Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001408-TA|BGIBMGA001408-PA|IPR007087|Zinc finger,
C2H2-type
(703 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 33 0.007
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 29 0.11
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 27 0.44
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 27 0.58
AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esteras... 26 0.77
AJ850290-1|CAH64510.1| 533|Tribolium castaneum putative esteras... 26 0.77
AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esteras... 26 0.77
AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esteras... 26 0.77
AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esteras... 26 0.77
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 25 1.3
L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protei... 25 1.3
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 25 1.8
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 25 1.8
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 25 1.8
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 25 2.3
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 25 2.3
L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protei... 23 5.4
DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 23 7.1
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 33.1 bits (72), Expect = 0.007
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 6/43 (13%)
Query: 81 TGKKRVQCNVCLKTFCDKGALKSHFSAVH-----LREMHKCTV 118
TG++ +C +C + F KG LK+H VH +R +H+C V
Sbjct: 158 TGERPFKCKICGRAFTTKGNLKTHM-GVHRAKPPMRVLHQCPV 199
Score = 29.9 bits (64), Expect = 0.062
Identities = 35/185 (18%), Positives = 67/185 (36%), Gaps = 16/185 (8%)
Query: 347 DEEYQGDLFRNLSTPGSSRADDEPLSLKKQKPEDLLTFRNGEEIAVDTESLTRVKAXXXX 406
D +Y + +PG +++ + +PE+L N + + + R+ A
Sbjct: 4 DSKYSNEDTLGARSPGGDHSEN-----MQDEPENLSNKSNSITVPLSISTGQRLPANFSF 58
Query: 407 XXXXXAPSVVREGLRLRSDLYTPSDSGSDLHAMEERLTRARSPSASSDR----TDERDVN 462
PS G + D D L R S S + T + +
Sbjct: 59 GQVNSPPSSTSSGSLGQFPATPVIDPAKDPAIYSNLLPRPGSNDNSWESLIEVTKTSETS 118
Query: 463 ELEIPIDD-----ENPDRCTACGKIFQNHFTLRMHYRNDHLKLLHPCDVNGCDAAFPSRR 517
+L+ +D+ +P++C C ++ L+MHYR + C + C AF ++
Sbjct: 119 KLQQLVDNIEHKLSDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKI--CGRAFTTKG 176
Query: 518 SRDRH 522
+ H
Sbjct: 177 NLKTH 181
Score = 23.0 bits (47), Expect = 7.1
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 87 QCNVCLKTFCDKGALKSHFSAVHLREMHKCTVEG 120
QC +C + K AL+ H+ KC + G
Sbjct: 136 QCVICHRVLSCKSALQMHYRTHTGERPFKCKICG 169
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 29.1 bits (62), Expect = 0.11
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 449 PSASSDRTDERDVNELEIPIDDENPDRCTACGKIFQNHFTLRMHYR 494
P + S +N LE D++ P+ C CGK + TL+ H R
Sbjct: 227 PMSFSSPRRRHSINLLEE--DNQKPNVCRICGKSYARPSTLKTHLR 270
Score = 27.1 bits (57), Expect = 0.44
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Query: 471 ENPDRCTACGKIFQNHFTLRMHYRNDHLKLLHPCDVNGCDAAFPSRRSRDRH 522
E P RC C K F L H R + C V CD F S H
Sbjct: 275 EKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPV--CDRRFSQSSSVTTH 324
Score = 27.1 bits (57), Expect = 0.44
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Query: 471 ENPDRCTACGKIFQNHFTLRMHYRNDHLKLLHPCDVNGCDAAFPSRRSRDRH 522
E P RC C K F + TL H R + + C + C F + +RH
Sbjct: 331 ERPYRCRLCKKAFSDSSTLTKHLRIHSGEKPYECKL--CLLRFSQSGNLNRH 380
Score = 26.2 bits (55), Expect = 0.77
Identities = 11/45 (24%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 81 TGKKRVQCNVCLKTFCDKGALKSHFSAVHLREMHKCTVEGCTMMF 125
+G++ +C +C K F D L H + ++C + C + F
Sbjct: 329 SGERPYRCRLCKKAFSDSSTLTKHLRIHSGEKPYECKL--CLLRF 371
Score = 25.0 bits (52), Expect = 1.8
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 81 TGKKRVQCNVCLKTFCDKGALKSH 104
+G+K +C +CL F G L H
Sbjct: 357 SGEKPYECKLCLLRFSQSGNLNRH 380
Score = 24.6 bits (51), Expect = 2.3
Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Query: 471 ENPDRCTACGKIFQNHFTLRMHYRNDHLKLLHPCDVNGCDAAFPSRRSRDRH 522
E P RC C + F ++ H R + + C + C AF + +H
Sbjct: 303 EKPFRCPVCDRRFSQSSSVTTHMRTHSGERPYRCRL--CKKAFSDSSTLTKH 352
Score = 22.6 bits (46), Expect = 9.4
Identities = 9/40 (22%), Positives = 18/40 (45%)
Query: 77 VNPATGKKRVQCNVCLKTFCDKGALKSHFSAVHLREMHKC 116
V +G+K +C VC + F ++ +H ++C
Sbjct: 297 VRTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPYRC 336
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 27.1 bits (57), Expect = 0.44
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Query: 471 ENPDRCTACGKIFQNHFTLRMHYRNDHLKLLHPCDVNGCDAAFPSRRSRDRH 522
E P RC C K F L H R + C V CD F S H
Sbjct: 19 EKPYRCIDCNKSFSQAANLTAHVRTHSGEKPFRCPV--CDRRFSQSSSVTTH 68
Score = 27.1 bits (57), Expect = 0.44
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Query: 471 ENPDRCTACGKIFQNHFTLRMHYRNDHLKLLHPCDVNGCDAAFPSRRSRDRH 522
E P RC C K F + TL H R + + C + C F + +RH
Sbjct: 75 ERPYRCRLCKKAFSDSSTLTKHLRIHSGEKPYECKL--CLLRFSQSGNLNRH 124
Score = 26.2 bits (55), Expect = 0.77
Identities = 11/45 (24%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 81 TGKKRVQCNVCLKTFCDKGALKSHFSAVHLREMHKCTVEGCTMMF 125
+G++ +C +C K F D L H + ++C + C + F
Sbjct: 73 SGERPYRCRLCKKAFSDSSTLTKHLRIHSGEKPYECKL--CLLRF 115
Score = 25.0 bits (52), Expect = 1.8
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 81 TGKKRVQCNVCLKTFCDKGALKSH 104
+G+K +C +CL F G L H
Sbjct: 101 SGEKPYECKLCLLRFSQSGNLNRH 124
Score = 24.6 bits (51), Expect = 2.3
Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
Query: 471 ENPDRCTACGKIFQNHFTLRMHYRNDHLKLLHPCDVNGCDAAFPSRRSRDRH 522
E P RC C + F ++ H R + + C + C AF + +H
Sbjct: 47 EKPFRCPVCDRRFSQSSSVTTHMRTHSGERPYRCRL--CKKAFSDSSTLTKH 96
Score = 22.6 bits (46), Expect = 9.4
Identities = 9/40 (22%), Positives = 18/40 (45%)
Query: 77 VNPATGKKRVQCNVCLKTFCDKGALKSHFSAVHLREMHKC 116
V +G+K +C VC + F ++ +H ++C
Sbjct: 41 VRTHSGEKPFRCPVCDRRFSQSSSVTTHMRTHSGERPYRC 80
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 26.6 bits (56), Expect = 0.58
Identities = 11/23 (47%), Positives = 12/23 (52%)
Query: 470 DENPDRCTACGKIFQNHFTLRMH 492
DE P C CGK F+ LR H
Sbjct: 104 DERPYSCDICGKAFRRQDHLRDH 126
Score = 23.0 bits (47), Expect = 7.1
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 476 CTACGKIFQNHFTLRMHYRNDHLKLLHPCDVNGCDAAF 513
C C + F + L +H R + + CD+ C AF
Sbjct: 82 CKYCNRQFTKSYNLLIHERTHTDERPYSCDI--CGKAF 117
>AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 26.2 bits (55), Expect = 0.77
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 342 EYSVSDEEYQGDLFRNLSTPGSSRADDEPLSLKK 375
E VS + G LF NL TP DE +++K+
Sbjct: 430 EPGVSHADDLGYLFTNLLTPDIEEGSDEDIAVKR 463
>AJ850290-1|CAH64510.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 26.2 bits (55), Expect = 0.77
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 342 EYSVSDEEYQGDLFRNLSTPGSSRADDEPLSLKK 375
E VS + G LF NL TP DE +++K+
Sbjct: 430 EPGVSHADDLGYLFTNLLTPDIEEGSDEDIAVKR 463
>AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 26.2 bits (55), Expect = 0.77
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 342 EYSVSDEEYQGDLFRNLSTPGSSRADDEPLSLKK 375
E VS + G LF NL TP DE +++K+
Sbjct: 430 EPGVSHADDLGYLFTNLLTPDIEEGSDEDIAVKR 463
>AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esterase
protein.
Length = 510
Score = 26.2 bits (55), Expect = 0.77
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 342 EYSVSDEEYQGDLFRNLSTPGSSRADDEPLSLKK 375
E VS + G LF NL TP DE +++K+
Sbjct: 430 EPGVSHADDLGYLFTNLLTPDIEEGSDEDIAVKR 463
>AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esterase
protein.
Length = 509
Score = 26.2 bits (55), Expect = 0.77
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 342 EYSVSDEEYQGDLFRNLSTPGSSRADDEPLSLKK 375
E VS + G LF NL TP DE +++K+
Sbjct: 429 EPGVSHADDLGYLFTNLLTPDIEEGSDEDIAVKR 462
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 25.4 bits (53), Expect = 1.3
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 82 GKKRVQCNVCLKTFCDKGALKSHFSA 107
G K QCN C T +K L SH +
Sbjct: 255 GSKPFQCNKCDYTCVNKSMLNSHMKS 280
>L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protein
protein.
Length = 69
Score = 25.4 bits (53), Expect = 1.3
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 82 GKKRVQCNVCLKTFCDKGALKSHFSA 107
G K QCN C T +K L SH +
Sbjct: 13 GSKPFQCNKCDYTCVNKSMLNSHMKS 38
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 25.0 bits (52), Expect = 1.8
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Query: 81 TGKKRVQCNVCLKTFCDKGALKSHFSAVHLREMHKCTVEGCTMMF 125
TG+K +C C K F LK+H ++C E C F
Sbjct: 5 TGEKPFECQECHKRFTRDHHLKTHMRLHTGERPYRC--EHCDRQF 47
Score = 23.4 bits (48), Expect = 5.4
Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Query: 471 ENPDRCTACGKIFQNHFTLRMHYRNDHLKLLHPCDVNGCDAAFPSRRSRDRH 522
E P C C K F L+ H R + + C+ CD F + RH
Sbjct: 7 EKPFECQECHKRFTRDHHLKTHMRLHTGERPYRCE--HCDRQFVQVANLRRH 56
Score = 22.6 bits (46), Expect = 9.4
Identities = 10/24 (41%), Positives = 11/24 (45%)
Query: 471 ENPDRCTACGKIFQNHFTLRMHYR 494
E P RC C + F LR H R
Sbjct: 35 ERPYRCEHCDRQFVQVANLRRHLR 58
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
protein.
Length = 1156
Score = 25.0 bits (52), Expect = 1.8
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 81 TGKKRVQCNVCLKTFCDKGALKSHFSAVH 109
T ++C C F KGA + H S +H
Sbjct: 1049 TSDSIMKCAFCDTPFISKGAYRHHLSKMH 1077
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 25.0 bits (52), Expect = 1.8
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Query: 81 TGKKRVQCNVCLKTFCDKGALKSHFSAVHLREMHKCTVEGCTMMF 125
TG+K +C C K F LK+H ++C E C F
Sbjct: 158 TGEKPFECQECHKRFTRDHHLKTHMRLHTGERPYRC--EHCDRQF 200
Score = 24.2 bits (50), Expect = 3.1
Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 81 TGKKRVQCNVCLKTFCDKGALKSHFSAVHLRE 112
TG++ C C F D LK+H +H E
Sbjct: 214 TGERPYGCEHCSMKFSDSNQLKAHV-LIHTNE 244
Score = 23.4 bits (48), Expect = 5.4
Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Query: 471 ENPDRCTACGKIFQNHFTLRMHYRNDHLKLLHPCDVNGCDAAFPSRRSRDRH 522
E P C C K F L+ H R + + C+ CD F + RH
Sbjct: 160 EKPFECQECHKRFTRDHHLKTHMRLHTGERPYRCE--HCDRQFVQVANLRRH 209
Score = 22.6 bits (46), Expect = 9.4
Identities = 10/24 (41%), Positives = 11/24 (45%)
Query: 471 ENPDRCTACGKIFQNHFTLRMHYR 494
E P RC C + F LR H R
Sbjct: 188 ERPYRCEHCDRQFVQVANLRRHLR 211
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 24.6 bits (51), Expect = 2.3
Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 3/96 (3%)
Query: 271 SLNIERHNYDDEPEDLSV-NKKRDSGDNKTALVKSETSSNRSEPPT--ALDDKASVPNKR 327
S NI+ ++ + LSV N+ D + E+ N T LD P+
Sbjct: 11 SPNIDHNSCSSDDTVLSVGNENPPPEDTPLSFKNIESHLNAISQITNSTLDPGRKSPSSP 70
Query: 328 KRKSGNPTRCSQNNEYSVSDEEYQGDLFRNLSTPGS 363
+ S + T+ + + + DLFR STP S
Sbjct: 71 RISSPSSTKSGSPGFLTYTKADRDVDLFRGSSTPES 106
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 24.6 bits (51), Expect = 2.3
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 81 TGKKRVQCNVCLKTFCDKGALKSH 104
TG+KR C +C K F L H
Sbjct: 370 TGEKRFACPICNKRFMRSDHLAKH 393
Score = 23.4 bits (48), Expect = 5.4
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 328 KRKSGNPTRCSQNNEYSVSDEEYQGDLFRNLSTPGSSRADDEP 370
K +GN + S ++ S S+E Q D+ N+++P S P
Sbjct: 395 KTHNGNGKKGSSDS-CSDSEENSQSDITNNVNSPASMNQTPPP 436
>L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protein
protein.
Length = 46
Score = 23.4 bits (48), Expect = 5.4
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 473 PDRCTACGKIFQNHFTLRMHYR 494
P +CT C K F + L+ H R
Sbjct: 7 PCKCTICPKAFSRPWLLQGHIR 28
>DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 596
Score = 23.0 bits (47), Expect = 7.1
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 97 DKGALKSHFSAVHLREMHKC 116
+K +S F +HL +HKC
Sbjct: 75 EKILTQSSFECIHLSVLHKC 94
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.314 0.131 0.383
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,824
Number of Sequences: 317
Number of extensions: 5911
Number of successful extensions: 44
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 42
length of query: 703
length of database: 114,650
effective HSP length: 62
effective length of query: 641
effective length of database: 94,996
effective search space: 60892436
effective search space used: 60892436
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 46 (22.6 bits)
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