GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001409-TA|BGIBMGA001409-PA|undefined
         (69 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    22   0.59 
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    22   0.59 
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    22   0.59 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              19   5.5  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    18   9.7  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2
          protein.
          Length = 162

 Score = 22.2 bits (45), Expect = 0.59
 Identities = 11/24 (45%), Positives = 12/24 (50%)

Query: 2  RKGDESLERLIVVGNTEGKGHGAK 25
          R GD  LE  I+   T   GHG K
Sbjct: 19 RIGDNELEERIIYPGTLWCGHGNK 42


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
          protein.
          Length = 167

 Score = 22.2 bits (45), Expect = 0.59
 Identities = 11/24 (45%), Positives = 12/24 (50%)

Query: 2  RKGDESLERLIVVGNTEGKGHGAK 25
          R GD  LE  I+   T   GHG K
Sbjct: 24 RIGDNELEERIIYPGTLWCGHGNK 47


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
          protein.
          Length = 167

 Score = 22.2 bits (45), Expect = 0.59
 Identities = 11/24 (45%), Positives = 12/24 (50%)

Query: 2  RKGDESLERLIVVGNTEGKGHGAK 25
          R GD  LE  I+   T   GHG K
Sbjct: 24 RIGDNELEERIIYPGTLWCGHGNK 47


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 19.0 bits (37), Expect = 5.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query: 11   LIVVGNTEGKGHGA 24
            +IV+    GKGHG+
Sbjct: 1602 VIVICVLRGKGHGS 1615


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 9/20 (45%), Positives = 10/20 (50%)

Query: 5   DESLERLIVVGNTEGKGHGA 24
           DE  E  +VV    G G GA
Sbjct: 359 DEEEEEEVVVVGRNGAGVGA 378


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.315    0.137    0.424 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,598
Number of Sequences: 429
Number of extensions: 668
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 69
length of database: 140,377
effective HSP length: 45
effective length of query: 24
effective length of database: 121,072
effective search space:  2905728
effective search space used:  2905728
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.8 bits)
S2: 35 (18.2 bits)