Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001408-TA|BGIBMGA001408-PA|IPR007087|Zinc finger,
C2H2-type
(703 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_02_0023 + 4306350-4306908,4308429-4308814,4308917-4308991,430... 35 0.19
03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524 35 0.19
04_04_1098 + 30876785-30876835,30876846-30877171,30877396-308774... 34 0.34
02_05_0694 - 30984408-30985160,30985357-30985487,30985586-30985853 34 0.44
04_01_0617 - 8076624-8076971,8077761-8077883,8077965-8078035,807... 33 1.0
02_04_0223 + 21047240-21047304,21047577-21047706,21048783-210488... 33 1.0
12_02_1093 + 26023692-26023865,26023959-26024026,26024155-260241... 32 1.8
05_01_0042 - 290077-290676,291093-291233,291675-291764,292364-29... 32 1.8
10_08_0198 + 15688142-15690427,15690524-15690607,15691232-156913... 31 2.4
02_04_0194 + 20820985-20821027,20822168-20822367,20822477-208225... 31 2.4
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 31 2.4
02_01_0113 - 854108-854302,854399-854542,854658-854893,855036-85... 31 3.1
12_02_0641 + 21450262-21450603,21450691-21450963,21451600-214518... 31 4.1
12_02_0638 + 21439600-21439941,21440029-21440301,21440938-214412... 31 4.1
05_07_0357 - 29533496-29533556,29533638-29533770,29533857-295339... 31 4.1
05_05_0315 - 24030695-24030787,24030896-24030995,24031120-240312... 31 4.1
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 31 4.1
11_03_0183 - 11310671-11313625,11314243-11314287,11314550-11314717 30 5.5
09_06_0147 + 21195222-21195377,21195471-21195522,21196842-212043... 30 5.5
09_01_0084 + 1202545-1202755,1202797-1203488 30 5.5
08_02_0705 - 20204351-20204833 30 5.5
08_01_0998 - 10136050-10138356 30 5.5
06_03_1246 + 28667511-28667750,28667846-28668037,28669145-286693... 30 5.5
11_04_0118 + 13624086-13625120 30 7.2
06_01_1048 + 8252404-8252517,8255799-8256266 30 7.2
04_04_0198 + 23502657-23502900,23505228-23505298,23505690-235057... 30 7.2
04_01_0154 - 1775693-1775942,1776834-1777588 30 7.2
02_04_0242 + 21210062-21210541 30 7.2
11_06_0710 - 26492093-26493460 29 9.6
10_08_0583 - 18952168-18952263,18953663-18953740,18954006-189540... 29 9.6
10_01_0129 + 1535823-1537196 29 9.6
08_02_1264 + 25706009-25706148,25706613-25706716,25707108-257072... 29 9.6
07_01_0608 + 4515709-4515951,4516085-4516678 29 9.6
06_03_0813 - 24853119-24854480,24854711-24855442,24855556-248559... 29 9.6
04_03_0662 + 18479279-18479406,18480445-18480509,18480603-184808... 29 9.6
03_06_0568 - 34778408-34778710,34779340-34779411,34779549-347796... 29 9.6
03_04_0188 - 18241815-18242477 29 9.6
03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776 29 9.6
>10_02_0023 +
4306350-4306908,4308429-4308814,4308917-4308991,
4309330-4309539,4309649-4309961,4310035-4310130,
4310220-4310357,4310436-4310536,4310645-4310712,
4310800-4310849,4311790-4311848,4312399-4312530
Length = 728
Score = 35.1 bits (77), Expect = 0.19
Identities = 16/69 (23%), Positives = 34/69 (49%)
Query: 280 DDEPEDLSVNKKRDSGDNKTALVKSETSSNRSEPPTALDDKASVPNKRKRKSGNPTRCSQ 339
D+EPE+L + ++ + ++ E S SE A DD + +K ++ + +
Sbjct: 148 DEEPEELEMEEEEPEDADSEESMEEEAGSEVSEEEAAADDMKEIADKDSEEAQDEDKHGD 207
Query: 340 NNEYSVSDE 348
N++ V+D+
Sbjct: 208 NHKGEVADQ 216
>03_01_0342 - 2695323-2697007,2697134-2697248,2697369-2697524
Length = 651
Score = 35.1 bits (77), Expect = 0.19
Identities = 17/61 (27%), Positives = 27/61 (44%)
Query: 462 NELEIPIDDENPDRCTACGKIFQNHFTLRMHYRNDHLKLLHPCDVNGCDAAFPSRRSRDR 521
N E+ + +N +CG+ F++H LR H + + + C GC AF R
Sbjct: 553 NRAELSVHKKNTCTVKSCGRHFRSHKYLRRHQSIHNDDMPYKCPWEGCSMAFKWSWDRGE 612
Query: 522 H 522
H
Sbjct: 613 H 613
>04_04_1098 +
30876785-30876835,30876846-30877171,30877396-30877418,
30877687-30879392
Length = 701
Score = 34.3 bits (75), Expect = 0.34
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 277 HNYDDEPEDLSVNKKRDSGDN----KTALVKSETSSNRSEPPTALDDKASVPNKRKRKSG 332
+++ D+P K+ +SG N K S++ S+ E LD +AS+ ++KR
Sbjct: 533 YHHSDKPAQRGKEKEENSGKNVDKRKRHDTDSDSDSHARERKRHLDARASLAAQKKRSVT 592
Query: 333 NPTRCSQNNEYSVSDE 348
+ + S++++YS S +
Sbjct: 593 SSSESSESSDYSSSSD 608
>02_05_0694 - 30984408-30985160,30985357-30985487,30985586-30985853
Length = 383
Score = 33.9 bits (74), Expect = 0.44
Identities = 21/79 (26%), Positives = 35/79 (44%)
Query: 531 RLLSTNSPDGREQRPAFEVNADLLNKLYADIKGLATTLESLRYNGNEEATQFPSYVTETM 590
+++S DG + DLL+K I L + N A+Q PS+ + +
Sbjct: 153 KMMSNGGGDGNSSSASASAIDDLLSKSLFLISDGGNDLFAFLRQSNRTASQVPSFYADLL 212
Query: 591 KFYSRNLTALQAGMFPRFG 609
Y+R++ AL + RFG
Sbjct: 213 SNYTRHVQALYSLGARRFG 231
>04_01_0617 -
8076624-8076971,8077761-8077883,8077965-8078035,
8078108-8078360,8078613-8078768,8078854-8079770,
8079858-8079927,8082310-8082416,8082722-8082755,
8083621-8083940,8084031-8084820,8084890-8085046,
8085647-8086068
Length = 1255
Score = 32.7 bits (71), Expect = 1.0
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 303 KSETSSNRSEPPTALDDKASVPNKRKRKSGNPTRCSQ-NNEYSVSDEEYQGDLFRNLSTP 361
KSE+S +R+ + K VP+ K G+ T S N + V E+ Q + P
Sbjct: 819 KSESSQDRTRSSDKVQLKGFVPSAPKSSQGSRTYVSSAKNRFIVPKEQLQKTSTEGNAPP 878
Query: 362 GSSRADDEPL-SLKKQKP 378
GS + + PL S K P
Sbjct: 879 GSLQGEVAPLHSRNKAMP 896
>02_04_0223 +
21047240-21047304,21047577-21047706,21048783-21048871,
21049592-21049647,21049721-21049776,21050163-21050202,
21050505-21050629,21050715-21050808,21051401-21051480,
21051598-21051640,21057539-21057630,21057746-21057919
Length = 347
Score = 32.7 bits (71), Expect = 1.0
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 641 RESMSPLSASSPPVISPGRLDAANARPREDAKLLFRE 677
R +M+ L SS PV+SP RL AAN + K E
Sbjct: 2 RSAMTRLIRSSSPVVSPSRLSAANLLKNNNGKAFLSE 38
>12_02_1093 +
26023692-26023865,26023959-26024026,26024155-26024198,
26024287-26025035,26025506-26025595,26026174-26026235,
26026360-26026465
Length = 430
Score = 31.9 bits (69), Expect = 1.8
Identities = 23/105 (21%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Query: 266 DNNIRSLNIERHNYDDEPEDLSV-NKKR--DSGDNKTALVKSETSSNRSEPPTALDDKAS 322
D N + E+ P D +V KKR + + K + ++++ + +D +
Sbjct: 275 DENNSGMETEKGENGMPPSDNAVVGKKRKLEEVEGSNLPAKEDNTASQKLSNGSSEDDGA 334
Query: 323 VPNKRKRKSGNPTRCSQNNEYSVSDEEYQGDLFRNLSTPGSSRAD 367
PNKR++KS P + + D ++ D ++ S AD
Sbjct: 335 KPNKRQKKSSEPKTVNAFQRVKLEDVKFADDRLQDNSYWAKGGAD 379
>05_01_0042 -
290077-290676,291093-291233,291675-291764,292364-292563,
292685-292743,292827-292942
Length = 401
Score = 31.9 bits (69), Expect = 1.8
Identities = 15/44 (34%), Positives = 17/44 (38%)
Query: 479 CGKIFQNHFTLRMHYRNDHLKLLHPCDVNGCDAAFPSRRSRDRH 522
CGK F F LR H + L+ H C C F S H
Sbjct: 153 CGKAFSLDFNLRSHLKTHALENYHVCPFPACGKRFTSDSKLKSH 196
>10_08_0198 +
15688142-15690427,15690524-15690607,15691232-15691336,
15691420-15691528,15693037-15693188,15693278-15693583
Length = 1013
Score = 31.5 bits (68), Expect = 2.4
Identities = 25/102 (24%), Positives = 41/102 (40%), Gaps = 1/102 (0%)
Query: 266 DNNIRSLNIERHNYDDEPEDLSVNKKRDSGDNKTALVKSETSSNRSEPPTALDDKASVPN 325
D RS R+ YDDE ++ + +R+S +K E S R D+ +
Sbjct: 36 DRKNRSGKSTRYIYDDEGDEDDYDVRRESRVSKVPRRSPEERSER-RLSDGYKDRDGDSS 94
Query: 326 KRKRKSGNPTRCSQNNEYSVSDEEYQGDLFRNLSTPGSSRAD 367
+R+R+ N S+ + S + R+ S RAD
Sbjct: 95 RRRREDNNDWDSSRRSGSRTSGHDVSRSKSRSSDRTSSDRAD 136
>02_04_0194 +
20820985-20821027,20822168-20822367,20822477-20822566,
20822820-20822825,20822866-20823009,20823089-20823580
Length = 324
Score = 31.5 bits (68), Expect = 2.4
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 91 CLKTFCDKGALKSHFSAVHLREMHKCTVEGCTMMF 125
C KTF D GAL+ H + VH + C GC F
Sbjct: 50 CGKTFVDAGALRKH-AHVHGERQYVCHYAGCDKKF 83
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 31.5 bits (68), Expect = 2.4
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 298 KTALVKSETSSNRS-EPPTALDDKASVPNKRKRK--SGNPTRCSQNNEYSVSDEEYQGDL 354
K+ L K E+S + E K S +RK+K S + + S +E +SD + + D
Sbjct: 197 KSKLSKDESSDEENNEGKRKRHHKKSSRRRRKKKRYSSSESESSSESESELSDSDSESDT 256
Query: 355 FRNLSTPGSSRADDEPLSLKKQKPED 380
+ S+ SS +DD K+ +D
Sbjct: 257 CSSDSSDLSSSSDDRRRRRKRHSKKD 282
>02_01_0113 -
854108-854302,854399-854542,854658-854893,855036-855315,
856891-857031,857259-857372
Length = 369
Score = 31.1 bits (67), Expect = 3.1
Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Query: 465 EIPIDDENPDRCTACGKIFQNHFTLRMHYRNDHLKLL-HPCDVNGCDAAFPSRRSRDRHS 523
E+P + C F N L H + H ++ C GC+ FP + RD H
Sbjct: 237 EVPSTERIKCSFEGCECSFSNKSNLTKHIKASHDQVKPFACRFTGCEKVFPYKHVRDNHE 296
Query: 524 SN 525
+
Sbjct: 297 KS 298
>12_02_0641 +
21450262-21450603,21450691-21450963,21451600-21451869,
21452071-21452368,21452455-21452921
Length = 549
Score = 30.7 bits (66), Expect = 4.1
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 302 VKSETSSNRSEPPTALDDKASVPNKRKRKSGNPTRCSQNNEYSVSDEEYQGDL 354
+ ET + + V +K KSG+ S ++E SDEEY+ DL
Sbjct: 171 IDEETEDDEPSAKRKRGGGSKVDKSKKSKSGSQKMMSSDSEDGSSDEEYEFDL 223
>12_02_0638 +
21439600-21439941,21440029-21440301,21440938-21441207,
21441409-21441706,21441793-21442259
Length = 549
Score = 30.7 bits (66), Expect = 4.1
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 302 VKSETSSNRSEPPTALDDKASVPNKRKRKSGNPTRCSQNNEYSVSDEEYQGDL 354
+ ET + + V +K KSG+ S ++E SDEEY+ DL
Sbjct: 171 IDEETEDDEPSAKRKRGGGSKVDKSKKSKSGSQKMMSSDSEDGSSDEEYEFDL 223
>05_07_0357 -
29533496-29533556,29533638-29533770,29533857-29533953,
29534073-29534141,29534221-29534378,29534483-29534527,
29534598-29534625
Length = 196
Score = 30.7 bits (66), Expect = 4.1
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 78 NPATGKKRVQCNVCLKTFCDKGALKSHFSAVH 109
+P +G + C C KTF + AL+SH A H
Sbjct: 162 SPKSGGGSISCKSCSKTFNSEMALQSHSKAKH 193
>05_05_0315 -
24030695-24030787,24030896-24030995,24031120-24031247,
24031350-24031517,24031626-24031741,24031773-24031896,
24032085-24032254,24032255-24032999
Length = 547
Score = 30.7 bits (66), Expect = 4.1
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 634 SAGAQSARESMSPLSASSPPVISPGRLDAANARPREDAKLLF---RETSESFKKMTSLC 689
SAGA ++ ++SP SA+ P P + RP ED K ++ +E +TSLC
Sbjct: 28 SAGAAASPATISP-SAAPAPAKPPAPIGPVLGRPMEDVKSIYTVGKELGRGQFGVTSLC 85
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 30.7 bits (66), Expect = 4.1
Identities = 42/203 (20%), Positives = 74/203 (36%), Gaps = 11/203 (5%)
Query: 280 DDEPEDLSVNKKRDSGDNKTALVKSETSSNRSEPPTALDDKASVPNKRKRKSGNPTRCSQ 339
DD D KK + NK AL + +SS+ S + DD+ K P +
Sbjct: 114 DDSSSDDEPAKKPVARPNKAALSTNSSSSDDSSDESLSDDEP--VKKPAAPLKKPVALAT 171
Query: 340 NNEYSVSDEEYQGDLFRNLSTPGSSRADDEPLSLKKQKPE-DLLTFRNGEEIAVDTESLT 398
N V + D S+ S DD+ + +KP + + E + D++S
Sbjct: 172 NGSKKVETDSSSSD----SSSDEESDEDDKKTAAPVKKPSVAAIQKKTQESDSSDSDS-- 225
Query: 399 RVKAXXXXXXXXXAPSVVREGLRLRSDLYTPSDSGSDLHAMEERLTRARSPSASSDRTDE 458
+ AP+V ++ + SDS SD A + + + + + +
Sbjct: 226 --DSESDEDVPTKAPAVAKKKEESSESSDSESDSDSDDEAAKTIIPAKAAAVKKEEESSD 283
Query: 459 RDVNELEIPIDDENPDRCTACGK 481
++ E D + P + T K
Sbjct: 284 SSDSDSESESDSDEPAKPTIPAK 306
>11_03_0183 - 11310671-11313625,11314243-11314287,11314550-11314717
Length = 1055
Score = 30.3 bits (65), Expect = 5.5
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 284 EDLSVNKKRDSGDNKTALVKSETSSNRSEPPTALDDKASVPNK--------RKRKSGNPT 335
+D S K+ N +A K ++++ +DDK SVP K + +KS N
Sbjct: 453 DDASSKTKKSKNQNNSA--KKNKNTSKDADGLDMDDKGSVPRKGATDDTSIKTKKSKNKN 510
Query: 336 RCSQNNEYSVSDEEYQGDLFRNLSTPGSSRADDEPLSLKK 375
R ++ N+ + D + G S S +A DE LS K
Sbjct: 511 RSAKKNKNTSKDAD--GLETVGASKKLSKKAVDETLSDSK 548
>09_06_0147 + 21195222-21195377,21195471-21195522,21196842-21204362,
21204453-21205031,21205176-21205484,21205638-21205718,
21205971-21206279,21207430-21207816,21207964-21208767,
21208856-21209218,21209437-21209667,21209934-21210278,
21210494-21210712,21210759-21210815,21210978-21211322,
21211538-21211756,21211803-21211859,21212022-21212366,
21212584-21212814,21213100-21213458
Length = 4322
Score = 30.3 bits (65), Expect = 5.5
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 503 PCDVNGCDAAFPSRRSRDRHSSNVDLHRR 531
P DV +A+FP + D HS+ V RR
Sbjct: 1103 PSDVQRAEASFPKQEEADSHSTTVPFQRR 1131
>09_01_0084 + 1202545-1202755,1202797-1203488
Length = 300
Score = 30.3 bits (65), Expect = 5.5
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 503 PCDVNGCDAAFP--SRRSRDRHSSNVD--LHRRLLSTNSPDGREQRPAFEVNADLLNKLY 558
PC + C+ +FP R D +V+ +HRRLLS++S D A ++ ADL +L
Sbjct: 50 PCFLPCCNRSFPILDLRILDSAPGSVEPTVHRRLLSSDSSDSDNIATA-DITADLA-RLR 107
Query: 559 ADIKGLAT 566
A LAT
Sbjct: 108 ARYSRLAT 115
>08_02_0705 - 20204351-20204833
Length = 160
Score = 30.3 bits (65), Expect = 5.5
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 9/117 (7%)
Query: 271 SLNIERHNYDDEPE--DLSVNKKRDSGDNKTALVKSETSSNRSEPPTALDDKASVPNKRK 328
S ++ N DEPE D+ + RD N S + +K +V +
Sbjct: 41 SFKVKPKNGHDEPEPMDMKNDGDRDEEKNDEGSKMHGLSKESDFINSDKGNKVNVAGQCS 100
Query: 329 RKSGN--PTRCS----QNNEYSVSDEEYQGDLFRNLSTPGSSRADDEPLSLKKQKPE 379
+KS PT + ++N +VSDEEY G L ++ S ++ D P+ PE
Sbjct: 101 QKSATSLPTTQTLLLPESNGLNVSDEEYDG-LVKDTSMVEPVQSQDTPMEKLSVVPE 156
>08_01_0998 - 10136050-10138356
Length = 768
Score = 30.3 bits (65), Expect = 5.5
Identities = 28/115 (24%), Positives = 44/115 (38%), Gaps = 4/115 (3%)
Query: 524 SNVDLHRRLLSTNSPD---GREQRPAFEVNADLLNKLYADIKGLATTLESLRYNGNEEAT 580
+ +DL LS P E ++ + L+ + G LESL ++ NE +
Sbjct: 576 AGIDLSSNYLSNEIPSELCNLESMRFLNLSRNHLSGIIPKEIGNLKILESLDFSWNELSG 635
Query: 581 QFPSYVTETMKFYSRNLTALQ-AGMFPRFGDRSFFPAPFLMGNGFPQAGGPYGVS 634
PS ++ M S NL+ +G P P + N F G P +S
Sbjct: 636 SIPSSISNLMSLSSLNLSNNHLSGEIPSGYQLRTLADPSIYSNNFGLCGFPLNIS 690
>06_03_1246 +
28667511-28667750,28667846-28668037,28669145-28669310,
28669785-28670200
Length = 337
Score = 30.3 bits (65), Expect = 5.5
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 11/69 (15%)
Query: 502 HPCDVNGCDAAFPSRRSRDRHSSNVDLHRRLLSTNSPDGRE----QRPAFEVNADLLNKL 557
H C V GCDA+ D HS+ D +T SPD + + A + +A NK+
Sbjct: 75 HDCFVRGCDASVLIAGPDDEHSAGAD------TTLSPDALDLITRAKAAVDADAQCANKV 128
Query: 558 -YADIKGLA 565
ADI LA
Sbjct: 129 SCADILALA 137
>11_04_0118 + 13624086-13625120
Length = 344
Score = 29.9 bits (64), Expect = 7.2
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Query: 609 GDRSFFPAPFLMGNGFPQAGGPYGV 633
GDR+FF APF G AGG YG+
Sbjct: 267 GDRAFFVAPFYFGASC-VAGGKYGI 290
>06_01_1048 + 8252404-8252517,8255799-8256266
Length = 193
Score = 29.9 bits (64), Expect = 7.2
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 611 RSFFPAPFLMGNGFPQA-GGPYGVSAGAQSARESMSP 646
RS+FP P+ G P A GG GVS G A + +P
Sbjct: 63 RSYFPFPYAAGPFRPSAGGGGGGVSLGTHQADQPPAP 99
>04_04_0198 +
23502657-23502900,23505228-23505298,23505690-23505727,
23505905-23507693
Length = 713
Score = 29.9 bits (64), Expect = 7.2
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 78 NPATGKKRVQCNVCLKTFCDKGALKSHFSAVHLREMHKC 116
+PA+ K++ +C+ C KTF AL H +A H R+ C
Sbjct: 456 SPAS-KRKYECSECHKTFSTHQALGGHVAA-HKRQKKSC 492
>04_01_0154 - 1775693-1775942,1776834-1777588
Length = 334
Score = 29.9 bits (64), Expect = 7.2
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Query: 621 GNGFPQAGGPYGVSAGAQSARESMSPLSASSPPVISPGRLDAANARPRED 670
G P A P GV GA AR ++ +A ++P DA A P ED
Sbjct: 25 GENVPAAEHPLGVGGGATHARRKVAAGAAGGADAVAP---DADPASPVED 71
>02_04_0242 + 21210062-21210541
Length = 159
Score = 29.9 bits (64), Expect = 7.2
Identities = 17/51 (33%), Positives = 20/51 (39%)
Query: 617 PFLMGNGFPQAGGPYGVSAGAQSARESMSPLSASSPPVISPGRLDAANARP 667
P L G G +AGG G AG + R + SPP P RP
Sbjct: 15 PDLAGGGRGEAGGGGGDGAGPRRRRRARRGRGGGSPPSSLPDLAGGGKGRP 65
>11_06_0710 - 26492093-26493460
Length = 455
Score = 29.5 bits (63), Expect = 9.6
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Query: 278 NYDDEPEDLSVNKKRDSGDNKTALVKSETSSNRSEPPTALDDKASVPNKRKRKSGNPTRC 337
N DD+ +D +KK+ S ++ K + ++ + DD+ K K+KS + ++
Sbjct: 183 NPDDDEDDKKKSKKKSSDEDNDGAKKKKKKKSKGKSSDEEDDE-----KPKKKSKSKSKS 237
Query: 338 SQNNEYSVSDEEYQG 352
S ++E + +G
Sbjct: 238 SSSDEEDEKKSKSEG 252
>10_08_0583 -
18952168-18952263,18953663-18953740,18954006-18954081,
18954687-18954735,18955271-18955469,18955761-18955799,
18955800-18956123
Length = 286
Score = 29.5 bits (63), Expect = 9.6
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 632 GVSAGAQSARESMSPLSASSPPV-ISPGRLDAANARPREDAKLLFR 676
G+ A A S R + SP +A++PP S G+ A PR + ++ R
Sbjct: 142 GLMASAASCRNNNSPAAAAAPPPPTSQGKAAAKEPSPRTNTAVINR 187
>10_01_0129 + 1535823-1537196
Length = 457
Score = 29.5 bits (63), Expect = 9.6
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 621 GNGFPQAGGPYGVSAGAQSARESMSPLSASSPPVISPGRL 660
G G P+ P G S S R S P + S P SPG++
Sbjct: 17 GGGAPRGSPPGGGSPLNSSRRSSRRPRPSGSSPTSSPGQI 56
>08_02_1264 +
25706009-25706148,25706613-25706716,25707108-25707284,
25707775-25709708,25709781-25709867,25710058-25710091,
25710293-25710381,25710522-25710674
Length = 905
Score = 29.5 bits (63), Expect = 9.6
Identities = 24/107 (22%), Positives = 39/107 (36%), Gaps = 1/107 (0%)
Query: 223 PPSEDASRNVLDLAKLPSMPEEESINYXXXXXXXXXXXXXXXCDNNIRSLNIERHNYD-D 281
P +E+A++ + + S E + Y D+ S+ D D
Sbjct: 601 PANENATQGTKCVPEACSSGENSPVFYAARASAGNEPLNGQDTDSESSSVTSNSFAGDHD 660
Query: 282 EPEDLSVNKKRDSGDNKTALVKSETSSNRSEPPTALDDKASVPNKRK 328
E L + DNKT SS++S ++A V N+RK
Sbjct: 661 RDEILKDEPSSSNDDNKTIQDSEAASSDKSPDRNGTSERAVVSNERK 707
>07_01_0608 + 4515709-4515951,4516085-4516678
Length = 278
Score = 29.5 bits (63), Expect = 9.6
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 302 VKSETSSNRSEPPTALDDKASVPNKRKRKSGNPTR 336
V++ + E TA ++KA+ P K K+K+G P +
Sbjct: 15 VEAAAAEEAVEETTAAEEKAAKPAKEKKKAGRPPK 49
>06_03_0813 -
24853119-24854480,24854711-24855442,24855556-24855962,
24856091-24856359,24856681-24856733,24857019-24857078,
24857309-24857363,24858080-24858155,24858225-24858801
Length = 1196
Score = 29.5 bits (63), Expect = 9.6
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Query: 627 AGGPYGVSAGAQSARESMSPLSASSPPVISPG---RLDAANARPREDA 671
+G G S G ARE MSP + P V++P R A PR DA
Sbjct: 629 SGSGRGSSRGGGGAREIMSPSPSPPPVVVAPRKRVRFVLPAASPRPDA 676
>04_03_0662 +
18479279-18479406,18480445-18480509,18480603-18480874,
18483512-18483586,18483668-18483730,18484081-18484103,
18484170-18484260
Length = 238
Score = 29.5 bits (63), Expect = 9.6
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 332 GNPTRCSQNNEYSVSDEEYQGDLFRNLSTPGSSRADDEPLSLKKQKPEDLLTF 384
G R + +DE+++ DL+R P S D L LK QK +F
Sbjct: 33 GRGARNPPSKRQRQTDEKWKHDLYREDDEPASKSIDPRDLRLKLQKKSSQQSF 85
>03_06_0568 -
34778408-34778710,34779340-34779411,34779549-34779635,
34779722-34779880,34780641-34780739,34780823-34780903,
34781007-34781461,34781550-34781679,34781952-34782743
Length = 725
Score = 29.5 bits (63), Expect = 9.6
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 544 RPAFEVNADLLNKLYADIKGLATTLESLRYNGNEEATQFPSYVTETMKFYSRNLTALQAG 603
+P+F VNA LL + G +T + R G + E +F+ ALQ+G
Sbjct: 635 KPSFHVNASLLKQN----SGKGST-SAQRGGGIPNGVNMDGGIDEE-EFFEWLQNALQSG 688
Query: 604 MFPRFGDRSFFPAP 617
MF FG ++ P+P
Sbjct: 689 MFESFGAQNEPPSP 702
>03_04_0188 - 18241815-18242477
Length = 220
Score = 29.5 bits (63), Expect = 9.6
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 475 RCTACGKIFQNHFTLRMHYRNDHLKLLHPCDVNGCDAA 512
RCT CGK F ++ L H ++ H K P D G AA
Sbjct: 74 RCTVCGKAFASYQALGGH-KSSHRKPPSPGDHYGAAAA 110
>03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776
Length = 429
Score = 29.5 bits (63), Expect = 9.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 7 GAVPGLPAGLDYFMMPRISQPAP 29
GA+PGLPAG + + P P P
Sbjct: 251 GAIPGLPAGFPFLLRPPPPLPVP 273
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.131 0.383
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,297,793
Number of Sequences: 37544
Number of extensions: 803605
Number of successful extensions: 2133
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 2095
Number of HSP's gapped (non-prelim): 67
length of query: 703
length of database: 14,793,348
effective HSP length: 87
effective length of query: 616
effective length of database: 11,527,020
effective search space: 7100644320
effective search space used: 7100644320
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 63 (29.5 bits)
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