GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001409-TA|BGIBMGA001409-PA|undefined
         (69 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5K845 Cluster: Putative uncharacterized protein; n=2; ...    31   4.6  
UniRef50_A7T0T7 Cluster: Predicted protein; n=2; Nematostella ve...    30   8.0  

>UniRef50_A5K845 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 952

 Score = 31.1 bits (67), Expect = 4.6
 Identities = 15/44 (34%), Positives = 25/44 (56%)

Query: 3   KGDESLERLIVVGNTEGKGHGAKHQLKGEEPPQKFYDVVTDVTD 46
           K  E  E+ +  GN +GK  G + +L+ ++ PQ+  D V D +D
Sbjct: 65  KQKEHKEKSLQNGNAKGKSSGREKKLRKKDAPQEDSDSVGDFSD 108


>UniRef50_A7T0T7 Cluster: Predicted protein; n=2; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 425

 Score = 30.3 bits (65), Expect = 8.0
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 4   GDESLERLIVVGNTEG-KGHGAKHQLKGEEPPQKFYDVVTDVTDRN 48
           GD S   +I+   T G +G   KHQ K E+ P K+  ++ D  D++
Sbjct: 168 GDTSNAWMILTRLTSGQRGKYKKHQKKAEQQPDKYPSLIIDGMDQS 213


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.315    0.137    0.424 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,191,729
Number of Sequences: 1657284
Number of extensions: 3152792
Number of successful extensions: 4295
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4294
Number of HSP's gapped (non-prelim): 2
length of query: 69
length of database: 575,637,011
effective HSP length: 48
effective length of query: 21
effective length of database: 496,087,379
effective search space: 10417834959
effective search space used: 10417834959
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 65 (30.3 bits)