Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001407-TA|BGIBMGA001407-PA|undefined
(422 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 33 0.50
U41271-1|AAA82443.1| 215|Caenorhabditis elegans Hypothetical pr... 32 0.67
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami... 32 0.88
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 31 1.2
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 31 1.2
Z72517-2|CAA96694.1| 490|Caenorhabditis elegans Hypothetical pr... 31 2.0
Z71262-4|CAA95814.1| 775|Caenorhabditis elegans Hypothetical pr... 30 2.7
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 30 2.7
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 30 2.7
Z68298-5|CAA92602.1| 290|Caenorhabditis elegans Hypothetical pr... 30 3.6
Z69661-3|CAA93490.1| 293|Caenorhabditis elegans Hypothetical pr... 29 4.7
AF025461-3|AAB70998.3| 632|Caenorhabditis elegans Hypothetical ... 29 6.2
Z81514-8|CAB82214.1| 319|Caenorhabditis elegans Hypothetical pr... 29 8.2
Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical pr... 29 8.2
AL031630-24|CAB82205.1| 319|Caenorhabditis elegans Hypothetical... 29 8.2
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 29 8.2
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 29 8.2
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 32.7 bits (71), Expect = 0.50
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 316 YAPLRKDERNFRDLAPAGTDHREKKVDEKVTPAAVLPQKEDKPKSNQDNRNVNRNVINSH 375
+A L+KDE ++ A + +EKK +EK +KEDK + ++N N + +
Sbjct: 57 FAELKKDEEKDKEEAEKEKNEKEKKEEEKKEDGH--EKKEDKKEDKKENENDEKKEKSKD 114
Query: 376 QYHDSADSYSKPTHKT 391
+ + K KT
Sbjct: 115 DKKEESKEDKKEKTKT 130
>U41271-1|AAA82443.1| 215|Caenorhabditis elegans Hypothetical
protein C46H3.1 protein.
Length = 215
Score = 32.3 bits (70), Expect = 0.67
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 8/56 (14%)
Query: 98 QTTEKATDRPTGRGARASNENWVK--------LPYPNREDSHRDDILTPPQPSGEL 145
Q ++K + P G G+R S + V PYPN S R D++ PQP G +
Sbjct: 21 QISQKLSSIPLGGGSRLSTNSVVNPYSRLMGGQPYPNLHSSLRPDLMRNPQPYGTM 76
>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
protein 10 protein.
Length = 2302
Score = 31.9 bits (69), Expect = 0.88
Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 12/114 (10%)
Query: 64 NQPTPWLPGPLLPEEDPTTKISLTNEVKDVFPSYQTTEKATDRPTGRGARASNENWVKLP 123
N P P +PG + EDP + T +++ P Q + + + P AR + + V P
Sbjct: 1465 NTPVPRIPGVTV--EDPAHQ---TTSLRNTVPLRQFSNQRSTVPLKEPARQTTRSAVPSP 1519
Query: 124 YPNREDSHRDDILTPPQPSGELINSRMPRVNFVTQNRGIEASESRHDKEIIQRA 177
+ I+T P+P+ + + R+ + V + G+ ES H + ++ A
Sbjct: 1520 TVPK-------IITVPEPAHQTDSQRVTAPSPVPRILGVTIPESAHQTQTLRSA 1566
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 31.5 bits (68), Expect = 1.2
Identities = 17/69 (24%), Positives = 32/69 (46%)
Query: 353 QKEDKPKSNQDNRNVNRNVINSHQYHDSADSYSKPTHKTFQDVVRPAEGYFRFEEPLFQS 412
+KED + ++ ++ R + H S S + HK F++ P+E + L Q
Sbjct: 3855 KKEDDEEDQEERESLIREERSFDSPHASEQSQIEKEHKRFEESPVPSEKHHDQSSALPQE 3914
Query: 413 SVDDPYQRK 421
SV P +++
Sbjct: 3915 SVSQPIEKE 3923
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 31.5 bits (68), Expect = 1.2
Identities = 17/69 (24%), Positives = 32/69 (46%)
Query: 353 QKEDKPKSNQDNRNVNRNVINSHQYHDSADSYSKPTHKTFQDVVRPAEGYFRFEEPLFQS 412
+KED + ++ ++ R + H S S + HK F++ P+E + L Q
Sbjct: 3855 KKEDDEEDQEERESLIREERSFDSPHASEQSQIEKEHKRFEESPVPSEKHHDQSSALPQE 3914
Query: 413 SVDDPYQRK 421
SV P +++
Sbjct: 3915 SVSQPIEKE 3923
>Z72517-2|CAA96694.1| 490|Caenorhabditis elegans Hypothetical
protein T28F4.3 protein.
Length = 490
Score = 30.7 bits (66), Expect = 2.0
Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 6/112 (5%)
Query: 29 KKTEDNADSETARDRRGVIEEEKFYNIQADRQQNVNQPTPWLPGPLLPEEDPTTKI---- 84
KK E+ + E ++ EE+K N +Q N+ P P PEE +K+
Sbjct: 355 KKREEEKEKEQEKESPATKEEKKKENGLKTNRQRDNREAPSKPPRKNPEELARSKLQGPR 414
Query: 85 SLTNEVKDVFPSYQTTEKATDRPTGRGARASNEN--WVKLPYPNREDSHRDD 134
LT + +D T + +R T + + +VK+P ++E + +
Sbjct: 415 KLTLKNRDGNAEEPTAKDNEERSTAEDKSKNRQKSVYVKMPLSSKEKGSKHE 466
>Z71262-4|CAA95814.1| 775|Caenorhabditis elegans Hypothetical
protein F22D6.5 protein.
Length = 775
Score = 30.3 bits (65), Expect = 2.7
Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Query: 335 DHREKKVDEKVTPAAVLPQKEDKPKSNQDNRNVNRNVINSHQYHDSA--DSYSKPTHKTF 392
+ RE++ +K A + K K +D+ + N DS D +S H T
Sbjct: 373 EKREEEEKKKKLEAEAAAEAAKKKKQEEDDTGFDMFADNEELPQDSTTIDGHSGAVHDTL 432
Query: 393 QDVVRPAEGYFR 404
+D EGY+R
Sbjct: 433 KDNWDDVEGYYR 444
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 30.3 bits (65), Expect = 2.7
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 339 KKVDEKVTPAAVLPQKEDKPKSNQDNRNVNRNVINSHQYHDSADSYS 385
KK+ + V P V ++ED S+Q + N +R V +H++H S+ S S
Sbjct: 1034 KKIRDPV-PKDVPVRQEDATTSSQSHDNSSRTVSPNHRHHSSSYSNS 1079
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 30.3 bits (65), Expect = 2.7
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 339 KKVDEKVTPAAVLPQKEDKPKSNQDNRNVNRNVINSHQYHDSADSYS 385
KK+ + V P V ++ED S+Q + N +R V +H++H S+ S S
Sbjct: 1048 KKIRDPV-PKDVPVRQEDATTSSQSHDNSSRTVSPNHRHHSSSYSNS 1093
>Z68298-5|CAA92602.1| 290|Caenorhabditis elegans Hypothetical
protein F44D12.6 protein.
Length = 290
Score = 29.9 bits (64), Expect = 3.6
Identities = 22/102 (21%), Positives = 41/102 (40%), Gaps = 2/102 (1%)
Query: 8 IFWCAVLMTGVSSLELPHDFNKKTEDNADSETARDRRGVIEEEKFYNIQADRQQNVNQPT 67
+F ++LMT + ED + ++ + +Q D NV T
Sbjct: 17 VFLISILMTICGGKVRRQNSKPSNEDQQQQPVSEPNYDKTQDIQTVELQEDPLANVRLLT 76
Query: 68 PWLPGPLLPEEDPTTKISLTNEVKDVFPSYQ-TTEKATDRPT 108
P LPG +E+ + +L ++ FP ++ T + T+ T
Sbjct: 77 PTLPGG-CNDENAAKEAALRHKTNQYFPKWEIQTRRITNGTT 117
>Z69661-3|CAA93490.1| 293|Caenorhabditis elegans Hypothetical
protein F48F7.5 protein.
Length = 293
Score = 29.5 bits (63), Expect = 4.7
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 157 TQNRGIEASESRHDKEIIQRATRKDDLRTEFVRPDEQDRNF 197
T G + E+R +KE+I + DD TEF DE + ++
Sbjct: 231 TDLEGSDVDENREEKELIDESNDSDD--TEFEEEDEYETDY 269
>AF025461-3|AAB70998.3| 632|Caenorhabditis elegans Hypothetical
protein M01D1.2a protein.
Length = 632
Score = 29.1 bits (62), Expect = 6.2
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 34 NADSETARDRRGVIEEEKFYNIQADRQQNVNQPTPWLPGPLLPEEDPTTKISLTNEVKDV 93
N E D+R + E+ +Q + T L P + +E+ TK+ E +D+
Sbjct: 499 NEKMEKEADQRAEVNMERELKSALKSKQQLKNDT--LKSPAITDENVNTKLRSATEQEDL 556
Query: 94 FPSYQTTEKATDR 106
YQ E T +
Sbjct: 557 ITIYQCEEFLTSK 569
>Z81514-8|CAB82214.1| 319|Caenorhabditis elegans Hypothetical
protein F26F2.1 protein.
Length = 319
Score = 28.7 bits (61), Expect = 8.2
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 346 TPAAVLPQKEDKPKSNQDNRNVNRNVINS--HQYHDSADS 383
TP A +K DK NQ+N N R +N HQ +S DS
Sbjct: 7 TPNADQRRKNDKACQNQENYNDPRMTVNGDFHQRRNSFDS 46
>Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical
protein T09A5.8 protein.
Length = 339
Score = 28.7 bits (61), Expect = 8.2
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 336 HREKKVDEKVTPAAVLPQKEDKPKSNQDNRNVNRNVINSHQYHDSADSYSKP 387
+++ KV +K T L QK+ K +Q ++ ++ V + HDS SY P
Sbjct: 73 YKKLKVTDK-TELIELLQKQIKKNKSQKSKKRSKTVSDHESNHDSDGSYGTP 123
>AL031630-24|CAB82205.1| 319|Caenorhabditis elegans Hypothetical
protein F26F2.1 protein.
Length = 319
Score = 28.7 bits (61), Expect = 8.2
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 346 TPAAVLPQKEDKPKSNQDNRNVNRNVINS--HQYHDSADS 383
TP A +K DK NQ+N N R +N HQ +S DS
Sbjct: 7 TPNADQRRKNDKACQNQENYNDPRMTVNGDFHQRRNSFDS 46
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 28.7 bits (61), Expect = 8.2
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 56 QADRQQNVNQPT--PWLPGPLLPEEDPTTK 83
Q+ RQQ V +PT P LP P LP +P K
Sbjct: 59 QSSRQQQVGRPTESPPLPPPPLPLSNPPAK 88
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 28.7 bits (61), Expect = 8.2
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 56 QADRQQNVNQPT--PWLPGPLLPEEDPTTK 83
Q+ RQQ V +PT P LP P LP +P K
Sbjct: 281 QSSRQQQVGRPTESPPLPPPPLPLSNPPAK 310
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.314 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,210,312
Number of Sequences: 27539
Number of extensions: 514267
Number of successful extensions: 1131
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1121
Number of HSP's gapped (non-prelim): 25
length of query: 422
length of database: 12,573,161
effective HSP length: 83
effective length of query: 339
effective length of database: 10,287,424
effective search space: 3487436736
effective search space used: 3487436736
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 61 (28.7 bits)
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