYPFRGCRDNFKDLSSLKQHCETVHSQSLHRCSLPGCNS 1025
L+ G Y F+GC N + L C+ H +++ RC N+
Sbjct: 485 LTAGGAYNFKGCNSNIPSSNILMDSCKR-HLETMRRCRTDASNA 527
>06_03_1283 - 28957729-28959258,28959354-28959550,28959824-28960026,
28960097-28960424,28960524-28960661,28960765-28961020,
28961529-28961626,28963104-28963367,28964395-28964584
Length = 1067
Score = 31.1 bits (67), Expect = 4.9
Identities = 24/83 (28%), Positives = 31/83 (37%), Gaps = 2/83 (2%)
Query: 623 EEEKVLDLKRIKKEPHHYERRTEEAETSITNKTHIKQEPTIVEEEPADMTYNVQNLRVKE 682
E E+V D + PHH+ E + N TH QE +I EE +D + N K
Sbjct: 932 EVEEVKDCHA--EPPHHHNHCCHEPHDQVKNDTHPVQEHSISIEESSDHHEHHHNEEHKA 989
Query: 683 EQIERPETIKSSTPTNEHYSSEN 705
E K P S N
Sbjct: 990 EDCGHHPKPKDCAPPPTDCISRN 1012
>01_05_0474 -
22552599-22552687,22553494-22553631,22553766-22554447,
22555120-22555167,22555395-22556042,22556960-22557310,
22558622-22558690
Length = 674
Score = 31.1 bits (67), Expect = 4.9
Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 5/115 (4%)
Query: 213 KKADNEKEARKLNDVNATDRAIDLMR--SQFFNFPLQANLPCPPMAMPSAFSHPAAMVAA 270
+K E+EA+ A +A D + S+ + + LP PP P +P A+V
Sbjct: 78 QKKKREQEAQSFKRRAAPKKAKDTGKCGSRSQDAAEKPLLPAPPRRSPRLAGNPPALVDG 137
Query: 271 LSQNPMGLASLQALLPQISTKPVELPDKSVNSFSQSKPDDT---RTEEESVLNLS 322
+ + M A++P + + S N+FS + ++ R+++ +V+ LS
Sbjct: 138 VCKESMVRGKQSAIVPFRRSLRLRHNQNSQNAFSMDQNHESSSRRSQKNTVVKLS 192
>09_02_0362 +
7860088-7860197,7861606-7861636,7861738-7861801,
7861922-7862052,7863575-7863784,7863891-7863956,
7864868-7865075,7866270-7866325,7866406-7867128,
7868246-7868299,7868667-7868695,7869501-7869585,
7870032-7870202,7870246-7870827
Length = 839
Score = 30.3 bits (65), Expect = 8.5
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 253 PPMAMPSAFSHPAAMVAALSQNPMGLASLQALLPQISTKPVELPDKSV 300
PPM AFSH + +SQ GL+S+Q+ P + ++ L + SV
Sbjct: 298 PPMVSAPAFSHVTPVANGVSQ---GLSSVQSPSPSLISQETNLANDSV 342
>07_01_0463 + 3502708-3503535
Length = 275
Score = 30.3 bits (65), Expect = 8.5
Identities = 35/163 (21%), Positives = 68/163 (41%), Gaps = 12/163 (7%)
Query: 558 KSYCMEDSETDCDQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQ 617
KS +D D D+ E + KKD S + +K+K+ + G+ +
Sbjct: 87 KSDKKDDEHDDEDEEGKKKEKEMKEKKKDKSDKKEEGKKKKDGD-----EEEGKKKEKKK 141
Query: 618 NRVPSEEEKVLDLKRIKKEPHHYERRTEEAETSITNKTHIKQEPTIVEEEPADMTYNVQN 677
++ E+E + K+ K E + +E + +P ++ + + +Q+
Sbjct: 142 DKDGDEKEGKKEKKKDKDGDEEEEGKKKEKKKKDKGDKEKTNDPAKLKAKLEKIDTKIQD 201
Query: 678 LRVKEEQIER--PETIKSSTPTNEHYSSENSL--KRLESLSKG 716
L+ K+E I R E +K E S+N++ K ++L KG
Sbjct: 202 LQAKKEDILRQLKEQLKEEL---EGGKSKNAIEEKPAQTLEKG 241
>05_06_0219 + 26479708-26479710,26481045-26481173,26481675-26481818,
26481936-26482081,26482185-26482341,26482489-26482547,
26482787-26482946,26483020-26483169,26483279-26483415,
26483518-26483664,26483733-26483834,26483917-26483974,
26484084-26484185,26484322-26484379,26484717-26484775,
26486488-26486525,26486688-26486814,26486900-26487067,
26487879-26488010,26488089-26488198,26488273-26488333,
26488761-26488938,26489041-26489246,26489431-26489550,
26489631-26489729,26489968-26490156,26490291-26490430,
26491149-26491316,26491438-26491605,26491764-26491931,
26492250-26492417,26492533-26492700,26492853-26493020,
26493118-26493285,26493471-26493638,26493756-26493920,
26494679-26494850,26495012-26495175,26495296-26495405,
26495481-26495596,26495686-26495766,26495849-26496034,
26496203-26496547,26496637-26496777,26496869-26496916,
26497162-26497242,26497350-26497406,26497495-26497575,
26497675-26497757,26497842-26497968
Length = 2159
Score = 30.3 bits (65), Expect = 8.5
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 623 EEEKVLDLKRIKKEPHHYERRTEEAETSITNKT--HIKQEPTIVEEEP-ADMTYNVQNLR 679
E K ++ +++ H ERR EEA + ++ + +E ++E E A +T V+ L+
Sbjct: 954 ENSKATEISKLQTTLHEMERRVEEARATQERESAKKVVEEALVLEREKIALLTKEVEELK 1013
Query: 680 V--KEEQIERPET 690
V +EQ E+ T
Sbjct: 1014 VLLLKEQEEKNAT 1026
>05_01_0423 + 3322335-3322385,3322618-3323532,3323636-3323878
Length = 402
Score = 30.3 bits (65), Expect = 8.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 568 DCDQRSNSDNNESTDFKKDDSHSEVLKRKR 597
D D N DN+ +D+ + D E KRKR
Sbjct: 341 DDDDEENDDNDSDSDYDESDEEEEERKRKR 370
>03_05_0890 -
28547462-28547545,28548451-28548528,28548641-28548814,
28548902-28548958,28549065-28549116,28549907-28549995,
28550259-28550344,28550427-28550637,28551790-28551882,
28551958-28552098,28552175-28552267,28553879-28554113,
28554263-28554435,28555234-28556571,28556668-28556853,
28557625-28557713,28557756-28557905,28557951-28558596
Length = 1324
Score = 30.3 bits (65), Expect = 8.5
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 89 LEAEFRRLMEQQGRDLCNDDSLKYLQHMM-EVNHHYKYLKSIQERESRRTTPEDTVNVKK 147
+++ R+++ Q G D S ++ + H+ K+ +S + + + +P DT +VKK
Sbjct: 484 IQSADRQILAQPGDDTTTRGSKSDVRKSYSQEQHNLKWKRSQEIKPVKFLSPLDTTDVKK 543
Query: 148 ERISPAPNRTS 158
E SP R S
Sbjct: 544 EVESPTRERIS 554
>02_04_0001 -
18816492-18816741,18816881-18817050,18817244-18817388,
18817495-18817565,18817910-18817993,18818103-18818222,
18818310-18818480,18818955-18819044,18821893-18821985,
18822073-18822405
Length = 508
Score = 30.3 bits (65), Expect = 8.5
Identities = 16/61 (26%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 71 DKIRDRKPEYADPSEQLKLEAEFRRLMEQQGRDLCNDDSLKYL-QHMMEVNHHYKYLKSI 129
D++ D + A +E L+ +EF R E+ C ++ QH+++++++YK+LK+
Sbjct: 242 DRLLDAVRKLATRAEHLQWASEFSRRCEEMHH--CFTIVARHRSQHLVDISYNYKFLKAF 299
Query: 130 Q 130
+
Sbjct: 300 E 300
>02_03_0273 +
17173983-17174339,17174423-17174575,17174638-17174700,
17174943-17175026,17175120-17175242,17175466-17175519,
17175669-17175764,17176163-17176258,17177179-17177324,
17178503-17178632,17178697-17179272,17179364-17179462,
17179535-17179687,17179794-17180558,17181384-17181683
Length = 1064
Score = 30.3 bits (65), Expect = 8.5
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 9/108 (8%)
Query: 599 NLNPLRLQNNAGENDYLAQNRVPSEEEKVLDLKRIKKEPHHYERRTEEAETSITNKTHIK 658
NL + + + ND Q +V EKVL I++E E+ ++A I+
Sbjct: 603 NLQLVTVDGSIPSNDLKQQEQVFKAVEKVL-AGAIRREMLRDEQCAKQA-------AEIQ 654
Query: 659 QEPTIVEEEPADMTYNVQNLRVKEEQIERPET-IKSSTPTNEHYSSEN 705
Q +V++ + N +++EE+I R ET + PT E +EN
Sbjct: 655 QLKRLVQQYKHERECNAAIAQIREEKIARLETLVDGILPTEELMHAEN 702
>01_01_0484 - 3558941-3559303,3559439-3559560,3560596-3560743,
3560853-3561491,3562154-3562450,3562553-3563407,
3564363-3564545,3565041-3565118,3565762-3565974,
3566075-3566238,3566357-3566445,3566761-3566891,
3566980-3567148,3567255-3567327,3567525-3567606,
3567677-3567808,3568743-3568818,3568965-3569065,
3569446-3569636,3569738-3569912,3570604-3570854,
3571327-3571603,3572184-3572267,3572496-3573206
Length = 1867
Score = 30.3 bits (65), Expect = 8.5
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 566 ETDCDQRSNSDNNESTDFKKDDSHSEVLKRKRKNLN 601
+ DC QR++SD+N+ST F D+S L + ++LN
Sbjct: 1407 DDDCSQRNSSDSNQSTSF-SDESLVWNLSQWLRDLN 1441
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.129 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,353,697
Number of Sequences: 37544
Number of extensions: 1134572
Number of successful extensions: 2778
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 2733
Number of HSP's gapped (non-prelim): 71
length of query: 1054
length of database: 14,793,348
effective HSP length: 90
effective length of query: 964
effective length of database: 11,414,388
effective search space: 11003470032
effective search space used: 11003470032
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 65 (30.3 bits)
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