Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001410-TA|BGIBMGA001410-PA|IPR007087|Zinc finger,
C2H2-type
(1054 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 40 0.001
SPAC23D3.03c |||GTPase activating protein |Schizosaccharomyces p... 38 0.010
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 36 0.022
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 36 0.022
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 35 0.069
SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 34 0.091
SPCC1919.07 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 34 0.12
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 33 0.21
SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pom... 32 0.48
SPAC24C9.05c |mug70||conserved protein |Schizosaccharomyces pomb... 32 0.48
SPBP8B7.10c |||U3 snoRNP-associated protein Utp16 |Schizosacchar... 31 0.64
SPBC365.13c |hba1|caf1|Ran GTPase binding protein Hba1|Schizosac... 31 0.84
SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like |Schizosacch... 31 0.84
SPAC6B12.11 |drc1|sld1|DNA replication protein Drc1|Schizosaccha... 31 1.1
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 30 1.5
SPBC776.16 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 30 1.5
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 30 1.9
SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein Usp104|Schi... 30 1.9
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 29 2.6
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 29 2.6
SPAC8C9.10c |||ribosome biogenesis protein Rrp14-N|Schizosacchar... 29 3.4
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 29 3.4
SPAC19B12.05c |fcp1||CTD phosphatase Fcp1 |Schizosaccharomyces p... 29 4.5
SPAPB8E5.07c |||ribosome biogenesis protein Rrp12|Schizosaccharo... 29 4.5
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 29 4.5
SPBC18H10.07 |||WW domain-binding protein 4 |Schizosaccharomyces... 29 4.5
SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3 |Schizosacch... 29 4.5
SPCC790.02 |pep3|vps18, vps18|ubiquitin-protein ligase E3 |Schiz... 28 6.0
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 28 7.9
SPBC56F2.06 |mug147||sequence orphan|Schizosaccharomyces pombe|c... 28 7.9
>SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 956
Score = 40.3 bits (90), Expect = 0.001
Identities = 36/161 (22%), Positives = 76/161 (47%), Gaps = 16/161 (9%)
Query: 571 QRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQNRV---PSEEEKV 627
Q+ ++ ++ ST+ + H + R+ ++P+ QNN + + N++ P+ ++++
Sbjct: 370 QKPSNFHSSSTELSDNSIH-----QGRRAVDPVVNQNNPSNFEEMIMNKLNKLPTIDKQI 424
Query: 628 LDLKRIKKEPHHYERRTEEAETSITNKTHIKQEPTIVEEEPADMTYNVQNLRVKEEQIER 687
L + H++ +T E SI NK++ KQ P + P T N L +EE + R
Sbjct: 425 LGTSSLT----HFQDKTTAIEHSI-NKSNSKQPPRFKFQLPPRPTSNTLPLEPEEELVTR 479
Query: 688 PETIKSSTPTNEHYSSENSLKRLESLSKGEFPEIPKKNDIN 728
+E + ++ +L ++ EF E+ ND++
Sbjct: 480 YSVSSDGNTVDEAITKQSQTFQL--VNSNEFNEV-NANDVH 517
>SPAC23D3.03c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 472
Score = 37.5 bits (83), Expect = 0.010
Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 7/135 (5%)
Query: 10 ELPSQTETQSTSAERWSGHGPEHSMALQQILKLQEARALHKTSLLP-IYKKNGLASTPNE 68
ELPS + Q T+AE +S P+ + Q+ +QE+ T LP G AS +
Sbjct: 70 ELPSTSNAQKTAAESFSKLSPQDQLLSLQLNNVQESVFQQSTFNLPDALLDPGPASKEKQ 129
Query: 69 AHDKIRDRKPEYADPSEQLKLEAEFRRLMEQQGRDLCNDDSLKYLQHMMEVNHHYK---Y 125
A I +P + P + + E + R EQ + D K + + V K Y
Sbjct: 130 AVLSI--GRPSWLPPKSK-EEEKKHMREFEQIKKSAMRYDRQKQKEKIKMVEQKNKRNLY 186
Query: 126 LKSIQERESRRTTPE 140
L ++ ERE R P+
Sbjct: 187 LVNVWEREILRNWPD 201
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 36.3 bits (80), Expect = 0.022
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 989 PFRGCRDNFKDLSSLKQHCETVHSQSLHRCSLPGCNSAFFSRTKRNIHYESHVS 1042
P+ C + S L+QH T ++ C GC+ AF+ ++ IH H +
Sbjct: 26 PYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTN 79
Score = 35.5 bits (78), Expect = 0.039
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 785 NDNPKKC--TACGRLFQNVYVLKTHYQTAHLKLR-YKCNFDGCRAAYSSRKGRDQHSGNV 841
N+ P C T C + F LK H + H ++ + C++DGC A + +++ ++H +
Sbjct: 49 NERPFVCDYTGCSKAFYRKSHLKIH-KRCHTNVKPFSCHYDGCDAQFYTQQHLERH---I 104
Query: 842 TLHRK 846
+HRK
Sbjct: 105 EVHRK 109
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 9/63 (14%)
Query: 791 CTACGRLFQNVYVLKTH---YQTA-HLKLRYKCNFDGCRAAYSSRKGRDQ-----HSGNV 841
C+ CGR F+ L+ H +QT + Y C +GC+ +++ + H GN+
Sbjct: 206 CSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNM 265
Query: 842 TLH 844
H
Sbjct: 266 AFH 268
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 989 PFRGCRDNFKDLSSLKQHCETVHSQSL-HRCSLPGCNSAFFSRTKRNI 1035
P GC+ +F S+LK+H +H ++ C G + +R++
Sbjct: 239 PMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHL 286
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/51 (27%), Positives = 21/51 (41%)
Query: 990 FRGCRDNFKDLSSLKQHCETVHSQSLHRCSLPGCNSAFFSRTKRNIHYESH 1040
+ GC F S LK H + C GC++ F+++ H E H
Sbjct: 57 YTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIEVH 107
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 36.3 bits (80), Expect = 0.022
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 565 SETDCDQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQNRVPSEE 624
+E+D + S +++ D + DS + L+ +LN R ++ A L+ + S E
Sbjct: 200 NESDSESEIESSDSDHDDGENSDSKLDNLRNYIVSLNQKRKKDEADAESVLSSDDNDSIE 259
Query: 625 EKVLDLKRIKKEPHHYERRTEEAETSITNKT 655
E + +K++K +PH + +E + KT
Sbjct: 260 E--ISIKKVKYDPHETNKESEYNLIGSSEKT 288
Score = 29.1 bits (62), Expect = 3.4
Identities = 36/147 (24%), Positives = 68/147 (46%), Gaps = 9/147 (6%)
Query: 575 SDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAG--ENDYLAQNRVPSEE--EKVLDL 630
S+N ++ F + +E ++ + L L+N + + + LA N++ EE E+ L
Sbjct: 377 SNNGLASSF---EPRTESERKMHQALLDAGLENESALKKQEELALNKLSVEEVAERTRQL 433
Query: 631 KRIKKEPHHYERRTEEAETSITNKTHIKQEPTIVEEEPADMTYNVQNLRVKEEQIERPET 690
R +E E R + I +KT+ K E+E A + + ++L + + E
Sbjct: 434 -RFMRELMFREERKAKRVAKIKSKTYRKIRKNRKEKEMALIPKSEEDLENERIKSEEARA 492
Query: 691 IKSSTPTNEHYSSENSLKRLESLSKGE 717
++ T +++ SS + K LE S GE
Sbjct: 493 LERMTQRHKNTSSW-TRKMLERASHGE 518
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 34.7 bits (76), Expect = 0.069
Identities = 24/135 (17%), Positives = 68/135 (50%), Gaps = 3/135 (2%)
Query: 566 ETDCDQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQNRVPSEEE 625
+T+ + S+S+++ S++ ++++ ++ K+++ + ++++ E++ + + EEE
Sbjct: 129 KTEEKKESSSESSSSSESEEEEEAVVKIEEKKESSSDSSSESSSSESESESSSSESEEEE 188
Query: 626 KVLDLKRIKKEPHHYERRTEEAETSITNKTHIKQEPTIVEEEPADMTYNVQNLRVKEEQI 685
+V++ KKE + ++E+S + + + + E + + + + +
Sbjct: 189 EVVEKTEEKKEGS--SESSSDSESSSDSSSESGDSDSSSDSESESSSEDEKKRKAEPASE 246
Query: 686 ERPETI-KSSTPTNE 699
ERP I K S +NE
Sbjct: 247 ERPAKITKPSQDSNE 261
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Query: 625 EKVLDLKRIKKEPHHYERRTEEAETSITNKTHIKQEPTIVEEEPADMTYNVQNLRVKEEQ 684
EK K+I KE E + ++T ++ K K+ EP+ + Q K+E+
Sbjct: 24 EKPSKSKKITKEAAK-EIAKQSSKTDVSPKKSKKEAKRASSPEPSKKSVKKQKKSKKKEE 82
Query: 685 IERPETIKSSTPTNEHYSSENSLKRLESLS 714
+SS+ +E SSE+ ES S
Sbjct: 83 SSSESESESSSSESESSSSESESSSSESES 112
>SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1038
Score = 34.3 bits (75), Expect = 0.091
Identities = 41/174 (23%), Positives = 71/174 (40%), Gaps = 7/174 (4%)
Query: 554 SNLNKSYCMEDSETDCDQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGEND 613
SNL+ S + D ++ D + D+ D + + + K ++A E D
Sbjct: 305 SNLSSS--LNDKKSPNDDHAVLDSELMEQTLPDSAEAVEIANNVKEDIVSTANDDANELD 362
Query: 614 YLAQNRVPSEEEKVLDLKRIKKEPHHYERRTEEAETSITNKTHIKQEPTIVEEEPA-DMT 672
++ K + + I E + EE +T++T T +K I+ + A +T
Sbjct: 363 NTSEKATLETSSKPVTEQAI--EQSEVVQEVEEGDTNMTTNTILKPTDEIINKGYAYSIT 420
Query: 673 YNVQN-LRVKEEQIERPETIKSSTPTNEHYSSENSLKRLESLSKGEFPEIPKKN 725
+ N K EQI P+ S T + H + K +SLS F E P++N
Sbjct: 421 SSHSNHSNEKFEQIPSPDEKLSRTDIDTHVKQLQTTKSTDSLSI-PFVESPQQN 473
>SPCC1919.07 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 206
Score = 33.9 bits (74), Expect = 0.12
Identities = 41/157 (26%), Positives = 67/157 (42%), Gaps = 15/157 (9%)
Query: 584 KKDDSHSEVLKRKRKNL--NPLRLQNNAGENDYLAQNRVPSEEEKVLDLKRI-------- 633
KK D H +K ++KNL N R +N AGE Y ++ E + LK +
Sbjct: 17 KKHDIHDAPVKPRKKNLGNNEWRFKN-AGE--YFDEDNNEEEYPSLESLKTVGNGDTIQD 73
Query: 634 KKEPHHYERRTEEAETS--ITNKTHIKQEPTIVEEEPADMTYNVQNLRVKEEQIERPETI 691
++E Y + T I+N+ + TI EE ADM +V++ + +E +R
Sbjct: 74 EEEDFEYSKLQARPLTGLGISNQKPKSKVRTIQREEVADMLESVEHEKSIQEFRKRYNVQ 133
Query: 692 KSSTPTNEHYSSENSLKRLESLSKGEFPEIPKKNDIN 728
K + + E+ LES+ + P I + N
Sbjct: 134 KPKVNISHAEAEEDIDSFLESMDQSAPPSITEDKGEN 170
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 33.1 bits (72), Expect = 0.21
Identities = 28/133 (21%), Positives = 57/133 (42%), Gaps = 5/133 (3%)
Query: 594 KRKRKNLNPLRLQNNAGENDYLAQNRVPSEEEKVLDLKRIKKEPHHYERRTEEAETSITN 653
K+KRKN + +NN ++ N + + +D K +K + E A ++++
Sbjct: 38 KKKRKNRK--KKKNNGPSEQFVGNNDLEEQRSGSIDSKDKEKPLDEKVKELENANKTLSD 95
Query: 654 KTHIKQEPTIVEEEPADMTYNVQNLRVKEEQIERPETIKSSTPTNEHYSSENSLKRLESL 713
Q E+ A++ YN L K+E ++ + ++ S T EN + L+ +
Sbjct: 96 LVRRIQIQRDEAEQKAEI-YNRDALNTKQEHLDIKKRLEKSDETVCKLKEEN--ENLQDM 152
Query: 714 SKGEFPEIPKKND 726
+ E+ + D
Sbjct: 153 LRNVGNELVESRD 165
>SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 649
Score = 31.9 bits (69), Expect = 0.48
Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 621 PSEEEKVLDLKRIKKEPHHYERRTEEAETSITNKTHIKQEPTIVEEEPADMTYNVQ---- 676
P EE +L+ K ++ ++ E+ ++I + ++QE + EEE Q
Sbjct: 288 PVEETAILNRKPTLRKKKSIPKKQNESSSTIQKENTVQQEASSSEEEAVKSLPETQRTTS 347
Query: 677 NLRVKEEQIERPETIKSSTPTNE---HYSSENSLK 708
+ +EE+I+ E E +Y SEN L+
Sbjct: 348 RIETQEEEIKEEEMEGEEEEEEEEVPNYESENELE 382
>SPAC24C9.05c |mug70||conserved protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 730
Score = 31.9 bits (69), Expect = 0.48
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 272 SQNPMGLASLQALLPQISTKPVELPDKSVNSFSQS 306
S NP S Q+ P +S KP++ P+ NSF+ S
Sbjct: 483 SNNPPTAMSEQSFHPSVSQKPMDTPENGSNSFAAS 517
>SPBP8B7.10c |||U3 snoRNP-associated protein Utp16
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 346
Score = 31.5 bits (68), Expect = 0.64
Identities = 37/170 (21%), Positives = 69/170 (40%), Gaps = 6/170 (3%)
Query: 553 YSNLNKSYCMEDSETDCDQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGEN 612
+SNLNK + +E + ++ S+ N+S+D D++ EV + + RLQ G N
Sbjct: 133 FSNLNKPNDLLKAEIEDNEASHYSQNQSSDSDSDEAPEEVSLKSSSDEVKKRLQRLKG-N 191
Query: 613 DYLAQNRVPSEEEKVLDLKRIK-KEPHHYERRTEEAETSITNKTHIKQEPTIVEEEPADM 671
+ + S VL L + ++ +RR + N + + A
Sbjct: 192 ELHSTAHFVSLLLIVLFLTHFRLRKAEREKRRLQNERNRERNAQRVSASKLDLAILEAAE 251
Query: 672 TYNVQNLRVKEEQIERPETIKSSTPTNEHY---SSENSLKRLESLSKGEF 718
+ + EE+++ ++ TP ++E KR S KG+F
Sbjct: 252 VEEINSTTEIEEKVDE-ASLDLYTPKGHKIVFPNNEIPKKRTRSFRKGDF 300
>SPBC365.13c |hba1|caf1|Ran GTPase binding protein
Hba1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 399
Score = 31.1 bits (67), Expect = 0.84
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 5/118 (4%)
Query: 601 NPLRLQNNAGENDYLAQNRVPSEEEKVLDLKRIKKEPHHYERRTEEAETSITNKTH-IKQ 659
N L ++N +++ + P+EEE + K K EP + E E T K++ +K
Sbjct: 17 NALEEKSNETKDETSKRKHDPAEEESAVSTKVSKSEPLEDKGNAEVKEFKETTKSNGVKP 76
Query: 660 EPTIVEEEPADMTYNVQNLRVKEEQIERPE-TIKSSTPTNE-HYSSENSLKRLESLSK 715
E I E N + ++E E + NE H + E K ES +K
Sbjct: 77 EVEITESTKIQKESNTEPCISTGGKVEEKELKVNKDVDENEGHVAVETGKK--ESAAK 132
>SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1030
Score = 31.1 bits (67), Expect = 0.84
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 554 SNLNKSYCMEDSETDCDQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGEND 613
SN + D+ET D++S+ N+E ++ S S V K K N L+L + E+
Sbjct: 21 SNDELKVLLRDTETKEDEKSSFSNSEEESIIENLSDSSVNKEYAK--NSLKLSDAVSESK 78
Query: 614 YL 615
YL
Sbjct: 79 YL 80
>SPAC6B12.11 |drc1|sld1|DNA replication protein
Drc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 337
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 555 NLNKSYCMEDSETDCDQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLR 604
NL+KS+ E D D + D+NE T KD S L+ +R+N +R
Sbjct: 260 NLSKSHLEGLPEIDEDAENGIDDNEDTTASKDSSPFLDLQSERQNKKIMR 309
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 30.3 bits (65), Expect = 1.5
Identities = 29/142 (20%), Positives = 59/142 (41%), Gaps = 6/142 (4%)
Query: 563 EDSETDCDQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQNRVPS 622
E S D D S+S ++ES KD S + + ++ E++ +++ +
Sbjct: 246 ESSSEDSDSSSSSSDSESESSSKDSDSS---SNSSDSEDDSSSDSSDSESESSSEDSDST 302
Query: 623 EEEKVLDLKRIKKEPHHYERRTEEAETSITNKTH--IKQEPTIVEEEPADMTYNVQNLRV 680
D ++ + T E S + T+ +E T V++E + ++ ++L+
Sbjct: 303 SSSSDSDSSSSSEDGNSNTDTTTSGEVSAQSSTNSTSSEESTSVKDEDSSKIHD-KSLKR 361
Query: 681 KEEQIERPETIKSSTPTNEHYS 702
K E E + KSS T ++
Sbjct: 362 KHEDDESSTSTKSSRTTKTPFT 383
>SPBC776.16 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 253
Score = 30.3 bits (65), Expect = 1.5
Identities = 38/156 (24%), Positives = 60/156 (38%), Gaps = 14/156 (8%)
Query: 591 EVLKRKRKNLNPLRLQNNAGENDYLAQNRVPSEE-EKVLDLKRIKKEPHH--------YE 641
E LK + N L QNN DYL ++ + S K K P H Y+
Sbjct: 76 ECLKYNLSDNNKLLSQNNYRLPDYLEEDEIVSYTFSKTGPTTSKNKHPSHSNTIRSPPYK 135
Query: 642 RRTEEAETSITNKTHIKQEP-TIVEEEPADMTY-NVQNLRVKEEQ--IERPETIKSSTPT 697
+ E T I N +++ E +++ Y +V +L V + + I E+ +
Sbjct: 136 VKKESCHTEINNVSNVSTESINVIDASRGYSPYTSVDSLSVSKNRSFISLEESASNQYDA 195
Query: 698 NE-HYSSENSLKRLESLSKGEFPEIPKKNDINALGP 732
E Y + +S L LS E P P + + P
Sbjct: 196 AEAFYFNADSSSPLRKLSPIELPVTPIRRKTPTINP 231
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 29.9 bits (64), Expect = 1.9
Identities = 29/140 (20%), Positives = 58/140 (41%), Gaps = 5/140 (3%)
Query: 28 HGPEHSMALQQILKLQEARALHKTSLLPIYKKNGLASTPNEAHDKIRDRKPEYADPSEQL 87
H PE + + L+L+ R L + S P K + PN+ + + +D S++
Sbjct: 53 HAPEKYIEFLE-LRLKYLRGLAEESD-PNLKLPSFLAPPNDKDSPVNQSPWKRSDSSKRS 110
Query: 88 KLEAEFRRLMEQQGRDLCNDDSLKYLQHMMEVNHHYKYLKSIQERESRRTTPEDTVNVKK 147
+ EF L ++ G+ DD + + + ++K+I + +R +T + V
Sbjct: 111 SSQDEFESLFDRYGQLSLKDDGKADFRGS---SSGFVFMKNIHQNIARNSTVPNPVQESN 167
Query: 148 ERISPAPNRTSPRESRSPAQ 167
S + P +PA+
Sbjct: 168 SSSSQPDPLSFPYLPPTPAE 187
>SPAC4D7.13 |usp104|prp40|U1 snRNP-associated protein
Usp104|Schizosaccharomyces pombe|chr 1|||Manual
Length = 695
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/41 (29%), Positives = 24/41 (58%)
Query: 623 EEEKVLDLKRIKKEPHHYERRTEEAETSITNKTHIKQEPTI 663
E E +LD ++ KKE H ER+ +A ++ ++++ T+
Sbjct: 387 EREYILDKQKQKKEKHRIERKNRDAFRALLQDLRVQKKITL 427
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 29.5 bits (63), Expect = 2.6
Identities = 34/144 (23%), Positives = 56/144 (38%), Gaps = 14/144 (9%)
Query: 554 SNLNKSYCMEDSETDCDQRSNSDNNES---TDFKKDDSHSEVLKRKRKNLNPLRLQNN-- 608
S NK + S TD S S NES + ++ V K + R+ N
Sbjct: 13 STSNKGNELCSSSTDITSLSVSSPNESVIHSSHSASEADEYVCKLSYEGNRKKRIYNGSA 72
Query: 609 -AGENDYLAQNRVPSEEEKVLDLKRIKKEPHHYERRTEE--------AETSITNKTHIKQ 659
AG+ L + R E + + +R+K+E +R E+ A + +++
Sbjct: 73 EAGKEKKLQKQRAQEERIRQKEAERLKREKERQQREQEKKLREQEKIAAKKMKELEKLEK 132
Query: 660 EPTIVEEEPADMTYNVQNLRVKEE 683
E ++E+ Q LR KEE
Sbjct: 133 ERIRLQEQQRRKEERDQKLREKEE 156
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/112 (20%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Query: 574 NSDNNESTDFKKDDSHSEVLKRKR-KNLNPLRLQNNAGENDYLAQNR---VPSEEEKVLD 629
N N+E F++DD +S L+ K + + + + + + A + + EEK+ +
Sbjct: 739 NVGNSEKVTFQEDDINSPKLQSKNNQTVEAVNTETSDKLQEKEANHELENIEKIEEKLTE 798
Query: 630 LKRIKKEPHHYERRTEEAETSITNKTHIKQEPTIVEEEPADMTYNVQNLRVK 681
+ ++ ++ + + TS+ N T + T +E D NV V+
Sbjct: 799 VDKVSLSDAFPDQEIKNSRTSVQNGTRSVSKNTPEKETKVDKIDNVSKKDVE 850
>SPAC8C9.10c |||ribosome biogenesis protein
Rrp14-N|Schizosaccharomyces pombe|chr 1|||Manual
Length = 154
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 563 EDSETDCDQRSNSDNNESTDF--KKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQNRV 620
+DS+ +S ++ TD + +S S++ + + LR + AG+ + QN+
Sbjct: 65 DDSQKSSKWEQSSTMSDDTDVSDRHAESMSQIRGKLASKIQDLREKRKAGDLNQKRQNKR 124
Query: 621 PSEEEK 626
P E EK
Sbjct: 125 PVENEK 130
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/55 (25%), Positives = 22/55 (40%)
Query: 784 DNDNPKKCTACGRLFQNVYVLKTHYQTAHLKLRYKCNFDGCRAAYSSRKGRDQHS 838
D P KC C + F + H +T + + C F GC +S +H+
Sbjct: 21 DAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHA 75
>SPAC19B12.05c |fcp1||CTD phosphatase Fcp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 723
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 612 NDYLAQNRVPSEEEKVLDLKRIKKEPHHYERRTEEAETS----ITNKTHIKQEPTIVEEE 667
+++LA++ E+E+++ L+ K EP + EE E + +N ++ + TI E+
Sbjct: 326 SNFLAKSTPLPEQEQLIPLEIPKDEPDSVDEINEENEETPEYDSSNSSYAQDSSTIPEKT 385
Query: 668 PADMTYNVQNLRVKEEQ 684
T+ +QN EEQ
Sbjct: 386 LLKDTF-LQNREALEEQ 401
>SPAPB8E5.07c |||ribosome biogenesis protein Rrp12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1163
Score = 28.7 bits (61), Expect = 4.5
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 7/109 (6%)
Query: 42 LQEARALHKTSLLPIYKKNGLASTPNEAHDKIRDRKPEYADPSEQLKLEAEFRRLMEQQG 101
+QE LL I + ++ST + K+ RK + + K E R L+
Sbjct: 1027 VQEDNDEEPLDLLDIEAVSKISST--DPRKKLAARKQKL---NSAFKSNEEGRLLINDSD 1081
Query: 102 RDLCNDDSLKYLQHMMEVNHHYKYLKSIQERESRRTTPEDTVNVKKERI 150
D +DSL Q EVN YL+++ +ES R + V +R+
Sbjct: 1082 EDELIEDSLANAQQHAEVNR--TYLEAVAGKESFRRGLNNRVKFSNKRV 1128
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 790 KCTACGRLFQNVYVLKTHYQTAHLKLRYKCNFDGCRAAYSSRKGRDQH 837
+CT C + F LK H + + + C++ GC A++ R +H
Sbjct: 469 RCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRH 516
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/48 (31%), Positives = 18/48 (37%)
Query: 993 CRDNFKDLSSLKQHCETVHSQSLHRCSLPGCNSAFFSRTKRNIHYESH 1040
C F SSLK H + + C GC AF R+ H H
Sbjct: 473 CLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
>SPBC18H10.07 |||WW domain-binding protein 4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 224
Score = 28.7 bits (61), Expect = 4.5
Identities = 43/187 (22%), Positives = 75/187 (40%), Gaps = 18/187 (9%)
Query: 549 MNGYYSNLNKSYC----MEDSETDCDQRSNSDNNESTD-FKK--DDSHSEVLKRKR--KN 599
M Y+ ++ K YC + +T +RS+ + D KK DD H L R+ KN
Sbjct: 1 MADYWKSIPKYYCKYCQIFVKDTPFARRSHEQTYKHQDAIKKVMDDIHRSNLLRQELEKN 60
Query: 600 LN---PLRLQNNAGENDYLAQNRVPSEEEKVLDLKRIKKEPHHYERRTEEAETSITNKTH 656
L+ + + LA P +E L + K ++ T ET + TH
Sbjct: 61 LSIPKSATATTASAVSSELASYEKPKKEHPKLRPSKKKATLDDWDIPTSSTETDTISTTH 120
Query: 657 IKQEPTIV----EEEPADMTYNVQNLRVKEEQIER-PETIKSSTPTNEHYS-SENSLKRL 710
PT++ E E T +N + ++R E I+ ++ H+ +L ++
Sbjct: 121 TSYIPTLLAKQEENEETKETTTNKNESLPGTSLKRNREIIEKEERSSFHFRVKPKNLDKV 180
Query: 711 ESLSKGE 717
L++ E
Sbjct: 181 PKLAENE 187
>SPBC887.03c |noc3||Noc2p-Noc3p complex subunit Noc3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 747
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/113 (20%), Positives = 47/113 (41%), Gaps = 3/113 (2%)
Query: 575 SDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQNRVPSEEEKVLDLKRIK 634
++N S + + ++ K+ K P + L +R+ S+EE VLD +
Sbjct: 73 NENPSSLKYLSSINPEDLGKKVEKGPRPDIYDLKKSQQFELDTSRLSSDEESVLDYSKDS 132
Query: 635 KEPHHYERRTEEAET---SITNKTHIKQEPTIVEEEPADMTYNVQNLRVKEEQ 684
++ YE R + + N+ IK + +++ AD+ + L E +
Sbjct: 133 EDEQDYELRPRVSSSWNNESYNRLPIKTKDGLLQNVVADVNNGEEFLSESESE 185
>SPCC790.02 |pep3|vps18, vps18|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 900
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 665 EEEPADMTYNVQNLRVKEEQIERPETIKSSTPTNEHY--SSENSLKRLESLSKG 716
+E + YN+ N KEEQ+ + T+ HY EN K LE+L++G
Sbjct: 519 DEINREAAYNLANNYGKEEQLLQIATVMKDQSYIMHYWVQRENYEKALETLNEG 572
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 27.9 bits (59), Expect = 7.9
Identities = 8/23 (34%), Positives = 16/23 (69%)
Query: 815 LRYKCNFDGCRAAYSSRKGRDQH 837
+RYKC+F GC +++ ++ +H
Sbjct: 15 IRYKCDFQGCTKSFTRKEHARRH 37
>SPBC56F2.06 |mug147||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 411
Score = 27.9 bits (59), Expect = 7.9
Identities = 23/104 (22%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 611 ENDYLAQNRVPSEEEKVLDLKRIKKEPHHYERRTEEAETSITNKTHIKQEPTIVEEEPAD 670
++D A +R+ + EK+L + +P+HY ++++ S K I++ + A+
Sbjct: 272 KSDIQASDRLNALNEKLLQGIQQSHQPYHY-TNVKDSQGSHQTKVTIEENMEAPSHQAAN 330
Query: 671 MTYNVQN-LRVKEEQIERPETIKSSTPTNEHYSSENSLKRLESL 713
T + L + E++ ++ S P + +SE S+ SL
Sbjct: 331 RTTLTDSPLGIVEDETTILTDLEPSGPGLQKRASETSMSTNVSL 374
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.129 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,666,767
Number of Sequences: 5004
Number of extensions: 197097
Number of successful extensions: 666
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 627
Number of HSP's gapped (non-prelim): 58
length of query: 1054
length of database: 2,362,478
effective HSP length: 80
effective length of query: 974
effective length of database: 1,962,158
effective search space: 1911141892
effective search space used: 1911141892
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 59 (27.9 bits)
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