Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001406-TA|BGIBMGA001406-PA|IPR012719|T-complex protein
1, gamma subunit, IPR002423|Chaperonin Cpn60/TCP-1,
IPR002194|Chaperonin TCP-1, IPR008950|GroEL-like chaperone, ATPase
(540 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 686 0.0
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 287 4e-78
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 253 4e-68
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 248 1e-66
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 246 6e-66
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 228 2e-60
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 203 4e-53
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 199 9e-52
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 97 4e-21
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 44 5e-05
SPAC1952.15c |rec24|mug6|meiotic recombination protein Rec24|Sch... 29 1.6
SPCC736.12c |||conserved protein|Schizosaccharomyces pombe|chr 3... 28 3.8
SPCC550.03c |||RNA helicase involved in mRNA catabolism|Schizosa... 27 5.0
SPBC365.07c |||TATA element modulatory factor homolog |Schizosac... 27 6.6
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 27 6.6
SPCC1620.03 |mug163||sequence orphan|Schizosaccharomyces pombe|c... 27 8.7
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 686 bits (1696), Expect = 0.0
Identities = 325/522 (62%), Positives = 400/522 (76%), Gaps = 6/522 (1%)
Query: 4 QQPILVLSQNTKRESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDG 63
Q P+ V++ N R+ G K Q+ NI A K +ADVIRTCLGP+AMLKML+DP+G +++TNDG
Sbjct: 2 QSPVFVMNTNGNRQVGHKAQMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDG 61
Query: 64 NAILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVII 123
+AILREI V HPAAKSMIE+ARTQDEEVGDGTTSVI+LAGE+LA A P L + IHP V+I
Sbjct: 62 HAILREIEVAHPAAKSMIELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMI 121
Query: 124 REYRQALEDAIVLLQDKISVPVDLNDRDKMKEVIRSCVGTKYIGRWXXXXXXXXXXXXNT 183
R ++QALEDA+ ++ D+I++PV+++D +M +IR+C+GTK + RW T
Sbjct: 122 RSFKQALEDALSII-DEITLPVNVDDNAEMFRLIRTCIGTKLVARWSDLMCHLALRAVRT 180
Query: 184 VTVNDNGRIEVDIKNYAKVEKIPGGTVEESRVLSGVMFNKDVTHPKMRRYIENPRIILLD 243
V NGR+E+DIK YA+VEK+PGG +E S VL GVM NKDVTHPKMRR IENPRI+LLD
Sbjct: 181 VASTSNGRMEIDIKRYARVEKVPGGEIESSCVLDGVMLNKDVTHPKMRRRIENPRIVLLD 240
Query: 244 CPLEYKKGESQTNIEIMGEQDFTKLLQLEEEHVQRQCEEIIALKPDIVFTEKGVSDLAQH 303
CPLEY+KGESQTNIEI + D+ ++L++EEE V+R C+ IIA+KPD+V TEKGVSDLAQH
Sbjct: 241 CPLEYRKGESQTNIEISKDTDWNRILEIEEEQVKRMCDYIIAVKPDLVITEKGVSDLAQH 300
Query: 304 YLVKAGITAIRRLRKTDNNRLARACGATIVNRTEELKESDVGTGAGLFEIKKIGDEYFTF 363
YL+KA ITA+RR RK+DNNR+ARACGA IVNR E+L+E DVGTG GLF I K+GDEY+TF
Sbjct: 301 YLLKANITALRRTRKSDNNRIARACGANIVNRLEDLREKDVGTGCGLFYIDKLGDEYYTF 360
Query: 364 VTECKNPKACTILLRGASKDVLNEIERNLQDALHVAKNLVVSPRLVAGGGAAEMAVSSAL 423
+T CKNPKACTILLRG SKD++NE+ERNLQDA+ VA+N+ P+L GGGA EMAVS L
Sbjct: 361 LTGCKNPKACTILLRGPSKDIINEVERNLQDAMAVARNVFFHPKLSPGGGATEMAVSVRL 420
Query: 424 SHRA-----AHNTPYRAVATALEIIPRTLAQNCGXXXXXXXXXXXXXXXXXXXXXGIDGE 478
+ +A PYRAVA A+EIIPRTL QNCG GIDGE
Sbjct: 421 AEKARSIEGVAQWPYRAVADAIEIIPRTLVQNCGANPIKALTELRAKHAEGQHSFGIDGE 480
Query: 479 TGEIVDMAVKGIWEPLAVKLQVYKTAVETAILLLRIDDIVSG 520
TG +VDM G+WEP AVKLQ KTA+E+A LLLR+DDIVSG
Sbjct: 481 TGRVVDMHEYGVWEPEAVKLQSIKTAIESACLLLRVDDIVSG 522
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 287 bits (703), Expect = 4e-78
Identities = 161/524 (30%), Positives = 272/524 (51%), Gaps = 14/524 (2%)
Query: 4 QQPILVLSQNTKRESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDG 63
Q P++VL + T GR L NI+A + D IRT LGP K+++D G +V++NDG
Sbjct: 7 QIPVIVLKEGTDDSQGRGQLLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDG 66
Query: 64 NAILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVII 123
I++ + + HPAAK++++IAR QD EVGDGTTSV+V AGE+L A F+ + +II
Sbjct: 67 ATIMKLLDIVHPAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLII 126
Query: 124 REYRQALEDAIVLLQDKISVPVDLNDRDKMKEVIRSCVGTKYIGRW-XXXXXXXXXXXXN 182
R YR+A + A+ +++ I++ +DL+D K+++++ C T + +
Sbjct: 127 RGYRKAAQLAVNKIKE-IAIHLDLSDEGKLRDLLTKCASTAMNSKLIRSNSTFFTKMVVD 185
Query: 183 TVTVNDNGRIEVDIKNYAKVEKIPGGTVEESRVLSGVMFNKDVTH---PKMRRYIENPRI 239
V D + +N ++K+PGG +E+S ++ GV F K ++ + ++ +NP+I
Sbjct: 186 AVLTLDQEDLN---ENMIGIKKVPGGAMEDSLLVKGVAFKKTFSYAGFEQQPKFFKNPKI 242
Query: 240 ILLDCPLEYKKGESQTNIEIMGEQDFTKLLQLEEEHVQRQCEEIIALKPDIVFTEKGVSD 299
+ LD LE K + + + Q++ ++ E + + E I+A +V ++ + D
Sbjct: 243 LCLDVELELKAEKDNAEVRVDKVQEYQNIVDAEWRIIFSKLEAIVATGAKVVLSKLPIGD 302
Query: 300 LAQHYLVKAGITAIRRLRKTDNNRLARACGATIVNRTEELKESDVGTGAGLFEIKKIGDE 359
LA Y I R+ D NR+ +A G +I + ++E +GT FE ++IG +
Sbjct: 303 LATQYFADRDIFCAGRVAADDLNRVVQAVGGSIQSTCSNIEEKHLGT-CDTFEERQIGGD 361
Query: 360 YFTFVTECKNPKACTILLRGASKDVLNEIERNLQDALHVAKNLVVSPRLVAGGGAAEMAV 419
F C K CT++LRG + + E+ER+L DA+ + K+ + + +VAGGGA EM +
Sbjct: 362 RFNLFEGCPKAKTCTLILRGGADQFIAEVERSLHDAIMIVKHALKNNLVVAGGGACEMEL 421
Query: 420 SS-----ALSHRAAHNTPYRAVATALEIIPRTLAQNCGXXXXXXXXXXXXXXXXXXXXXG 474
S +L+ A A +LE+IPR L N G G
Sbjct: 422 SKYLRDYSLTISGKQQNFIAAFARSLEVIPRQLCDNAGFDSTNILNKLRMQHAKGEMWAG 481
Query: 475 IDGETGEIVDMAVKGIWEPLAVKLQVYKTAVETAILLLRIDDIV 518
+D ++ + + K +WEP VK +A E A L+L +D+ +
Sbjct: 482 VDMDSEGVANNFEKFVWEPSTVKSNAILSATEAATLILSVDETI 525
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 253 bits (620), Expect = 4e-68
Identities = 170/532 (31%), Positives = 282/532 (53%), Gaps = 19/532 (3%)
Query: 3 GQQPILVLSQNTKRE-SGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTN 61
G ILV Q KR G +I A KT+A+++RT LGP+ + K+L+ P G I +TN
Sbjct: 15 GNPFILVRDQEKKRRLHGIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTN 74
Query: 62 DGNAILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTV 121
DG IL ++ V+H AK +++++++QD+E+GDGTT V+VLAG +L AE + + IHP
Sbjct: 75 DGATILDQMEVEHQIAKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIR 134
Query: 122 IIREYRQALEDAIVLLQDKISVPVDLNDRD--KMKEVIRSCVGTKYIGRWXXXXXXXXXX 179
I Y +A + A+ L D IS VD + + + ++ +G+K + +
Sbjct: 135 IADGYEKACQVAVKHL-DAISDVVDFSPENTTNLFRSAKTSLGSKVVSK--AHDHFANIA 191
Query: 180 XXNTVTVNDNGRIEVDIKNYAKVEKIPGGTVEESRVLSGVMFNKDVTHPKMRRYIENPRI 239
++V D R +VD + KV+ GG+V++++++ GV+ +KD++HP+M IEN +I
Sbjct: 192 VDAVLSVADLQRKDVDFE-LIKVDGKVGGSVDDTKLVKGVVVDKDMSHPQMPHRIENAKI 250
Query: 240 ILLDCPLEYKKGESQTNIEIMGEQDFTKLLQLEEEHVQRQCEEIIALKPDIVFTEKGVSD 299
+L CP E K +++ ++I +F L E+E Q + + ++V + G D
Sbjct: 251 AILTCPFEPPKPKTKHKLDITSVSEFEALQAYEKEKFQEMIKHVKDAGANLVICQWGFDD 310
Query: 300 LAQHYLVKAGITAIRRLRKTDNNRLARACGATIVNRTEELKESDVGTGAGLFEIKKIGD- 358
A H L++ + A+R + + +A A IV R E+L +G+ AG+ G
Sbjct: 311 EANHLLLQNNLPAVRWVGGPEIELIAIATNGRIVPRFEDLSSDKLGS-AGIVREVSFGTT 369
Query: 359 -EYFTFVTECKNPKACTILLRGASKDVLNEIERNLQDALHVAKNLVVSPRLVAGGGAAEM 417
+ + +C N +A T+ +RG++K +++E +R L DAL V +NL+ R+V GGGAAE+
Sbjct: 370 RDKILVIEKCANSRAVTVFVRGSNKMIVDEAKRALHDALCVVRNLIRDNRVVYGGGAAEI 429
Query: 418 AVSSALSHRA-----AHNTPYRAVATALEIIPRTLAQNCG-XXXXXXXXXXXXXXXXXXX 471
+ S A++ A A A AL+ IP LA+N G
Sbjct: 430 SCSLAVTKEAEKIPGIDQYSMGAFADALDTIPLALAENSGLSSIEALTAVKARHVKENKA 489
Query: 472 XXGIDG-ETGEIVDMAVKGIWEPLAVKLQVYKTAVETAILLLRIDD-IVSGS 521
GID +TG DM + + +PL K Q A + ++L+++D IV+GS
Sbjct: 490 YLGIDCLQTGS-NDMRKQFVIDPLIGKKQQLLLATQLCRMVLKVNDIIVAGS 540
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 248 bits (608), Expect = 1e-66
Identities = 161/521 (30%), Positives = 259/521 (49%), Gaps = 24/521 (4%)
Query: 18 SGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITVQHPAA 77
SG V+ +N+ A IA+V+++ LGP + KML+D +G + +TNDG IL + V+HPA
Sbjct: 18 SGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEHPAG 77
Query: 78 KSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLL 137
K ++E+A+ QD+EVGDGTTSV+++A E+L A + IHPT II YR A+ +A+ +
Sbjct: 78 KVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAVKFM 137
Query: 138 QDKISVPVDLNDRDKMKEVIRSCVGTKYIGRWXXXXXXXXXXXXNTV-TVNDNGRIEVDI 196
D +S VD ++ + V ++ + +K IG +V T N G +
Sbjct: 138 TDVLSCSVDSLGKESLINVAKTSMSSKIIGNDSDFFSTMAVDAMLSVKTSNSKGETRYPV 197
Query: 197 KNYAKVEKIPGGTVEESRVLSGVMFNKDVTHPKMRRYIENPRIILLDCPLEYKKGESQTN 256
K + K G + ES ++ G N + M+ ++N +I +LD L+ K +
Sbjct: 198 K-AVNILKAHGKSSRESVLVKGYALNCTIASQAMKTRVQNAKIAVLDMDLQKTKMALGVH 256
Query: 257 IEIMGEQDFTKLLQLEEEHVQRQCEEIIALKPDIVFTEKGVSDLAQHYLVKAGITAIRRL 316
+ I K+ + E + ++I+ +++ T KG+ DL +++AG A+RR
Sbjct: 257 VTIDDPDQLEKIREREVMITLERVKKILNAGANVILTTKGIDDLCLKSIIEAGAMAVRRC 316
Query: 317 RKTDNNRLARACGATIVNRTEELKESDVGTGAGLFEIKKIGDEYFT-----FVTECKNPK 371
+K D R+A+A GAT+++ L+ + + L +++ E F+ V K
Sbjct: 317 KKEDLRRIAKASGATLLSSLSNLEGEETFESSYLGSAEEVVQEKFSDDECILVKGTKAYS 376
Query: 372 ACTILLRGASKDVLNEIERNLQDALHVAKNLVVSPRLVAGGGAAEMAVSSALSHRAA--- 428
+ +I+LRG ++ L+E+ER++ D+L V K + S ++V GGGA E A+S L + A
Sbjct: 377 SASIVLRGPNEYSLDEMERSMHDSLSVVKRTLESGKVVPGGGAVETALSIYLENFATSLG 436
Query: 429 --HNTPYRAVATALEIIPRTLAQNCGXXXXXXXXXXXXXXXXXXXX------------XG 474
A AL IIPRTLA N G
Sbjct: 437 SREQLAIAEFAQALLIIPRTLAVNAAKDSTELTAKLRAYHAASQNAEVTDVKKRGYKNYG 496
Query: 475 IDGETGEIVDMAVKGIWEPLAVKLQVYKTAVETAILLLRID 515
+D G I D G+ EP KL+ K+AVE I +LRID
Sbjct: 497 LDLLNGVIRDNVKAGVLEPSMSKLKSLKSAVEACIAILRID 537
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 246 bits (602), Expect = 6e-66
Identities = 151/513 (29%), Positives = 260/513 (50%), Gaps = 14/513 (2%)
Query: 16 RESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITVQHP 75
RE ++V+L NI A +++AD IRT LGP+ M KM+ G +++TNDG IL+ ++V HP
Sbjct: 14 REKPQEVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVLHP 73
Query: 76 AAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIV 135
AAK +++++ QD E GDGTTSV++LAG MLA AE L + IHPTVI +++A +
Sbjct: 74 AAKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTVD 133
Query: 136 LLQDKISVPVDLNDRDKMKEVIRSCVGTKYIGRWXXXXXXXXXXXXNTVTVNDNGRIEVD 195
+++ ++ ++L+DR+ + + + +K + ++ V ++ VD
Sbjct: 134 CMKEN-ALAIELSDRESLLRAATTSLNSKIVSQYSNLLAPIAVDAVLKV-IDPRVATNVD 191
Query: 196 IKNYAKVEKIPGGTVEESRVLSGVMFNKD-VTHPKMRRYIENPRIILLDCPLEYKKGESQ 254
+K+ V+K+ GG ++++ ++ G+ + V IE I L+ L K + +
Sbjct: 192 LKDIRIVKKL-GGIIDDTELIPGLALTQTAVKSAGGPTRIEKANIALIQFQLSPPKPDME 250
Query: 255 TNIEIMGEQDFTKLLQLEEEHVQRQCEEIIALKPDIVFTEK-----GVSDLAQHYLVKAG 309
+ + + K+L+ E +++ C++I +++ +K V+DLA H+L K
Sbjct: 251 NQVVVNDYRQMDKILKEERQYLLNMCKKIKKAGANVILIQKSILRDAVNDLALHFLAKLK 310
Query: 310 ITAIRRLRKTDNNRLARACGATIVNRTEELKESDVGTGAGLFEIKKIGDEYFTFVTECKN 369
I I+ + + + + ++ G + E E +G + E G++ F
Sbjct: 311 IMVIKDIERDEVEFICKSTGCKPIADIESFAEDKLGHADLVEETSSSGEKIVKFSGVKNA 370
Query: 370 PKACTILLRGASKDVLNEIERNLQDALHVAKNLVVSPRLVAGGGAAEM-AVSSALSH--- 425
K +IL RGA+ L E ER+L DAL V + LV L+AGGG+ E+ A L H
Sbjct: 371 GKTVSILCRGANLLTLEEAERSLHDALCVIRCLVKQRALIAGGGSPEIEAAQRLLEHARQ 430
Query: 426 -RAAHNTPYRAVATALEIIPRTLAQNCGXXXXXXXXXXXXXXXXXXXXXGIDGETGEIVD 484
RA + ALEIIP TLA+N G GI+ G + +
Sbjct: 431 LEGREAICIRAFSEALEIIPVTLAENAGLNAIQVVTELRSRHANGEKTAGINVRKGIVTN 490
Query: 485 MAVKGIWEPLAVKLQVYKTAVETAILLLRIDDI 517
+ + + +PL V + + A ET ++++IDDI
Sbjct: 491 ILEENVLQPLLVNISAIQLAAETTKMIMKIDDI 523
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 228 bits (557), Expect = 2e-60
Identities = 149/525 (28%), Positives = 261/525 (49%), Gaps = 27/525 (5%)
Query: 13 NTKRESGRKVQL--ENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREI 70
N K ES ++ Q NISA + DV+++ LGP KML+D G I +T DG +L E+
Sbjct: 6 NPKAESIQRAQALQVNISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLTEM 65
Query: 71 TVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQAL 130
+Q+P A + + A QD+ GDGTTSV +L GE+L AE ++ + +HP++I + A
Sbjct: 66 QIQNPTASCIAKAATAQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLAK 125
Query: 131 EDAIVLLQDKISVPVDLNDRDKMKEVIRSCVGTKYIGRWXXXXXXXXXXXXNTVTVNDNG 190
+A+ L D ++ DR+ + V ++ + TK + T+ D
Sbjct: 126 NEALTFL-DSFKTDFEV-DREVLLNVAKTSLSTKISSKVVESLAPAVVDAILTIRRPDE- 182
Query: 191 RIEVDIKNYAKVEKIPGGTVEESRVLSGVMFNKDVTHPKMRRYIENPRIILLDCPLEYKK 250
+D+ + ++ K+ + +++++ G++ + HP M + ++N I++L+ LEY+K
Sbjct: 183 --PIDL-HMVEIMKMQNRSASDTQLIRGLLLDHGARHPDMPKQVKNAYILILNVSLEYEK 239
Query: 251 GESQTNIEIMGEQDFTKLLQLEEEHVQRQCEEIIALKPD----------IVFTEKGVSDL 300
E + + +L++ E + V + +I+ LK + ++ +KG+ L
Sbjct: 240 SEINSGFFYSTSEQRERLVESERKFVDNKLRKIVELKKEVCERDPTANFVIINQKGIDPL 299
Query: 301 AQHYLVKAGITAIRRLRKTDNNRLARACGATIVNRTEELKESDVGTGAGLFEIKKIGDEY 360
+ L K GI A+RR ++ + RL ACG N ++L +G ++E + +G+E
Sbjct: 300 SLDVLAKNGIMALRRAKRRNMERLQLACGGVAQNSVDDLNPEVLGWAGSVYE-RTLGEEK 358
Query: 361 FTFVTECKNPKACTILLRGASKDVLNEIERNLQDALHVAKNLVVSPRLVAGGGAAEMAVS 420
+TFV + K+PK+ TIL+ G + + +I+ +D L KN V L+ G GA E+A +
Sbjct: 359 YTFVEDVKDPKSATILIHGPNTYTIQQIQDATRDGLRAVKNAVEDNCLIVGAGAFEVACA 418
Query: 421 SALSHR-AAHNTPYR------AVATALEIIPRTLAQNCGXXXXXXXXXXXXXXXXXXXXX 473
+ L ++ AA + A A AL IIP+TLA N
Sbjct: 419 AHLRNKFAAKEVKGKAKMGVYAYADALLIIPKTLAAN-SSYDTQDAIVALQEEASEGYKV 477
Query: 474 GIDGETGEIVDMAVKGIWEPLAVKLQVYKTAVETAILLLRIDDIV 518
G+D +TG D V+GI++ V + +A A L+ +D I+
Sbjct: 478 GLDLKTGMPFDPEVEGIYDNYRVIRHMLHSATVIASNLISVDQIL 522
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 203 bits (496), Expect = 4e-53
Identities = 150/525 (28%), Positives = 249/525 (47%), Gaps = 18/525 (3%)
Query: 6 PILVLSQNTKRESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLM-DPMGGIVMTNDGN 64
P + +++ +E G +L + + D++++ LGP+ M K+L + G IV+TNDG
Sbjct: 5 PHQIFNESGIQERGENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGA 64
Query: 65 AILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIR 124
IL+ I + + AAK ++ I++ QD+EVGDGTTSV V A E+L AE + IHP VII
Sbjct: 65 TILKSIALDNAAAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIID 124
Query: 125 EYRQALEDAIVLLQDKISVPVDLNDRDKMKEVIRSCVGTKYIGRWXXXXXXXXXXXXNTV 184
YR A + AI L + S + +D K + + + T +
Sbjct: 125 GYRIATKTAIDAL--RASSIDNSSDPAKFRSDLENIARTTLSSKILSQNKNHFAQLAVDA 182
Query: 185 TVNDNGRIEVDIKNYAKVEKIPGGTVEESRVLSGVMFNKDVTHPKMRRYIENPRIILLDC 244
+ G +D ++ KI GG +++S + G + NK + + +EN I++ +
Sbjct: 183 VLRLKGSTNLD---NIQIIKILGGKLDDSFLDEGFILNKTI-GVNCPKVMENANILIANT 238
Query: 245 PLEYKKGE---SQTNIEIMGEQDFTKLLQLEEEHVQRQCEEIIALKPDIVFTEKGVSDLA 301
++ K + ++ ++ G+ +L + E E ++ + E+I + + + + +
Sbjct: 239 AMDTDKVKVFGARVRVDTTGK--LAELERAEREKMKAKVEKIKSHNINCFINRQLIYNWP 296
Query: 302 QHYLVKAGITAIRRLRKTDNNRLARACGATIVNRTEELKESDVGTGAGLFEIKKIGDEYF 361
+ AGI +I RL+ G I + + + +G + EI IG++
Sbjct: 297 EQLFADAGIMSIEHADFDGIERLSLVTGGEIASTFDHPELVKLGHCKKIEEI-IIGEDKM 355
Query: 362 TFVTECKNPKACTILLRGASKDVLNEIERNLQDALHVAKNLVVSPRLVAGGGAAEMAVSS 421
+ + +ACTI+LRGA+ +L+E ER + DAL V V R+ GGG AEM ++
Sbjct: 356 IKFSGVEAGEACTIVLRGATHQLLDESERAIHDALAVLSQTVAESRVTLGGGCAEMLMAK 415
Query: 422 ALSHRAAHNTPYRAVAT-----ALEIIPRTLAQNCGXXXXXXXXXXXXXXXXXXXXXGID 476
A+ A H +AVA AL +P LA N G G+D
Sbjct: 416 AVEEAATHEPGKKAVAVSAFAKALSQLPTILADNAGFDSSELVAQLKAAHYDGNDTMGLD 475
Query: 477 GETGEIVDMAVKGIWEPLAVKLQVYKTAVETAILLLRIDDIVSGS 521
+ GEI DM KGI E L +K V + E A LLLR+D I+ +
Sbjct: 476 MDEGEIADMRAKGILEALKLKQAVVSSGSEGAQLLLRVDTILKAA 520
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 199 bits (485), Expect = 9e-52
Identities = 135/506 (26%), Positives = 243/506 (48%), Gaps = 19/506 (3%)
Query: 24 LENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITVQHPAAKSMIEI 83
+ N +A + ++++ RT LGP K++++ + +TND I+RE+ V HPAAK +++
Sbjct: 29 IRNCNAIRELSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATIIRELEVIHPAAKLVVDA 88
Query: 84 ARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLLQDKISV 143
+ Q+ E+GD V+V GE+LA AE + + P I + Y AL + +L++ +
Sbjct: 89 TQQQENELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTMEVLEEICAD 148
Query: 144 PVDLNDRDK-MKEVIRSCVGTKYIGRWXXXXXXXXXXXXNTVTVNDNGRIEVDIKNYAKV 202
++ + +K + + IR+C+ +K G TV D + VD +V
Sbjct: 149 KIETVESEKELIKAIRTCISSKQYGNEDFLSDLVAKAIL-TVLPKDPSKFNVD---NIRV 204
Query: 203 EKIPGGTVEESRVLSGVMFNKDVTHPKMRRYIENPRIILLDCPLEYKKGESQTNIEIMGE 262
KI G ++ S+V+ G++F ++ R + ++ + CPL+ + E++ + +
Sbjct: 205 VKIMGSSLYNSQVVKGMVFPREPEGTVTRS--KEAKVAVFSCPLDISQTETKGTVLLHNA 262
Query: 263 QDFTKLLQLEEEHVQRQCEEIIALKPDIVFTEKGVSDLAQHYLVKAGITAIRRLRKTDNN 322
Q+ + EE ++ +EI +V T V+DL HYL + I IR K +
Sbjct: 263 QEMLDFSKGEENLIESHIKEIYDAGVRVVVTSGNVNDLVLHYLNRFEILVIRVPSKFELR 322
Query: 323 RLARACGATIVNRTEELKESDVGTGAGLFEIKKIGDEYFTFVTECKN-PKACTILLRGAS 381
RL R GAT + R ++G+ + E +IG + T + ++ + TI+LRGA+
Sbjct: 323 RLCRVVGATPLARMGVPMPEEMGS-VDVVETIEIGGDRVTVFRQVEDITRTATIVLRGAT 381
Query: 382 KDVLNEIERNLQDALHVAKNLVVSPRLVAGGGAAEMAVSSALSHRAAHNTP------YRA 435
K L+++ER + D +++ K LV RL+ G GA++M + L TP +
Sbjct: 382 KTYLDDLERAIDDGVNIVKALVKDNRLIFGAGASDMQLCIRLI-SVGEKTPGIYQHAIKQ 440
Query: 436 VATALEIIPRTLAQNCGXX-XXXXXXXXXXXXXXXXXXXGID--GETGEIVDMAVKGIWE 492
A E++PRT+++N G G+D E +D GI++
Sbjct: 441 YGEAFEVVPRTISENAGLDPTDVISKLYAAHHKENGESIGVDVECENDGTLDAKEAGIFD 500
Query: 493 PLAVKLQVYKTAVETAILLLRIDDIV 518
L K + A ET + +L +D +V
Sbjct: 501 VLLAKKSAIRLATETVLTVLNVDQVV 526
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 97.5 bits (232), Expect = 4e-21
Identities = 58/218 (26%), Positives = 117/218 (53%), Gaps = 16/218 (7%)
Query: 193 EVDIKNYAKVEKIPGGTVEESRVLSGVMFNKDVTHPKMRRYIENPRIILLDCPLEYKKGE 252
++D+++Y K++KIPGG++++ +++GV+F+K + M R + PRI LL L+Y E
Sbjct: 518 DIDVRSYVKIKKIPGGSIQDCFLVNGVLFSKKASSKSMDRSLRRPRIALLTFSLDYACDE 577
Query: 253 SQTNIEIMGEQDFTKLLQLEEEHVQRQCEEIIALKPDIVFTEKGVSDLAQHYLVKAGITA 312
+ ++ +EE++ I LKP++VF + + +A Y + G+ A
Sbjct: 578 QRI-------LSLDLIISQQEEYIINLVNRICMLKPNLVFAQGQIPSIALKYFEEHGVIA 630
Query: 313 IRRLRKTDNNRLARACGATIVNRTEELKESD-VGTGAGLFEIKK-IGDE------YFTFV 364
L+++ +AR C A I++ ++L +GT G F+++ + DE F +
Sbjct: 631 FHGLKESVLYDIARCCRADIISSIDKLSLCPRLGT-CGRFQLRTYVVDENKGLRKTFAIL 689
Query: 365 TECKNPKACTILLRGASKDVLNEIERNLQDALHVAKNL 402
C CTI+LRGA + L+++++ ++ + +A ++
Sbjct: 690 DRCSERLGCTIVLRGADYNQLSKVKKIVELVVLIAYHI 727
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 44.0 bits (99), Expect = 5e-05
Identities = 26/111 (23%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 32 TIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITV----QHPAAKSMIEIARTQ 87
T+A + LGP+ ++ P G +T DG + R +++ ++ A+ + ++A
Sbjct: 53 TLARAVSVTLGPKGRNVLIDQPFGSPKITKDGVTVARSVSLKDKFENLGARLVQDVASKT 112
Query: 88 DEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLLQ 138
+E GDGTT+ VL + + + +P + R + A+++ + LQ
Sbjct: 113 NEVAGDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLAVDNVVEFLQ 163
>SPAC1952.15c |rec24|mug6|meiotic recombination protein
Rec24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 350
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 338 ELKESDVGTGAGLFEIKKIGDEYFTFV-TECKNPKACTILL 377
+LK++ V GA IK + +E F F+ +CK+P T L+
Sbjct: 151 KLKQTKVYEGADFLRIKTLFEEIFMFLKRDCKSPLVLTRLV 191
>SPCC736.12c |||conserved protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 437
Score = 27.9 bits (59), Expect = 3.8
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 274 EHVQRQCEEIIALKPDIVFTEKGVSDLAQHYLVKA-GITAIRRLRKT 319
EH + E I + P +V E G+S ++++++ TAI +KT
Sbjct: 323 EHRNEKGERISMINPRVVLDENGISHRSRYFIMLCDNETAIAHAKKT 369
>SPCC550.03c |||RNA helicase involved in mRNA
catabolism|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1213
Score = 27.5 bits (58), Expect = 5.0
Identities = 23/63 (36%), Positives = 27/63 (42%), Gaps = 8/63 (12%)
Query: 233 YIENPRIILLDCPLEYKKGESQTNIEIMGEQDFTKLLQLEEEHVQRQCEEIIALKPDIVF 292
YI+ R +LL KG I E T+L+ LE CEE IAL VF
Sbjct: 1032 YIDAERTVLL-------KGRVACEINSTSELVLTELI-LENSLADFSCEETIALLSAFVF 1083
Query: 293 TEK 295
EK
Sbjct: 1084 DEK 1086
>SPBC365.07c |||TATA element modulatory factor homolog
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/59 (23%), Positives = 30/59 (50%)
Query: 249 KKGESQTNIEIMGEQDFTKLLQLEEEHVQRQCEEIIALKPDIVFTEKGVSDLAQHYLVK 307
K+ E Q ++ + +L+ E+E +QR+ EE+ ++V + V L+ Y ++
Sbjct: 98 KEMEEQLELQKSQFEKRISILEKEKEDLQRKMEELTVESMEVVRLTRQVETLSTQYSIQ 156
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 27.1 bits (57), Expect = 6.6
Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 242 LDCPLEYKKG-ESQTNIEIMGEQDFTKLLQLEEEHVQRQCEEIIALKPDIVFTEKGVSDL 300
L C ++ K+ E++ + E K L E +E+ KP ++ K VSD+
Sbjct: 3154 LQCIIQTKQAVEAKKVYSLQAEASLQKKSFLLNEKKNSVMKEVSYAKPAVIEARKSVSDI 3213
Query: 301 AQHYLVK 307
+ +L++
Sbjct: 3214 KKAHLIE 3220
>SPCC1620.03 |mug163||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 186
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/17 (64%), Positives = 13/17 (76%)
Query: 273 EEHVQRQCEEIIALKPD 289
E + RQCE+I ALKPD
Sbjct: 167 ERNRSRQCEKISALKPD 183
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.135 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,017,235
Number of Sequences: 5004
Number of extensions: 76373
Number of successful extensions: 226
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 184
Number of HSP's gapped (non-prelim): 17
length of query: 540
length of database: 2,362,478
effective HSP length: 76
effective length of query: 464
effective length of database: 1,982,174
effective search space: 919728736
effective search space used: 919728736
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 56 (26.6 bits)
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