GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001409-TA|BGIBMGA001409-PA|undefined
         (69 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4835|AAN14298.1|  436|Drosophila melanogaster CG31001-P...    28   1.4  

>AE014297-4835|AAN14298.1|  436|Drosophila melanogaster CG31001-PA
          protein.
          Length = 436

 Score = 28.3 bits (60), Expect = 1.4
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 16 NTEGKGHGAKHQLKGEEPPQKFYDVVTDVTDRNGWCEYVRATR 58
          + EG+G   K ++ G E  +  Y++ TD     GW  Y    R
Sbjct: 45 HVEGQGKTRKAKINGRERHRAQYEIGTDCQIDTGWTGYFSIPR 87



 Score = 28.3 bits (60), Expect = 1.4
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 16  NTEGKGHGAKHQLKGEEPPQKFYDVVTDVTDRNGWCEYVRATR 58
           + EG+G   K ++ G E  +  Y++ TD     GW  Y    R
Sbjct: 139 HVEGQGKTRKAKINGRERHRAQYEIGTDCQIDTGWTGYFSIPR 181



 Score = 28.3 bits (60), Expect = 1.4
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 16  NTEGKGHGAKHQLKGEEPPQKFYDVVTDVTDRNGWCEYVRATR 58
           + EG+G   K ++ G E  +  Y++ TD     GW  Y    R
Sbjct: 327 HVEGQGKTRKAKINGRERHRAQYEIGTDCQIDTGWTGYFSIPR 369


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.315    0.137    0.424 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,081,068
Number of Sequences: 52641
Number of extensions: 145090
Number of successful extensions: 199
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 195
Number of HSP's gapped (non-prelim): 4
length of query: 69
length of database: 24,830,863
effective HSP length: 49
effective length of query: 20
effective length of database: 22,251,454
effective search space: 445029080
effective search space used: 445029080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 53 (25.4 bits)