Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001410-TA|BGIBMGA001410-PA|IPR007087|Zinc finger,
C2H2-type
(1054 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 35 0.003
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 30 0.072
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 30 0.095
L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protei... 28 0.29
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 28 0.38
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 27 0.67
U77974-1|AAB36556.1| 276|Tribolium castaneum transcription fact... 27 0.89
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 26 1.6
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 26 1.6
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 25 2.1
AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 25 2.7
AY321476-1|AAQ23386.1| 253|Tribolium castaneum Ash protein. 25 3.6
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 25 3.6
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 24 4.7
DQ659254-1|ABG47452.1| 431|Tribolium castaneum imaginal disc gr... 24 6.3
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 35.1 bits (77), Expect = 0.003
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 777 SITDIPVDNDNPKKCTACGRLFQNVYVLKTHYQTAHLKLRYKCNFDGCRAAYSSRKGRDQ 836
SI + DN P C CG+ + LKTH +T + Y+C D C ++S
Sbjct: 238 SINLLEEDNQKPNVCRICGKSYARPSTLKTHLRTHSGEKPYRC-ID-CNKSFSQAANLTA 295
Query: 837 H 837
H
Sbjct: 296 H 296
Score = 29.9 bits (64), Expect = 0.095
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 786 DNPKKCTACGRLFQNVYVLKTHYQTAHLKLRYKCNFDGCRAAYSSRKGRDQH 837
+ P +C C R F + TH +T + Y+C C+ A+S +H
Sbjct: 303 EKPFRCPVCDRRFSQSSSVTTHMRTHSGERPYRCRL--CKKAFSDSSTLTKH 352
Score = 25.4 bits (53), Expect = 2.1
Identities = 16/58 (27%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Query: 983 SKDGTYPFRGCRDNFKDLSSLKQHCETVHSQSLHRCSLPGCNSAFFSRTKRNIHYESH 1040
S + Y R C+ F D S+L +H + + C L C F N H H
Sbjct: 329 SGERPYRCRLCKKAFSDSSTLTKHLRIHSGEKPYECKL--CLLRFSQSGNLNRHMRVH 384
Score = 24.2 bits (50), Expect = 4.7
Identities = 21/83 (25%), Positives = 31/83 (37%), Gaps = 5/83 (6%)
Query: 786 DNPKKCTACGRLFQNVYVLKTHYQTAHLKLRYKCNFDGCRAAYSSRKGRDQ--HSGNVTL 843
+ P +C C + F L H +T + ++C R + SS HSG
Sbjct: 275 EKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPY 334
Query: 844 HRKLSSDDFRVTDDSSKLLDKIR 866
+L F DSS L +R
Sbjct: 335 RCRLCKKAF---SDSSTLTKHLR 354
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 30.3 bits (65), Expect = 0.072
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 787 NPKKCTACGRLFQNVYVLKTHYQTAHLKLRYKCNFDGCRAAYSSRKGRDQHSG 839
+P +C C R+ L+ HY+T + +KC C A++++ H G
Sbjct: 133 DPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKI--CGRAFTTKGNLKTHMG 183
Score = 30.3 bits (65), Expect = 0.072
Identities = 39/163 (23%), Positives = 60/163 (36%), Gaps = 25/163 (15%)
Query: 364 TGKKRVQCNVCLKTFCDKGALKIQFSAVH-----LREMHKCTVEGCSMMFXXXXXXXXXX 418
TG++ +C +C + F KG LK VH +R +H+C V C F
Sbjct: 158 TGERPFKCKICGRAFTTKGNLKTHM-GVHRAKPPMRVLHQCPV--CHKKFT--------- 205
Query: 419 ANPNPKLHSPHLRRKI-SPHDGRSAQTHSVLISPHAAGLNVPPVMNHMNPFGSYTLLNPP 477
N + H+R P D Q + + + P + N +NPF P
Sbjct: 206 ---NALVLQQHIRLHTGEPTDLTPEQIQAAEVKDFPSPGGFPSIHNSINPFLGQGFAVP- 261
Query: 478 QGLRQFASNIPMDYKNSMNVGFSH--FDQSHTVRRDMNSIENK 518
GL + M++K H D DM++ EN+
Sbjct: 262 -GLSPLGHTLSMNHKYEKIDKEEHESMDDDDDDDDDMSNSENQ 303
Score = 26.6 bits (56), Expect = 0.89
Identities = 11/22 (50%), Positives = 12/22 (54%)
Query: 786 DNPKKCTACGRLFQNVYVLKTH 807
+ P KC CGR F LKTH
Sbjct: 160 ERPFKCKICGRAFTTKGNLKTH 181
Score = 26.2 bits (55), Expect = 1.2
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 549 MNGYYSNLNKSY--CMEDSETDCDQRSNSDNNESTDFKKDDSH 589
MN Y ++K M+D + D D SNS+N D H
Sbjct: 272 MNHKYEKIDKEEHESMDDDDDDDDDMSNSENQNPRFTSSPDMH 314
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 29.9 bits (64), Expect = 0.095
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 786 DNPKKCTACGRLFQNVYVLKTHYQTAHLKLRYKCNFDGCRAAYSSRKGRDQH 837
+ P +C C R F + TH +T + Y+C C+ A+S +H
Sbjct: 47 EKPFRCPVCDRRFSQSSSVTTHMRTHSGERPYRCRL--CKKAFSDSSTLTKH 96
Score = 25.4 bits (53), Expect = 2.1
Identities = 16/58 (27%), Positives = 22/58 (37%), Gaps = 2/58 (3%)
Query: 983 SKDGTYPFRGCRDNFKDLSSLKQHCETVHSQSLHRCSLPGCNSAFFSRTKRNIHYESH 1040
S + Y R C+ F D S+L +H + + C L C F N H H
Sbjct: 73 SGERPYRCRLCKKAFSDSSTLTKHLRIHSGEKPYECKL--CLLRFSQSGNLNRHMRVH 128
Score = 24.2 bits (50), Expect = 4.7
Identities = 21/83 (25%), Positives = 31/83 (37%), Gaps = 5/83 (6%)
Query: 786 DNPKKCTACGRLFQNVYVLKTHYQTAHLKLRYKCNFDGCRAAYSSRKGRDQ--HSGNVTL 843
+ P +C C + F L H +T + ++C R + SS HSG
Sbjct: 19 EKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPY 78
Query: 844 HRKLSSDDFRVTDDSSKLLDKIR 866
+L F DSS L +R
Sbjct: 79 RCRLCKKAF---SDSSTLTKHLR 98
>L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protein
protein.
Length = 46
Score = 28.3 bits (60), Expect = 0.29
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 788 PKKCTACGRLFQNVYVLKTHYQTAHLKLRYKCNFDGCRAAYS 829
P KCT C + F ++L+ H +T + + C + C A++
Sbjct: 7 PCKCTICPKAFSRPWLLQGHIRTHTGEKPFSCTY--CNRAFA 46
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 27.9 bits (59), Expect = 0.38
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 791 CTACGRLFQNVYVLKTHY-QTAHLK--LRYKCNFDGCRAAYSSRKGRDQHSGNVTLHRKL 847
C C + F ++ L H + +H K + G R + K + L +
Sbjct: 550 CKVCDQAFSSLKELSNHMVKNSHYKEHIMRSITESGGRRRQTREKRKKSLPVRKLLELER 609
Query: 848 SSDDFRVTDDSSKLLDKIRD 867
+ +F+ DSS LLDK+RD
Sbjct: 610 AQHEFK-NGDSSSLLDKMRD 628
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 27.1 bits (57), Expect = 0.67
Identities = 8/35 (22%), Positives = 15/35 (42%)
Query: 1010 VHSQSLHRCSLPGCNSAFFSRTKRNIHYESHVSRR 1044
+ +++H C +PGC + + H H R
Sbjct: 309 LRKKNIHSCHIPGCGKVYGKTSHLKAHLRWHTGER 343
>U77974-1|AAB36556.1| 276|Tribolium castaneum transcription factor
homolog protein.
Length = 276
Score = 26.6 bits (56), Expect = 0.89
Identities = 19/38 (50%), Positives = 21/38 (55%), Gaps = 6/38 (15%)
Query: 332 QNPRNVLLGPPKRQWGATQMPLNLGTHFINPATGKKRV 369
QNP + L PP Q TQ+PLNLG F P GK V
Sbjct: 192 QNP-GLNLNPPVTQ---TQLPLNLGLDF--PYQGKFEV 223
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 25.8 bits (54), Expect = 1.6
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 603 LRLQNNAGENDYLAQNR-VPSEEEKVLDLKR-IKKEPHHYERRTEEAETSITNKTHIKQE 660
L L+ N YL + R + L K + K PH E+R ++ + + +H+
Sbjct: 233 LELEKEFHFNRYLTRRRRIEIAHALCLTNKNLVSKPPHEVEKRAQDGQYEYRSLSHVSLR 292
Query: 661 PTI 663
P +
Sbjct: 293 PPL 295
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 25.8 bits (54), Expect = 1.6
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 786 DNPKKCTACGRLFQNVYVLKTHYQTAHLKLRYKC 819
D P C C R F +VL+ H +T + ++C
Sbjct: 132 DRPFTCEVCNRSFGYKHVLQNHERTHTGEKPFEC 165
Score = 24.2 bits (50), Expect = 4.7
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 786 DNPKKCTACGRLFQNVYVLKTHYQTAHLKLRYKC 819
+ P +C C + F + LKTH + + Y+C
Sbjct: 160 EKPFECQECHKRFTRDHHLKTHMRLHTGERPYRC 193
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 25.4 bits (53), Expect = 2.1
Identities = 24/89 (26%), Positives = 34/89 (38%), Gaps = 7/89 (7%)
Query: 138 TPEDTVNVKKERISPAPNRTSPRESRSPAQKVSSAEVSPSHXXXXXXXXX---XXXXXXQ 194
TP + + +P P TS S SPA S+A +P H Q
Sbjct: 20 TPISSSGMTSPAAAPPPATTS---SGSPASVASNAS-APLHIPAKRAAYDCEGVIRHHGQ 75
Query: 195 MNTSPLNHLQNMQPYDFRKKADNEKEARK 223
N SP NH + + AD +++RK
Sbjct: 76 WNYSPDNHFEQYPNPTYYNLADPARDSRK 104
>AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle
nuclear receptor protein.
Length = 407
Score = 25.0 bits (52), Expect = 2.7
Identities = 10/40 (25%), Positives = 19/40 (47%)
Query: 68 EAHDKIRDRKPEYADPSEQLKLEAEFRRLMEQQGRDLCND 107
E + +DR + + L+ + R++E + R CND
Sbjct: 158 EERQRTKDRDTSEVESTSNLQADMPLERIIEAEKRVECND 197
>AY321476-1|AAQ23386.1| 253|Tribolium castaneum Ash protein.
Length = 253
Score = 24.6 bits (51), Expect = 3.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 137 TTPEDTVNVKKERISPAPNRTS 158
T P TV K ++PAP RTS
Sbjct: 37 TQPTKTVIQSKRPLAPAPERTS 58
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 24.6 bits (51), Expect = 3.6
Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Query: 253 PPMA-MPSAFSHPAAMVAALSQNPMGLASLQALLPQISTKPVELPDKSVNSFSQSKPDDT 311
PP+ P SHP +++ +PM S P +L S+N +S D
Sbjct: 115 PPLTPSPGPPSHPYTVISNGYSSPMSSGSYDPYSPNGKIGREDLSPSSLNGYSADSCDSK 174
Query: 312 R 312
+
Sbjct: 175 K 175
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 24.2 bits (50), Expect = 4.7
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 786 DNPKKCTACGRLFQNVYVLKTHYQTAHLKLRYKC 819
+ P +C C + F + LKTH + + Y+C
Sbjct: 7 EKPFECQECHKRFTRDHHLKTHMRLHTGERPYRC 40
>DQ659254-1|ABG47452.1| 431|Tribolium castaneum imaginal disc
growth factor 4 protein.
Length = 431
Score = 23.8 bits (49), Expect = 6.3
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 101 GRDLCNDDSLKYLQHMMEVNHHYKYLKSIQ 130
G D+ +D ++KY + V+H ++ S Q
Sbjct: 103 GEDIGDDGNIKYRTILESVDHRLAFVNSAQ 132
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.314 0.129 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,132
Number of Sequences: 317
Number of extensions: 9778
Number of successful extensions: 46
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 33
length of query: 1054
length of database: 114,650
effective HSP length: 64
effective length of query: 990
effective length of database: 94,362
effective search space: 93418380
effective search space used: 93418380
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 48 (23.4 bits)
- SilkBase 1999-2023 -