Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001410-TA|BGIBMGA001410-PA|IPR007087|Zinc finger,
C2H2-type
(1054 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g22795.1 68415.m02704 expressed protein 42 0.002
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 40 0.009
At5g40450.1 68418.m04905 expressed protein 38 0.027
At3g28770.1 68416.m03591 expressed protein 38 0.027
At5g41020.1 68418.m04986 myb family transcription factor contain... 38 0.035
At3g19050.1 68416.m02420 kinesin motor protein-related contains ... 38 0.035
At5g55780.1 68418.m06952 DC1 domain-containing protein contains ... 37 0.062
At5g54410.1 68418.m06777 hypothetical protein 37 0.081
At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar... 37 0.081
At5g40520.1 68418.m04916 expressed protein 36 0.11
At3g42690.1 68416.m04439 Ulp1 protease family protein contains P... 36 0.19
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 36 0.19
At5g24880.1 68418.m02946 expressed protein ; expression supporte... 35 0.25
At5g01840.1 68418.m00103 ovate family protein 59% similar to ova... 35 0.25
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 35 0.25
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 35 0.33
At2g04970.1 68415.m00518 hypothetical protein similar to At2g152... 34 0.43
At1g72650.2 68414.m08402 myb family transcription factor contain... 34 0.43
At1g27170.1 68414.m03310 disease resistance protein (TIR-NBS-LRR... 34 0.43
At1g22670.1 68414.m02833 protease-associated zinc finger (C3HC4-... 34 0.43
At4g36105.1 68417.m05139 expressed protein 34 0.57
At5g40530.2 68418.m04918 expressed protein contains Pfam profile... 33 1.0
At5g40530.1 68418.m04919 expressed protein contains Pfam profile... 33 1.0
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 33 1.0
At2g32310.1 68415.m03950 expressed protein 33 1.0
At1g30640.1 68414.m03747 protein kinase, putative contains prote... 33 1.0
At1g04445.1 68414.m00436 zinc finger (C2H2 type) family protein ... 33 1.0
At5g27120.1 68418.m03237 SAR DNA-binding protein, putative stron... 33 1.3
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 33 1.3
At1g56660.1 68414.m06516 expressed protein 33 1.3
At1g26540.1 68414.m03234 agenet domain-containing protein contai... 33 1.3
At5g10950.1 68418.m01271 cylicin-related low similarity to SP|Q2... 32 1.8
At3g10680.1 68416.m01284 heat shock protein-related contains wea... 32 1.8
At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contai... 32 2.3
At2g24990.1 68415.m02988 RIO1 family protein similar to extragen... 32 2.3
At3g11000.1 68416.m01328 expressed protein 31 3.1
At1g51530.1 68414.m05800 RNA recognition motif (RRM)-containing ... 31 3.1
At5g52910.1 68418.m06566 timeless family protein contains Pfam d... 31 4.0
At5g40340.1 68418.m04894 PWWP domain-containing protein KED, Nic... 31 4.0
At5g14140.1 68418.m01654 zinc finger (C2H2 type) family protein ... 31 4.0
At1g17140.2 68414.m02089 tropomyosin-related similar to Tropomyo... 31 4.0
At1g17140.1 68414.m02088 tropomyosin-related similar to Tropomyo... 31 4.0
At5g16720.1 68418.m01958 expressed protein contains Pfam profile... 31 5.3
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 31 5.3
At5g16780.1 68418.m01965 SART-1 family protein contains Pfam dom... 30 7.1
At1g73960.1 68414.m08565 expressed protein similar to TATA bindi... 30 7.1
At5g10490.1 68418.m01215 mechanosensitive ion channel domain-con... 30 9.3
At4g35590.1 68417.m05056 RWP-RK domain-containing protein low si... 30 9.3
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 30 9.3
At2g01100.3 68415.m00018 expressed protein 30 9.3
At2g01100.2 68415.m00017 expressed protein 30 9.3
At2g01100.1 68415.m00016 expressed protein 30 9.3
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 41.9 bits (94), Expect = 0.002
Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 17/169 (10%)
Query: 563 EDSETDCDQRSNSDNNESTDFKKDDSHSEVLKR-----KRKNLNPLRLQNNAGENDYLAQ 617
+D+E Q D K++ S E K K K + + + EN+ + +
Sbjct: 528 KDNEESSSQEETKDKENEKIEKEEASSQEESKENETETKEKEESSSQEETKEKENEKIEK 587
Query: 618 NR-VPSEEEKVLDLKRIKKEPHHYERRTEEAETSITNKTHIKQEPTIVEEEPADMTYNVQ 676
P EE K + ++I+KE + T+E ET +T K+E + E + NV
Sbjct: 588 EESAPQEETKEKENEKIEKEESASQEETKEKET----ETKEKEESSSNESQE-----NVN 638
Query: 677 NLRVKEEQIERPETIKSSTPTNEHYSSENSLKRLESLSKGEFPEIPKKN 725
K+EQ+E E K+ T+E S ENS+ E E E + N
Sbjct: 639 TESEKKEQVEENEK-KTDEDTSES-SKENSVSDTEQKQSEETSEKEESN 685
Score = 33.9 bits (74), Expect = 0.57
Identities = 33/158 (20%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 563 EDSETDCDQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQNRVPS 622
E SE + S +E+ D K++S S+ + R+ + ++++ E ++
Sbjct: 418 ETSEVSSQEESKGKESETKD--KEESSSQEESKDRETETKEKEESSSQEE---TMDKETE 472
Query: 623 EEEKVLDLKRIKKEPHHYERRTEEAETSITNKTHIKQEPTIVEEEPADMTYNVQNLRVKE 682
+EKV + K E ++ TE+ E+S +T K++ T +EE + + +E
Sbjct: 473 AKEKVESSSQEKNE----DKETEKIESSFLEETKEKEDETKEKEESSSQE------KTEE 522
Query: 683 EQIERPETIKSSTPTNEHYSSENSLKRLESLSKGEFPE 720
++ E + +SS+ +++ E+ S+ E E
Sbjct: 523 KETETKDNEESSSQEETKDKENEKIEKEEASSQEESKE 560
Score = 30.3 bits (65), Expect = 7.1
Identities = 30/164 (18%), Positives = 65/164 (39%), Gaps = 5/164 (3%)
Query: 563 EDSETDCDQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQNRVPS 622
E E D D+++N + ++K DD+ SEV+ + + +N+ D ++ + +
Sbjct: 282 ESKEKDIDEKANIEEARENNYKGDDASSEVVHESEEKTS--ESENSEKVED---KSGIKT 336
Query: 623 EEEKVLDLKRIKKEPHHYERRTEEAETSITNKTHIKQEPTIVEEEPADMTYNVQNLRVKE 682
EE + +K + + + +++ ++ H ++ E M N +
Sbjct: 337 EEVEDSVIKSVLPNTTDNGESSSDEKSTGSSSGHESDSLEGIKSEGESMEKNELLEKEFN 396
Query: 683 EQIERPETIKSSTPTNEHYSSENSLKRLESLSKGEFPEIPKKND 726
+ ST + + S E S + SKG+ E K +
Sbjct: 397 DSNGESSVTGKSTGSGDGGSQETSEVSSQEESKGKESETKDKEE 440
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 39.9 bits (89), Expect = 0.009
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 990 FRGCRDNFKDLSSLKQHCETVHSQSLHRCSLPGCNSAFFSRTKRNIHYESHVSRR 1044
+ GC F D+S+L++H +H + + C GC F +K HY H R
Sbjct: 83 YDGCGKTFFDVSALRKHSH-IHGERQYVCDQEGCGKKFLDSSKLKRHYLIHTGER 136
Score = 30.7 bits (66), Expect = 5.3
Identities = 15/49 (30%), Positives = 21/49 (42%)
Query: 992 GCRDNFKDLSSLKQHCETVHSQSLHRCSLPGCNSAFFSRTKRNIHYESH 1040
GC F D S LK+H + + C+ GC AF H ++H
Sbjct: 114 GCGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMKTH 162
Score = 30.7 bits (66), Expect = 5.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 794 CGRLFQNVYVLKTHYQTAHLKLRYKCNFDGCRAAYS 829
CG+ F + LK HY + Y C ++GC A+S
Sbjct: 115 CGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFS 150
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 38.3 bits (85), Expect = 0.027
Identities = 31/157 (19%), Positives = 68/157 (43%), Gaps = 10/157 (6%)
Query: 563 EDSETDCDQRSNSDNNEST--DFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQNRV 620
E++ T+ + + + +S + +K++ +E+ L+ + + + ++
Sbjct: 1174 EETATNGESLDDVETTKSVLLEVRKEEEEAEMKTDAEPRLDAIEKEELETVKTVVQDAKI 1233
Query: 621 PSEEEKVLDLKRIKKEPHHYERRTE--EAETSITNKTHIKQEPTIVEEEPADMTYNVQNL 678
+ EE K +H E+ E EA ++ + I +E T+ E AD+T ++ +
Sbjct: 1234 VNNEETTAHESESLKGDNHQEKNAEPVEATQNLDDAEQISREVTVDTEREADITEKIEKV 1293
Query: 679 RVKEEQIERPETIKSSTPTNEHYSSENSLKRLESLSK 715
+ E P I++ T E SE SL+ E + +
Sbjct: 1294 Q------EGPTVIETPTIQGEDIESETSLELKEEVDQ 1324
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 38.3 bits (85), Expect = 0.027
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 12/169 (7%)
Query: 558 KSYCMEDSETDCDQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQ 617
K ++ + D++ ++E KK+ S LK K+K + EN +
Sbjct: 1023 KEEAKKEKKKSQDKKREEKDSEERKSKKEKEESRDLKAKKKEEE--TKEKKESENHKSKK 1080
Query: 618 NRVPSEEEKVLDLKRIKKEPHHYERRTEEAETSITNKTHIKQEPTIVEEEPADMTYNVQN 677
E E D K +KKE E++ E E+ K K++ +E++ ++ +N
Sbjct: 1081 KEDKKEHE---DNKSMKKEEDKKEKKKHE-ESKSRKKEEDKKDMEKLEDQNSNKKKEDKN 1136
Query: 678 LRVKEEQIE--RPETIKSSTPTNEHYSSENSLKRLESLSKGEFPEIPKK 724
+ K + ++ + E+ K NE ++ K +ES SK + E+ KK
Sbjct: 1137 EKKKSQHVKLVKKESDKKEKKENE---EKSETKEIES-SKSQKNEVDKK 1181
Score = 36.7 bits (81), Expect = 0.081
Identities = 39/178 (21%), Positives = 70/178 (39%), Gaps = 9/178 (5%)
Query: 558 KSYCMEDSETDCDQR-SNSDNNESTDFK--------KDDSHSEVLKRKRKNLNPLRLQNN 608
KS + E D ++R S + ES D K K+ SE K K+K N
Sbjct: 1032 KSQDKKREEKDSEERKSKKEKEESRDLKAKKKEEETKEKKESENHKSKKKEDKKEHEDNK 1091
Query: 609 AGENDYLAQNRVPSEEEKVLDLKRIKKEPHHYERRTEEAETSITNKTHIKQEPTIVEEEP 668
+ + + + + EE K + KK+ E + + N+ Q +V++E
Sbjct: 1092 SMKKEEDKKEKKKHEESKSRKKEEDKKDMEKLEDQNSNKKKEDKNEKKKSQHVKLVKKES 1151
Query: 669 ADMTYNVQNLRVKEEQIERPETIKSSTPTNEHYSSENSLKRLESLSKGEFPEIPKKND 726
+ + ++IE ++ K+ E SS++ K+ E K + KKN+
Sbjct: 1152 DKKEKKENEEKSETKEIESSKSQKNEVDKKEKKSSKDQQKKKEKEMKESEEKKLKKNE 1209
Score = 34.3 bits (75), Expect = 0.43
Identities = 33/166 (19%), Positives = 69/166 (41%), Gaps = 3/166 (1%)
Query: 563 EDSETDCDQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQNRVPS 622
+D + + NS+ + + KK+ ++E LK++ N N+ + N+
Sbjct: 942 KDKKKKKKESKNSNMKKKEEDKKEYVNNE-LKKQEDNKKETTKSENSKLKEENKDNKEKK 1000
Query: 623 EEEKVLDLKRIKKEPHHYERRTEEAETSITNKTHIK--QEPTIVEEEPADMTYNVQNLRV 680
E E R KKE + +T+E K+ K +E E + ++L+
Sbjct: 1001 ESEDSASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEERKSKKEKEESRDLKA 1060
Query: 681 KEEQIERPETIKSSTPTNEHYSSENSLKRLESLSKGEFPEIPKKND 726
K+++ E E +S ++ + + +S+ K E + KK++
Sbjct: 1061 KKKEEETKEKKESENHKSKKKEDKKEHEDNKSMKKEEDKKEKKKHE 1106
Score = 33.1 bits (72), Expect = 1.0
Identities = 37/171 (21%), Positives = 73/171 (42%), Gaps = 13/171 (7%)
Query: 563 EDSETDCDQRSNSDNNESTDF--KKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQNRV 620
++ E + S S N E ++ KK + E K K+K+ + R + ++ E +
Sbjct: 995 DNKEKKESEDSASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEER------KS 1048
Query: 621 PSEEEKVLDLKRIKKEPHHYERRTEE---AETSITNKTHIKQEPTIVEEEPADMTYNVQN 677
E+E+ DLK KKE E++ E ++ K H + EE+ + + ++
Sbjct: 1049 KKEKEESRDLKAKKKEEETKEKKESENHKSKKKEDKKEHEDNKSMKKEEDKKEKKKHEES 1108
Query: 678 LRVKEEQIERPETIKSSTPTNEHYSSENSLKRLE--SLSKGEFPEIPKKND 726
K+E+ ++ +N+ +N K+ + L K E + KK +
Sbjct: 1109 KSRKKEEDKKDMEKLEDQNSNKKKEDKNEKKKSQHVKLVKKESDKKEKKEN 1159
Score = 31.1 bits (67), Expect = 4.0
Identities = 32/159 (20%), Positives = 73/159 (45%), Gaps = 7/159 (4%)
Query: 554 SNLNKSYCMEDSETDCDQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQ--NNAGE 611
S+ +K+ + +++ D +++SD +++ + DS ++ ++ N + +Q + A
Sbjct: 1520 SDESKNEILMQADSQADSQTDSDESKNEILMQADSQADSQTDSDESKNEILMQADSQAKI 1579
Query: 612 NDYLAQNRVPSEEEKVLDLKRIKKEPHHYERRTEEAETSITNKTHIKQEPTIVEEEPADM 671
+ L N+V +E+ ++ + + + R EE++ TN+ K+ T EE +
Sbjct: 1580 GESLEDNKVKGKEDNGDEVGKENSKTIEVKGRHEESKDGKTNENGGKEVST---EEGSKD 1636
Query: 672 TYNVQNLRVKEEQIERPETIKSSTPTN--EHYSSENSLK 708
+ V+ KE+ I+ + N E S+E K
Sbjct: 1637 SNIVERNGGKEDSIKEGSEDGKTVEINGGEELSTEEGSK 1675
>At5g41020.1 68418.m04986 myb family transcription factor contains
Pfam profile: PF00249 Myb DNA binding domain
Length = 588
Score = 37.9 bits (84), Expect = 0.035
Identities = 39/166 (23%), Positives = 75/166 (45%), Gaps = 15/166 (9%)
Query: 564 DSETDCDQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQNRVPSE 623
DSE + D +S + K D + +KRK+K + + G+ + +N +E
Sbjct: 106 DSEAEDDGVEKKSKEKSKETKVDSEAHDGVKRKKKKSK----KESGGD---VIEN---TE 155
Query: 624 EEKVLDLKRIKKEPHHYERRTEEAETSITNKTHIKQEPTI---VEEEPADMTYNVQNLRV 680
KV D K+ K++ + EE + + K++P++ VE+ D T + + R
Sbjct: 156 SSKVSDKKKGKRKRDDTDLGAEENIDKEVKRKNNKKKPSVDSDVEDINLDSTNDGKKKRK 215
Query: 681 KEEQIERPETIKSSTPTNEHYSSENSLKRLESLSKGEFPEIPKKND 726
K++Q E ET ++ N ++ K+ + + E E +K+D
Sbjct: 216 KKKQSEDSETEENG--LNSTKDAKKRRKKKKKKKQSEVSEAEEKSD 259
>At3g19050.1 68416.m02420 kinesin motor protein-related contains Pfam
profile: PF00225 Kinesin motor domain; contains
non-consensus splice site (GC) at intron 12
Length = 2722
Score = 37.9 bits (84), Expect = 0.035
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 6/108 (5%)
Query: 585 KDDSHSEVLKRKR--KNLNPLRLQNNAGENDYLAQNRVPSEEEKVLDLKRIKKEPHHYER 642
KD++ + L+R+ L+ +R Q + N R+ +EK +DL + KK ER
Sbjct: 2276 KDEAERQRLQREELEMELHTIRQQMESARNADEEMKRIL--DEKHMDLAQAKKHIEALER 2333
Query: 643 RTEEAETSITN-KTHIKQEPTIVEEEPADMTYNVQNLRVKEEQIERPE 689
T + +T IT HI + E + ++ + + L EQ+ +PE
Sbjct: 2334 NTADQKTEITQLSEHISELNLHAEAQASEYMHKFKELEAMAEQV-KPE 2380
>At5g55780.1 68418.m06952 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 685
Score = 37.1 bits (82), Expect = 0.062
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 772 DGFFVSITDIPVDNDNPKKCTACGRLFQNVYVLKTHYQTAHLKLR-YKCNFDGCRAAY-S 829
D F++I D ++D P C C + V +++ +LR YKCN D C A +
Sbjct: 539 DSHFLTICDGKEESDEPDWCEVCEGKIEEVKETGYNWKGKKTELRYYKCN-DCCTALHVD 597
Query: 830 SRKGRDQH-SGNVTLHRKLSSDDFRVTDDSSKLLD 863
GRD + T LS DF ++D K +D
Sbjct: 598 CLFGRDMYIKPGETEKEYLSFSDFSFSEDVWKWMD 632
>At5g54410.1 68418.m06777 hypothetical protein
Length = 219
Score = 36.7 bits (81), Expect = 0.081
Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 3/143 (2%)
Query: 577 NNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQNRVPSEEEKVLDLKRIKKE 636
+N S D K + +E + K L LQ+N ND + R + E+K L+ ++ K+
Sbjct: 19 SNSSADDKIVQALAEAIDAANKKLREETLQSNEEANDAMETFRRKTNEQKRLENEKRKQA 78
Query: 637 -PHHYERRTEEAETSITNKTHIKQ-EPTIVEEEPADMTYNVQNLRVKEEQIERPETIKSS 694
+ + +T + NK Q E EEE D+T + +EE+ + P K
Sbjct: 79 LKDAKDLKDLTYKTKVENKLKKTQPEKDRAEEEEKDLTEEKKKDPTEEEE-KDPTEEKKK 137
Query: 695 TPTNEHYSSENSLKRLESLSKGE 717
P E K+ + + E
Sbjct: 138 EPAEEKKKDPTEEKKKDPAEEEE 160
>At1g20920.1 68414.m02619 DEAD box RNA helicase, putative similar to
RNA helicase [Rattus norvegicus] GI:897915; contains
Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271:
Helicase conserved C-terminal domain
Length = 1166
Score = 36.7 bits (81), Expect = 0.081
Identities = 20/85 (23%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 566 ETDCDQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQNRVPSEEE 625
E + D + + + + ++ +K D SE KR+ K+ R++++ E+DY + E+
Sbjct: 17 EEEADLKKSRRDRDRSNERKKDKGSE--KRREKDRRKKRVKSSDSEDDYDRDDDEEREKR 74
Query: 626 KVLDLKRIKKEPHHYERRTEEAETS 650
K + +R +++ +RR+E ++S
Sbjct: 75 KEKERERRRRDKDRVKRRSERRKSS 99
Score = 33.1 bits (72), Expect = 1.0
Identities = 40/171 (23%), Positives = 67/171 (39%), Gaps = 7/171 (4%)
Query: 554 SNLNKSYCMEDSETDCDQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRL---QNNAG 610
S KS ED + D+R NE ++ RKR R +
Sbjct: 93 SERRKSSDSEDDVEEEDERDKRRVNEKERGHREHERDRGKDRKRDREREERKDKEREREK 152
Query: 611 ENDYLAQNRVPSEEEKVLDLKRIKKEPHHYERRTEEAET-SITNKTHIKQEPTIVEEEPA 669
+ + + R E+E+V + +R ++E +RR E E S N+ + EE
Sbjct: 153 DRERREREREEREKERVKERERREREDGERDRREREKERGSRRNRERERSREVGNEESDD 212
Query: 670 DMTYNVQNLRVKEEQIERPETIKSSTPTNEHYSSENSLKRLESLSKGEFPE 720
D+ +++ R + + + E KS ++ H E+S KR GE E
Sbjct: 213 DVKRDLKRRRKEGGERKEKEREKSVGRSSRH---EDSPKRKSVEDNGEKKE 260
>At5g40520.1 68418.m04916 expressed protein
Length = 693
Score = 36.3 bits (80), Expect = 0.11
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 2/107 (1%)
Query: 564 DSETDCDQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQNRVPSE 623
D E + D + +S + S + K D H E R+R L +Q + E +A N +
Sbjct: 559 DIEMEVDNQFSSRSLFSVENIKSDDHGEQKPRRRNKNQYLAIQEISDETSLVAHNLIGRL 618
Query: 624 EEKVLDLKRIKKEPHHYERRTEEAETSITNKTHIKQEPTIVEEEPAD 670
EK D +R+ E ER E+ + K + ++ + +D
Sbjct: 619 LEKFADRQRLNLETD--ERSYLGGESRLQEKVEVSEKKQASSQAKSD 663
>At3g42690.1 68416.m04439 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At2g11345, At4g04130
Length = 1009
Score = 35.5 bits (78), Expect = 0.19
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 264 PAAMVAALSQNPMGLASLQALLPQISTKPVELPDKSVNSFSQSKPDDTRTEEESVLNLSK 323
P+ M ++ PM +A +L +++P+K + S P DT E E + +
Sbjct: 575 PSPMPTEAAKEPMSIAVEDDILAGEGVTAMDIPEKIAEIPASSIPTDTAKEAEK--DAIE 632
Query: 324 DTTYVESN--QNPRNVLLGPPKRQWGATQ 350
D T+ E N QNP + + PK + G +
Sbjct: 633 DDTFGEENQTQNPASPIPNLPKTKEGEAE 661
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 35.5 bits (78), Expect = 0.19
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 780 DIPVDNDNPKKCTACGRLFQNVYVLKTHYQTAHLKLRYKCNFDGCRAAYSSRKGRDQH 837
++ ++ + C CG F+ LK H Q+ L+ + C D C A+Y + ++H
Sbjct: 57 EVDEESSSNHTCQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRH 114
Score = 35.1 bits (77), Expect = 0.25
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 992 GCRDNFKDLSSLKQHCETVHSQ-SLHRCSLPGCNSAFFSRTKRNIHYES 1039
GC F S+L++H + VH C PGC F + RN H S
Sbjct: 311 GCSSTFSKASNLQKHMKAVHDDIRPFVCGFPGCGMRFAYKHVRNKHENS 359
>At5g24880.1 68418.m02946 expressed protein ; expression supported
by MPSS
Length = 443
Score = 35.1 bits (77), Expect = 0.25
Identities = 34/158 (21%), Positives = 67/158 (42%), Gaps = 16/158 (10%)
Query: 563 EDSETDCDQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQNRVPS 622
+D E ++ DNN++ K + +V K+ +N P ++ + E + + +
Sbjct: 279 DDIEEKTEEMKEQDNNQAN---KSEEEEDVKKKIDENETPEKVDTESKEVESVEETTQEK 335
Query: 623 EEEKVLDLKRIKKEPHHYERRTEEAETSITNKTHIKQEPTIVEEEPADMTYNVQNLRVKE 682
EEE +K+E + R EE E Q+ + EEE + + + +VKE
Sbjct: 336 EEE-------VKEEG---KERVEEEEKEKEKVKEDDQKEKVEEEEKEKVKGDEEKEKVKE 385
Query: 683 EQI---ERPETIKSSTPTNEHYSSENSLKRLESLSKGE 717
E+ ++ E +K + Y+ + K E+ K +
Sbjct: 386 EESAEGKKKEVVKGKKESPSAYNDVIASKMQENPRKNK 423
>At5g01840.1 68418.m00103 ovate family protein 59% similar to ovate
protein (GI:23429649) [Lycopersicon esculentum];
contains TIGRFAM TIGR01568 : uncharacterized
plant-specific domain TIGR01568
Length = 270
Score = 35.1 bits (77), Expect = 0.25
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 128 SIQERESRRTTPEDTVNVKKERISPAPNRTSPRESRSPAQKVSSAEVSPSH 178
S ++++ ++ P T + KK P P T+P R P + S++ PSH
Sbjct: 25 SKSKKKNLQSQPNSTTSKKKHHAVPTPTSTTPLSPRPPRRPSHSSKAPPSH 75
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 35.1 bits (77), Expect = 0.25
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 992 GCRDNFKDLSSLKQHCETVHSQ-SLHRCSLPGCNSAFFSRTKRNIHYES 1039
GC F S+L++H + VH C PGC F + RN H S
Sbjct: 223 GCSSTFSKASNLQKHMKAVHDDIRPFVCGFPGCGMRFAYKHVRNKHENS 271
>At1g58230.1 68414.m06618 WD-40 repeat family protein /
beige-related contains Pfam PF00400: WD domain, G-beta
repeat; similar to Lipopolysaccharide-responsive and
beige-like anchor protein (CDC4-like protein)
(Beige-like protein) (SP:P50851) [Homo sapiens}
Length = 1280
Score = 34.7 bits (76), Expect = 0.33
Identities = 25/110 (22%), Positives = 50/110 (45%), Gaps = 3/110 (2%)
Query: 64 STPNEAHDKIRDRKPEYADPSEQLK--LEAEFRRLMEQQGRDLCNDDSLKYLQHMMEVNH 121
+T NE + I + K EQ+K L RR+ ++ G D C +DS + Q M+ +
Sbjct: 349 ATENETSNVINESKSGVIHIPEQMKKFLLKGIRRITDEGGSDSCENDSSQAEQSFMDTSA 408
Query: 122 HYKYLKSIQERESRRTTPEDTVNVKKERISPAPNRTS-PRESRSPAQKVS 170
++ + ++ + +D V+ + + TS P +P +K++
Sbjct: 409 DIQFSELVRTSSGLKDVVQDKVDASSLEVGTSEVLTSVPCVLVTPKRKLA 458
>At2g04970.1 68415.m00518 hypothetical protein similar to At2g15200,
At1g32830, At2g14140, At3g30450, At4g03990, At5g34895,
At3g47270, At2g02200
Length = 808
Score = 34.3 bits (75), Expect = 0.43
Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 7/130 (5%)
Query: 562 MEDSETDCDQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQNRVP 621
ME E ++ + E +++ D+ + K+ + + GE + +
Sbjct: 510 MEGEEEKQEEEGKEEEEEKVEYRGDEGTEKQEIPKQGD------EEMEGEEEKQEEEGKE 563
Query: 622 SEEEKVLDLKRIKKEPHHYERRTEEAETSITNKTHIKQEPTIVEEEP-ADMTYNVQNLRV 680
EEEKVL + +++ H E +EA +++ PT E +P + T V
Sbjct: 564 EEEEKVLKEESVEEHDEHDETEDQEAYVILSDDEDNGTTPTEKESQPQKEETTEVPKEEN 623
Query: 681 KEEQIERPET 690
EE E ET
Sbjct: 624 VEEHDEHDET 633
>At1g72650.2 68414.m08402 myb family transcription factor contains
Pfam PF00249: Myb-like DNA-binding domain
Length = 630
Score = 34.3 bits (75), Expect = 0.43
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 4/123 (3%)
Query: 198 SPLNHLQNMQPYDFRKKADNEKEARKLNDVNATDRAIDLMRSQFFNFPLQANLPCPPMAM 257
S L H N+QPY + K+ +E L V +R ++ SQ + P AN+ C
Sbjct: 125 SGLLHSDNVQPYTDQVKSRSEYNEEMLQKVEQEERLENVHGSQMPSTPADANIQC--SNE 182
Query: 258 PSAFSHPAAMVAALSQNPMGLASLQALLPQISTKPVELPDKSVNSFSQSKPDDTRTEEES 317
+ F AL Q+ + ++ + + + V P ++ S + KPD +R E
Sbjct: 183 NNFFEEDQVHHEALLQDECKMN--ESDMMERCSNAVASPKETALSAAAQKPDFSRVRGEI 240
Query: 318 VLN 320
L+
Sbjct: 241 CLD 243
>At1g27170.1 68414.m03310 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1544
Score = 34.3 bits (75), Expect = 0.43
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 237 MRSQFFNFPLQANLPCPPMAMPSAFSHPAAMVAALSQNPMGLASLQALLP-QISTKPVE- 294
++ F N LP P ++PS + A L Q P + L +LL Q+S+ P+E
Sbjct: 1020 LKKLFINGSAVEELPLKPSSLPSLYDFSAGDCKFLKQVPSSIGRLNSLLQLQLSSTPIEA 1079
Query: 295 LPDK 298
LP++
Sbjct: 1080 LPEE 1083
>At1g22670.1 68414.m02833 protease-associated zinc finger
(C3HC4-type RING finger) family protein contains Pfam
domain, PF02225: protease-associated (PA) domain and
Pfam domain, PF00097: Zinc finger, C3HC4 type (RING
finger); similar to ReMembR-H2 protein JR702
[Arabidopsis thaliana] gi|6942149|gb|AAF32326
Length = 422
Score = 34.3 bits (75), Expect = 0.43
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 427 SPHLRRKISPHDGRSAQTHSVLISPHAAGLNVPPVMN--HMNPFGSYTLLNPPQGLRQFA 484
S +LRR+ SP S ++H + S H+ G + +N M+P+ Y N GL
Sbjct: 341 SENLRRQASPLQSSSQRSHLSMKSSHSLGYSTMSPLNAMGMSPYRPYP-SNASPGLFSST 399
Query: 485 SNIPMDYKNSMNVGFSHFDQSHTV 508
+++ +Y + FSHF +H++
Sbjct: 400 NHLLSNYTANT---FSHFASAHSL 420
>At4g36105.1 68417.m05139 expressed protein
Length = 245
Score = 33.9 bits (74), Expect = 0.57
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Query: 642 RRTEEAETSITNKTHIKQEPTIVEEEPADMTYNVQNLRVKEEQIERPETIKSSTPTNEHY 701
RR AE+ + K++ I EEE T +QNL ++ EQ ER + + N
Sbjct: 109 RRVTAAESETCSH---KEKVIICEEEITRKTVQIQNLSLRLEQTERIVMTECESLKNALT 165
Query: 702 SSENSLKRLESLSKGEFPEI 721
+S N L L S S+ F I
Sbjct: 166 ASNNVLDTLLSSSRRHFQTI 185
>At5g40530.2 68418.m04918 expressed protein contains Pfam profile
PF05148: Protein of unknown function (DUF691)
Length = 301
Score = 33.1 bits (72), Expect = 1.0
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 644 TEEAETSITNKTHIKQEPTIVEEEPADMTYNVQNLRVKEEQIERPETIKSSTPTNEHYSS 703
TEE +TS K ++ P +EEP + T QN + + + + SS P+ S
Sbjct: 3 TEENKTSRNRKRKRQRNPKPSKEEPIETTPKNQNEKKNQRDTKNQQHGGSSAPSKRPKPS 62
Query: 704 ENSLKRL-ESLSKGEFPEIPKK 724
N L L E LS G+F + +K
Sbjct: 63 -NFLDALRERLSGGQFRMLNEK 83
>At5g40530.1 68418.m04919 expressed protein contains Pfam profile
PF05148: Protein of unknown function (DUF691)
Length = 287
Score = 33.1 bits (72), Expect = 1.0
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 644 TEEAETSITNKTHIKQEPTIVEEEPADMTYNVQNLRVKEEQIERPETIKSSTPTNEHYSS 703
TEE +TS K ++ P +EEP + T QN + + + + SS P+ S
Sbjct: 3 TEENKTSRNRKRKRQRNPKPSKEEPIETTPKNQNEKKNQRDTKNQQHGGSSAPSKRPKPS 62
Query: 704 ENSLKRL-ESLSKGEFPEIPKK 724
N L L E LS G+F + +K
Sbjct: 63 -NFLDALRERLSGGQFRMLNEK 83
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 33.1 bits (72), Expect = 1.0
Identities = 33/155 (21%), Positives = 69/155 (44%), Gaps = 9/155 (5%)
Query: 554 SNLNKSYCMEDSETDCDQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGEND 613
+NL+ S E +E+ S S + +ST +++ + + ++ + + +++ +
Sbjct: 262 TNLSTSNATETTESSGSDESGS-SGKSTGYQQTKNEEDEKEKVQSSEEESKVKESGKNEK 320
Query: 614 YLAQNRVPSEEEKVLDLKRIKKEPHHYERRTEEAETSITNKTHIKQEPTIVEEEP----A 669
+ ++ S+EEK +R KKE + +E E K + EEEP
Sbjct: 321 DASSSQDESKEEKP---ERKKKEESSSQGEGKEEEPEKREKEDSSSQEESKEEEPENKEK 377
Query: 670 DMTYNVQNLRVKEEQIERPETIKSSTPTNEHYSSE 704
+ + + + +KE +I+ E SS NE+ +E
Sbjct: 378 EASSSQEENEIKETEIKEKEE-SSSQEGNENKETE 411
Score = 31.1 bits (67), Expect = 4.0
Identities = 31/151 (20%), Positives = 59/151 (39%), Gaps = 3/151 (1%)
Query: 562 MEDSETDCDQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQNRVP 621
++ SE + + + N + +D+S E +RK+K + + + E + +
Sbjct: 303 VQSSEEESKVKESGKNEKDASSSQDESKEEKPERKKKEESSSQGEGKEEEPEKREKEDSS 362
Query: 622 SEEE-KVLDLKRIKKEPHHYERRTEEAETSITNKTHIKQEPTIVEEEPADMTYNVQNLR- 679
S+EE K + + +KE + E ET I K + +E + Q
Sbjct: 363 SQEESKEEEPENKEKEASSSQEENEIKETEIKEKEESSSQEGNENKETEKKSSESQRKEN 422
Query: 680 -VKEEQIERPETIKSSTPTNEHYSSENSLKR 709
E++IE+ E+ SS + KR
Sbjct: 423 TNSEKKIEQVESTDSSNTQKGDEQKTDESKR 453
>At2g32310.1 68415.m03950 expressed protein
Length = 325
Score = 33.1 bits (72), Expect = 1.0
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 458 VPPV-MNHMNPFGSYTLLNPPQGLRQFASNIPMDYKNSMNVG-FSHFDQSHTV 508
+PP+ +N P G + + +QF+SN+PM ++N +N+G F S TV
Sbjct: 180 LPPLNINFNEPGGGGSSIAADSSQQQFSSNLPMWHENQLNIGSFDSGPSSSTV 232
>At1g30640.1 68414.m03747 protein kinase, putative contains protein
kinase domain, Pfam:PF00069
Length = 562
Score = 33.1 bits (72), Expect = 1.0
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 62 LASTPNEAHDKIRDRKPEYADPSEQLKLEAEFRRLMEQQGRDL-CNDDSLKYLQHMMEVN 120
+A+ P + +IR +KP+ + P+++ + E + L D N K +
Sbjct: 1 MATEPTRSWFQIRQQKPDKSSPTKKGQ-EGNVKNLGRPPMNDAPSNATKQKVAAAKQYIE 59
Query: 121 HHYKYLK-SIQERESRRTTPEDTV 143
+HYK K S+QER+ RR+ E +
Sbjct: 60 NHYKIQKKSLQERKERRSILEQNL 83
>At1g04445.1 68414.m00436 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 172
Score = 33.1 bits (72), Expect = 1.0
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 788 PKKCTACGRLFQNVYVLKTHYQTAHLKLRYKCNFDGCRAAYSSRKGRDQHSGNV 841
P++C C R+F + + L +HY AH +Y AA ++ +H NV
Sbjct: 6 PQECAVCKRVFLSSHQLISHYNAAHSNRQYSTFSSSPAAAAAAAPTTFRHYTNV 59
>At5g27120.1 68418.m03237 SAR DNA-binding protein, putative strong
similarity to SAR DNA-binding protein-1 [Pisum sativum]
GI:3132696; contains Pfam profile PF01798: Putative
snoRNA binding domain
Length = 533
Score = 32.7 bits (71), Expect = 1.3
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 5/107 (4%)
Query: 600 LNPLRLQNNAGENDYLAQNRVPSEE--EKVLDLKRIKKEPHHYERRTEEAETSITNKTHI 657
+ P + N A ++ L V SE ++ D K+ KK E +TEE +NK
Sbjct: 429 ITPAKTYNTAADS-LLQTPTVDSENGVKEKKDKKKKKKADDEEEAKTEEPSKKKSNKKKT 487
Query: 658 KQEPTIVEEEPADMTYNVQNLRVKEEQIERPETIKSSTPTNEHYSSE 704
+ EP EEPA + + +EE+ E P K + + +E
Sbjct: 488 EAEPE-TAEEPAKKE-KKKKRKHEEEETEMPAKKKEKSEKKKKKKTE 532
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 32.7 bits (71), Expect = 1.3
Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Query: 982 LSKDGTYPFRGCRDNFKDLSSLKQHCETVHSQSLH-RCSLPGCNSAFFSRTKRNIHYESH 1040
L K P +GC NF L QH + VHS +C GC F R H H
Sbjct: 1256 LHKRNICPIKGCGKNFFSHKYLVQH-QRVHSDDRPLKCPWKGCKMTFKWAWSRTEHIRVH 1314
Query: 1041 VSRR 1044
R
Sbjct: 1315 TGAR 1318
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 32.7 bits (71), Expect = 1.3
Identities = 32/155 (20%), Positives = 65/155 (41%), Gaps = 10/155 (6%)
Query: 563 EDSETDCDQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQNRVPS 622
ED + ++ D ++ +KD+S +E K+K K + ++ + E+ + +
Sbjct: 160 EDVSQEKEELEEEDGKKNKKKEKDESGTEEKKKKPKKEKKQKEESKSNEDKKVKGKKEKG 219
Query: 623 EEEKVLDLKRIKKEPHHYERRTEEAETSITNKTHIKQE---------PTIVEEEPADMTY 673
E+ + KK+ H + + + S NK K E P ++E + T
Sbjct: 220 EKGDLEKEDEEKKKEHDETDQEMKEKDSKKNKKKEKDESCAEEKKKKPDKEKKEKDESTE 279
Query: 674 NV-QNLRVKEEQIERPETIKSSTPTNEHYSSENSL 707
+ L+ K+ + E+PE T EH ++E +
Sbjct: 280 KEDKKLKGKKGKGEKPEKEDEGKKTKEHDATEQEM 314
>At1g26540.1 68414.m03234 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 695
Score = 32.7 bits (71), Expect = 1.3
Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Query: 581 TDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQNRVPSEEEKVLDLKRIKKEPHHY 640
T K+ D+ +E K +K P++ QN G + Q+ +P EE ++ K+E +
Sbjct: 379 TPLKQQDAETEGKKSPKKTPEPVKHQN--GLENSSTQHEMPEEENSNEKSRKRKREQNQN 436
Query: 641 ERRTEEAETSITNKTHIKQEPTIVEEEPAD 670
E ET +K + + + D
Sbjct: 437 SNLNETDETCNVSKAGVNGTSDTIRVDDVD 466
>At5g10950.1 68418.m01271 cylicin-related low similarity to
SP|Q28092 Cylicin II (Multiple-band polypeptide II) {Bos
taurus}
Length = 395
Score = 32.3 bits (70), Expect = 1.8
Identities = 30/138 (21%), Positives = 59/138 (42%), Gaps = 8/138 (5%)
Query: 582 DFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQNRVPSEEEKVLDLKRIKKEPHHYE 641
D +D+ + + + P L++ D +A+N +E KVL K +
Sbjct: 218 DQDEDEEAGDDIDTSSEEAKPKVLKSCNSNADEVAENSSDEDEPKVLKTNNSKAD----- 272
Query: 642 RRTEEAETSITNKTHIKQEPTIVEEEPADMTYNVQNLRVKEEQIER--PETIKSSTPTNE 699
+ E+ E + T+ + + + +D N + KE I + + IKS+T E
Sbjct: 273 -KDEDEEENETSDDEAEPKALKLSNSNSDNGENNSSDDEKEITISKITSKKIKSNTADEE 331
Query: 700 HYSSENSLKRLESLSKGE 717
+ +E+ K ++ +S GE
Sbjct: 332 NGDNEDGEKAVDEMSDGE 349
>At3g10680.1 68416.m01284 heat shock protein-related contains weak
similarity to Pfam profile PF00011: Hsp20/alpha
crystallin family
Length = 490
Score = 32.3 bits (70), Expect = 1.8
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 16/123 (13%)
Query: 619 RVPSEEEKVLDLKR---IKKEPHHYERRTEEAET------SITNKTHIKQEPTIVEEEPA 669
R ++EEKV++ K I ++ + + EEA++ S+ K K+E I ++
Sbjct: 211 RERAKEEKVVERKEAAHIVQQKIGDKLKEEEAKSTPTLGGSLKPKVQAKEEKVIERKKDD 270
Query: 670 DMTYNVQNLRVKEEQIERPETIKSSTPTNEHYSSENSLKRLESLSKGEFPEIPKKNDINA 729
D++ +VKE++I R TI + + EH K +E GE + + IN
Sbjct: 271 DISQLKTGQKVKEKEISRTPTIDARVESKEH------AKVVEKKEDGEIGQKLEGGRIN- 323
Query: 730 LGP 732
LGP
Sbjct: 324 LGP 326
>At5g65900.1 68418.m08295 DEAD/DEAH box helicase, putative contains
Pfam profiles PF00270:DEAD/DEAH box helicase and
PF00271: Helicase conserved C-terminal domain;
identical to cDNA RH27 helicase, partial GI:4033334
Length = 633
Score = 31.9 bits (69), Expect = 2.3
Identities = 29/154 (18%), Positives = 69/154 (44%), Gaps = 4/154 (2%)
Query: 577 NNESTDFKKDDSH-SEVLKRKRKNLNPLRLQNNAGENDYLAQNRVPSEEEKVLDLKRIKK 635
++E D K++++ E K+K+K N R + GE++ +A+ +++K L++ +
Sbjct: 42 DHEDGDAKENNALIDEEPKKKKKKKNKKRGDTDDGEDEAVAEEEPKKKKKKNKKLQQ-RG 100
Query: 636 EPHHYERRTEEAETSITNKTHIKQEPTIVEEEPADMTYNVQNLRVKEEQIERPETIKSST 695
+ + E E K +++ T + E ++ + +++E I +T +S +
Sbjct: 101 DTNDEEDEVIAEEEEPKKKKKKQRKDTEAKSEEEEVEDKEEEKKLEETSIMTNKTFESLS 160
Query: 696 PTNEHYSS--ENSLKRLESLSKGEFPEIPKKNDI 727
++ Y S E R+ + P + D+
Sbjct: 161 LSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDV 194
>At2g24990.1 68415.m02988 RIO1 family protein similar to extragenic
suppressor of the bimD6 mutation (SUDD) [Emericella
nidulans] GI:2338556, RIO1 [Saccharomyces cerevisiae]
GI:1359602; contains Pfam profile PF01163: RIO1 family
Length = 537
Score = 31.9 bits (69), Expect = 2.3
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 68 EAHDKIRDRKPEYADPSEQLKLEAEFRRLMEQQGRDLCNDDSLKYLQHMMEVNHHYKYLK 127
+A KI ++K E D ++ + E E E+ + +++ L + H K +K
Sbjct: 449 DALPKIEEQKIEVNDEEKEEEGEEEEDGESEEGSEEEESEEELGHEDKKAARKEHKKKVK 508
Query: 128 SIQERESRRTTPEDTVNVKKERISPAPNRT 157
++RESR+T +V +K+++S P++T
Sbjct: 509 E-EKRESRKTKTPKSVKKRKKKVS-KPHKT 536
>At3g11000.1 68416.m01328 expressed protein
Length = 488
Score = 31.5 bits (68), Expect = 3.1
Identities = 30/133 (22%), Positives = 57/133 (42%), Gaps = 13/133 (9%)
Query: 555 NLNKSYCMEDSETDCDQRSN--SDNNESTDFKKDDSH---SEVLKRKRKNLNPLRLQNNA 609
NL K+ E + + D+R S + T + SH S ++K N Q
Sbjct: 213 NLGKTKEWETASNNADERRTQPSVSQSGTSYSSALSHMTASSTQEKKNSITNEGSSQACK 272
Query: 610 G-ENDYLAQNRVPSEEEK-------VLDLKRIKKEPHHYERRTEEAETSITNKTHIKQEP 661
G EN + + RVP + ++ + +K +H+++ + + + + P
Sbjct: 273 GVENPWTSAARVPPIHQDSGGFRNAAMEGEDVKVNAYHHQQNLHPTQKGTSTTANNRIVP 332
Query: 662 TIVEEEPADMTYN 674
+I +EEPA+ TY+
Sbjct: 333 SISKEEPAEDTYS 345
>At1g51530.1 68414.m05800 RNA recognition motif (RRM)-containing
protein
Length = 391
Score = 31.5 bits (68), Expect = 3.1
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 67 NEAHDKIRDRKPEYADPSEQLKLEAEFRRLMEQQGRDLCNDDSLKYLQHMMEVNHHYKYL 126
NE H+ ++ R E ADP + +++E + RRL Q + N S+ + Q + H +
Sbjct: 265 NETHEMLQ-RNTEQADPQQAIEVEDQIRRLSNLQLPGMEN-KSIHHHQPSPSIGSHAHFP 322
Query: 127 KSIQE 131
++E
Sbjct: 323 SQVRE 327
>At5g52910.1 68418.m06566 timeless family protein contains Pfam
domains PF05029: Timeless protein C terminal region and
PF04821: Timeless protein
Length = 1141
Score = 31.1 bits (67), Expect = 4.0
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 8/82 (9%)
Query: 637 PHHYERRTEEAETSITNKTHIKQEPTIVEEEPADMTYNVQNLRVKEEQIERPETIKS-ST 695
P E TE ETS+ EPT EEE D +Y + R E + + S S
Sbjct: 1037 PGGSEDNTERNETSL-------HEPTAGEEEDNDQSYITRESRQSETDVHISDNGPSTSL 1089
Query: 696 PTNEHYSSENSLKRLESLSKGE 717
P + + SS+N L+ E G+
Sbjct: 1090 PEDPNLSSDNELEDDELADWGD 1111
>At5g40340.1 68418.m04894 PWWP domain-containing protein KED,
Nicotiana tabacum, EMBL:AB009883
Length = 1008
Score = 31.1 bits (67), Expect = 4.0
Identities = 28/157 (17%), Positives = 63/157 (40%), Gaps = 6/157 (3%)
Query: 563 EDSETDCDQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQNRVPS 622
+D + Q++ + + D H ++ K +++ + + + GE N
Sbjct: 699 KDKKGKAKQKAEEIEVTGKEENETDKHGKMKKERKRKKSESKKEGGEGEETQKEANESTK 758
Query: 623 EEEKVLDLKRIKKEPHHYERRTEEAETSITNK----THIKQEPTIVEEEPADMTYNVQNL 678
+E K + K+ E + E +E++ + K++ VEEE +V++
Sbjct: 759 KERKRKKSESKKQSDGEEETQKEPSESTKKERKRKNPESKKKAEAVEEEET-RKESVEST 817
Query: 679 RVKEEQIERPETIKSSTPTNEHYSSENSLKRLESLSK 715
+ KE + ++P+ + P + K+ E SK
Sbjct: 818 K-KERKRKKPKHDEEEVPNETEKPEKKKKKKREGKSK 853
>At5g14140.1 68418.m01654 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 427
Score = 31.1 bits (67), Expect = 4.0
Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 15/100 (15%)
Query: 791 CTACGRLFQNVYVLKTHYQTAHLKL----------RYKCNFDGCRAAYSSRKGRDQHSGN 840
C+ C R++ +L H AH Y+C +GC + + K R +H
Sbjct: 173 CSVCSRVYPTSRLLSIHISEAHDSFFQAKVSRGYDMYECLVEGCGLKFKTYKARHRHL-- 230
Query: 841 VTLHR-KLSSDDFRVTDDSSKLLDKIRDQMELIASFKEEE 879
+ H+ + + F+ T S K +K+ Q + ++ K EE
Sbjct: 231 IDKHKFPTTFEFFKKTQLSKKRREKL--QRQHVSKLKHEE 268
>At1g17140.2 68414.m02089 tropomyosin-related similar to Tropomyosin
1. [Baker's yeast](SP:P17536) {Saccharomyces cerevisiae}
Length = 344
Score = 31.1 bits (67), Expect = 4.0
Identities = 26/114 (22%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 572 RSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQNRVPSEEEKVLDLK 631
RS +D E K+D+ ++LK + ++ + + G+ + +N++ ++ ++K
Sbjct: 156 RSGNDEAEKLVAKEDEI--KMLKARLYDME--KEHESLGKENESLKNQLSDSASEISNVK 211
Query: 632 RIKKEP-HHYERRTEEAETSITNKTHIKQEPTIVEEEPADMTYNVQNLRVKEEQ 684
+ E R EE E S H+K++ +EE + ++ LRV+ EQ
Sbjct: 212 ANEDEMVSKVSRIGEELEESRAKTAHLKEKLESMEEAKDALEAEMKKLRVQTEQ 265
>At1g17140.1 68414.m02088 tropomyosin-related similar to Tropomyosin
1. [Baker's yeast](SP:P17536) {Saccharomyces cerevisiae}
Length = 344
Score = 31.1 bits (67), Expect = 4.0
Identities = 26/114 (22%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 572 RSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQNRVPSEEEKVLDLK 631
RS +D E K+D+ ++LK + ++ + + G+ + +N++ ++ ++K
Sbjct: 156 RSGNDEAEKLVAKEDEI--KMLKARLYDME--KEHESLGKENESLKNQLSDSASEISNVK 211
Query: 632 RIKKEP-HHYERRTEEAETSITNKTHIKQEPTIVEEEPADMTYNVQNLRVKEEQ 684
+ E R EE E S H+K++ +EE + ++ LRV+ EQ
Sbjct: 212 ANEDEMVSKVSRIGEELEESRAKTAHLKEKLESMEEAKDALEAEMKKLRVQTEQ 265
>At5g16720.1 68418.m01958 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 675
Score = 30.7 bits (66), Expect = 5.3
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Query: 648 ETSITNKTHIKQEPTIVEEEPADM--TYNVQNLRVKEEQIERPETIKSSTPTNEHYSSEN 705
E I+ + K+E T V + D + N +++EE+ +R ET K P S
Sbjct: 260 EDQISGRVEEKEEETGVADLLYDQFESKNFTGSQIEEEEEDREETTKELDPETPTSVSTL 319
Query: 706 SLKRLESLSKGEFPEIPKKNDINAL 730
K+L L++ E+ D N L
Sbjct: 320 FNKKLHFLARNEYAAAEDAGDGNVL 344
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 30.7 bits (66), Expect = 5.3
Identities = 30/154 (19%), Positives = 56/154 (36%), Gaps = 3/154 (1%)
Query: 571 QRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQNRVPSEEEKVLDL 630
+R + E +++++ +RKR+ R + + + A+ EEE+ +
Sbjct: 468 KRREEEETERKKREEEEARKREEERKREEEEAKRREEERKKREEEAEQARKREEEREKEE 527
Query: 631 KRIKKEPHHYERRTEEAETSITNKTHIKQEPTIVEEEPADMTYNVQNLRVKEEQIERPET 690
+ KK +R+ E + K +QE EEE + ++ E+
Sbjct: 528 EMAKKREEERQRKERE---EVERKRREEQERKRREEEARKREEERKREEEMAKRREQERQ 584
Query: 691 IKSSTPTNEHYSSENSLKRLESLSKGEFPEIPKK 724
K E KR E ++K E KK
Sbjct: 585 RKEREEVERKIREEQERKREEEMAKRREQERQKK 618
Score = 30.3 bits (65), Expect = 7.1
Identities = 24/119 (20%), Positives = 45/119 (37%), Gaps = 2/119 (1%)
Query: 591 EVLKRKRKNLNPLRLQNNAGENDYLAQNRVPSEEEKVLDLKRIKKEPHHYERRTEEAETS 650
E+ +RKR+ + + E + EEE+ +R ++E +R EEA
Sbjct: 431 EIEERKRREEEEIERRRKEEEEARKREEAKRREEEEAK--RREEEETERKKREEEEARKR 488
Query: 651 ITNKTHIKQEPTIVEEEPADMTYNVQNLRVKEEQIERPETIKSSTPTNEHYSSENSLKR 709
+ ++E EEE + R +EE+ E+ E + ++R
Sbjct: 489 EEERKREEEEAKRREEERKKREEEAEQARKREEEREKEEEMAKKREEERQRKEREEVER 547
>At5g16780.1 68418.m01965 SART-1 family protein contains Pfam
domain, PF03343: SART-1 family
Length = 820
Score = 30.3 bits (65), Expect = 7.1
Identities = 38/154 (24%), Positives = 61/154 (39%), Gaps = 9/154 (5%)
Query: 564 DSETDCDQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQNRVPSE 623
+ E D D+ + + DD + +R + N R N G+N A + +
Sbjct: 117 EKEKDKDRARVKERASKKSHEDDDETHKAAERYEHSDN--RGLNEGGDNVDAASS---GK 171
Query: 624 EEKVLDLK-RIKKEPHHYERRTEEAETSITNKTHIKQEPTIVEEEPADMTYNVQNLRVKE 682
E LDL+ RI K E R ++AE + + + + I E+ A+ Q R+ E
Sbjct: 172 EASALDLQNRILKMR---EERKKKAEDASDALSWVARSRKIEEKRNAEKQRAQQLSRIFE 228
Query: 683 EQIERPETIKSSTPTNEHYSSENSLKRLESLSKG 716
EQ + EH S L LE + +G
Sbjct: 229 EQDNLNQGENEDGEDGEHLSGVKVLHGLEKVVEG 262
>At1g73960.1 68414.m08565 expressed protein similar to TATA binding
protein associated factor (GI:2827282) [Homo sapiens];
similar to Transcription initiation factor TFIID 150 kDa
subunit (TAFII-150) (TAFII150) (Swiss-Prot:Q24325)
[Drosophila melanogaster]
Length = 1390
Score = 30.3 bits (65), Expect = 7.1
Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 6/114 (5%)
Query: 563 EDSETDCDQRSNSDNNE--STDFKKDDSHSEVLKRKRKNLNPLRL-QNNAGENDYLAQNR 619
E + Q+++++N + D S ++K +L L + + + D + +
Sbjct: 1241 ESGKPSTSQKADNNNRTVPPSFLPLDHSMENEAQQKYASLQTLSIGKEKEKKKDKEKKEK 1300
Query: 620 VPSEEEKV-LDLKRIKKEPHHYERRTEEAETSITN--KTHIKQEPTIVEEEPAD 670
E+ V L+ KR+KKE E+ + +S T+ K I+ + EEEP+D
Sbjct: 1301 KRKREDPVYLEKKRLKKEKKRKEKEMAKLVSSTTDPAKKKIESVAEVKEEEPSD 1354
>At5g10490.1 68418.m01215 mechanosensitive ion channel
domain-containing protein / MS ion channel
domain-containing protein contains Pfam profile PF00924:
Mechanosensitive ion channel
Length = 519
Score = 29.9 bits (64), Expect = 9.3
Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 5/103 (4%)
Query: 570 DQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLAQNRVPSEEEKVLD 629
+ +S S N + + ++ K K + L+ GE+ N+VP E
Sbjct: 342 EDKSKSQNRAAKPTAEQENKGSNPKSKETSSPDLKANVKVGESPVSDTNKVPEETVAKPV 401
Query: 630 LKRIKKEPHHYERRTEEAETSITNKTHIKQEPTIVEEEPADMT 672
+K + K P ++ ETS T K K+ ++ D T
Sbjct: 402 IKAVSKPP-----TPKDTETSGTEKPKAKRSGGTIKSTKTDET 439
>At4g35590.1 68417.m05056 RWP-RK domain-containing protein low
similarity to minus dominance protein [Chlamydomonas
reinhardtii] GI:1928929; contains Pfam profile: PF02042
RWP-RK domain
Length = 370
Score = 29.9 bits (64), Expect = 9.3
Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 6/44 (13%)
Query: 561 CMEDSETDCDQRSNSDN------NESTDFKKDDSHSEVLKRKRK 598
C+ DSET+ ++ N N+ T+ + D+ +E+LK+K++
Sbjct: 190 CLPDSETESEESVNEKTEHSEFENDKTEQSESDAKTEILKKKKR 233
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 29.9 bits (64), Expect = 9.3
Identities = 18/100 (18%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Query: 629 DLKRIKKEPHHYERRTEEAETSITNKTHIKQEPTIVEEEPADM-TYNVQNLRVKEEQIER 687
D++ I + +H++RR + + +++ + + + + E + ++ +N R+ + +R
Sbjct: 874 DVENIHESSYHWKRRRKHPKVNVSTSSGRRDKRILDENDSSNSGIKRTKNRRIVVKASKR 933
Query: 688 PET-IKSSTPTNEHYSSENSLKRLESLSKGEFPEIPKKND 726
+ +K+S P + +++N+ L +S E+ ND
Sbjct: 934 KHSDVKASRP--QRAAAQNARSLLSKISGSSSDEVDDDND 971
>At2g01100.3 68415.m00018 expressed protein
Length = 247
Score = 29.9 bits (64), Expect = 9.3
Identities = 20/103 (19%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Query: 557 NKSYCMEDSETDCDQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLA 616
++S DS ++ ++S +N+ DS ++++K+ R ++ + +D
Sbjct: 59 SESSSESDSSSEVRRKSRRSHNKHRRHAHSDSDDSDRRKEKKSRRQKR-RSLSPSDDSTG 117
Query: 617 QNRVPSEEEKVLDLKRIKKEPHHYERRT-EEAETSITNKTHIK 658
SE+E + +K ++ H R+T ++ T + H+K
Sbjct: 118 DYESGSEDELRMKIKHHRRHKWHSSRKTCDDDSTEDVRRKHLK 160
>At2g01100.2 68415.m00017 expressed protein
Length = 247
Score = 29.9 bits (64), Expect = 9.3
Identities = 20/103 (19%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Query: 557 NKSYCMEDSETDCDQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLA 616
++S DS ++ ++S +N+ DS ++++K+ R ++ + +D
Sbjct: 59 SESSSESDSSSEVRRKSRRSHNKHRRHAHSDSDDSDRRKEKKSRRQKR-RSLSPSDDSTG 117
Query: 617 QNRVPSEEEKVLDLKRIKKEPHHYERRT-EEAETSITNKTHIK 658
SE+E + +K ++ H R+T ++ T + H+K
Sbjct: 118 DYESGSEDELRMKIKHHRRHKWHSSRKTCDDDSTEDVRRKHLK 160
>At2g01100.1 68415.m00016 expressed protein
Length = 247
Score = 29.9 bits (64), Expect = 9.3
Identities = 20/103 (19%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Query: 557 NKSYCMEDSETDCDQRSNSDNNESTDFKKDDSHSEVLKRKRKNLNPLRLQNNAGENDYLA 616
++S DS ++ ++S +N+ DS ++++K+ R ++ + +D
Sbjct: 59 SESSSESDSSSEVRRKSRRSHNKHRRHAHSDSDDSDRRKEKKSRRQKR-RSLSPSDDSTG 117
Query: 617 QNRVPSEEEKVLDLKRIKKEPHHYERRT-EEAETSITNKTHIK 658
SE+E + +K ++ H R+T ++ T + H+K
Sbjct: 118 DYESGSEDELRMKIKHHRRHKWHSSRKTCDDDSTEDVRRKHLK 160
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.314 0.129 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,615,067
Number of Sequences: 28952
Number of extensions: 978930
Number of successful extensions: 2964
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 2868
Number of HSP's gapped (non-prelim): 119
length of query: 1054
length of database: 12,070,560
effective HSP length: 89
effective length of query: 965
effective length of database: 9,493,832
effective search space: 9161547880
effective search space used: 9161547880
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 64 (29.9 bits)
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