Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001406-TA|BGIBMGA001406-PA|IPR012719|T-complex protein
1, gamma subunit, IPR002423|Chaperonin Cpn60/TCP-1,
IPR002194|Chaperonin TCP-1, IPR008950|GroEL-like chaperone, ATPase
(540 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25100| Best HMM Match : No HMM Matches (HMM E-Value=.) 349 4e-96
SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 238 9e-63
SB_17755| Best HMM Match : No HMM Matches (HMM E-Value=.) 225 9e-59
SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 201 1e-51
SB_25097| Best HMM Match : No HMM Matches (HMM E-Value=.) 128 8e-30
SB_25096| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 6e-24
SB_37504| Best HMM Match : PIP5K (HMM E-Value=0) 109 7e-24
SB_56828| Best HMM Match : No HMM Matches (HMM E-Value=.) 100 3e-21
SB_53295| Best HMM Match : No HMM Matches (HMM E-Value=.) 94 2e-19
SB_49103| Best HMM Match : Cpn60_TCP1 (HMM E-Value=2.5e-05) 89 1e-17
SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086) 76 8e-14
SB_56262| Best HMM Match : Cpn60_TCP1 (HMM E-Value=6.6e-15) 71 2e-12
SB_37965| Best HMM Match : TIR (HMM E-Value=3.3) 71 3e-12
SB_5310| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 5e-11
SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 8e-10
SB_57454| Best HMM Match : DUF924 (HMM E-Value=1) 55 1e-07
SB_4934| Best HMM Match : NAD_binding_2 (HMM E-Value=4.8) 52 2e-06
SB_30391| Best HMM Match : SpoVG (HMM E-Value=6.4) 50 6e-06
SB_49248| Best HMM Match : Cpn60_TCP1 (HMM E-Value=1.6) 48 1e-05
SB_29096| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 3e-05
SB_3351| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 8e-05
SB_26565| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.062
SB_56236| Best HMM Match : VWA (HMM E-Value=0.16) 32 1.0
SB_32940| Best HMM Match : EGF (HMM E-Value=0) 32 1.0
SB_12781| Best HMM Match : Spindle_assoc (HMM E-Value=0.12) 32 1.3
SB_49413| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.4
>SB_25100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 546
Score = 349 bits (857), Expect = 4e-96
Identities = 177/305 (58%), Positives = 218/305 (71%), Gaps = 33/305 (10%)
Query: 240 ILLDCPLEYKKGESQTNIEIMGEQDFTKLLQLEEEHVQRQCEEIIALKPDIVFTEKGVSD 299
+LLDC LEYKKGESQT++E+ + DF+++LQLEEE +++ C+E+IALKPD+V TEKG+SD
Sbjct: 1 MLLDCNLEYKKGESQTSLELSSDTDFSRVLQLEEEFIKKMCDEVIALKPDLVITEKGISD 60
Query: 300 LAQHYLVKAGITAIRRLRKTDNNRLARACGATIVNRTEELKESDVGTGAGLFEIKKIGDE 359
LAQH+L+KA ITAIRR+RKTDNNR+ARACGATIVNRTEELKE D+GTGAGLFE+ K GDE
Sbjct: 61 LAQHFLMKANITAIRRVRKTDNNRIARACGATIVNRTEELKEEDIGTGAGLFEVNKFGDE 120
Query: 360 -----------------------YF----TFVTECKNPKACTILLRGASKDVLNEIERNL 392
Y+ TF+TECKNPKACTILLRGASKDVLNE+ERNL
Sbjct: 121 TIKLDKLNYNLLILIKEAIQRTSYYHRYFTFITECKNPKACTILLRGASKDVLNEVERNL 180
Query: 393 QDALHVAKNLVVSPRLVAGGGAAEMAVSSALSHRA-----AHNTPYRAVATALEIIPRTL 447
QDA++VA+N++V PRLV GGGA EMA++ AL+ +A PY+AVA LE+IPRTL
Sbjct: 181 QDAMNVARNVIVDPRLVPGGGACEMALAHALTEKAKLVAGVQQWPYKAVAKGLEVIPRTL 240
Query: 448 AQNCGXXXXXXXXXXXXXXXXXXXXX-GIDGETGEIVDMAVKGIWEPLAVKLQVYKTAVE 506
QNCG GIDGE+G+IVDM G+W+ AVK Q +KTA+E
Sbjct: 241 IQNCGANTIRTITALRAKHAAEGNTSWGIDGESGQIVDMQELGVWDTYAVKAQTFKTALE 300
Query: 507 TAILL 511
LL
Sbjct: 301 KKSLL 305
>SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 505
Score = 238 bits (582), Expect = 9e-63
Identities = 142/436 (32%), Positives = 239/436 (54%), Gaps = 14/436 (3%)
Query: 26 NISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITVQHPAAKSMIEIAR 85
+I A + +A +++T LGP+ M KM++ P G + +TNDG IL + V H AK M+E+++
Sbjct: 35 HILAARAVASILKTSLGPKGMDKMMVSPDGEVTVTNDGATILGMMEVDHQIAKLMVELSK 94
Query: 86 TQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLLQDKI--SV 143
+QD E+GDGTT V+VLAG +L AE L IHP I Y A + A+ + D I +
Sbjct: 95 SQDNEIGDGTTGVVVLAGALLEHAEQLLDWGIHPIRIADGYELAAKIALEHM-DSIADNF 153
Query: 144 PVDLNDRDKMKEVIRSCVGTKYIGRWXXXXXXXXXXXXNTVTVNDNGRIEVDIKNYAKVE 203
PVD ++++ + + + +G+K + R ++V D R +VD + KVE
Sbjct: 154 PVDKDNKESLIQTAMTTLGSKIVSRCHRPLAEIAVDA--VLSVADLERKDVDFE-LIKVE 210
Query: 204 KIPGGTVEESRVLSGVMFNKDVTHPKMRRYIENPRIILLDCPLEYKKGESQTNIEIMGEQ 263
GG ++++ ++ GV+ +KD++HP+M + +++ +I +L CP E K +++ +++ +
Sbjct: 211 GKEGGKLDDTVLVKGVVVDKDMSHPQMPKVVKDAKIAILTCPFEPPKPKTKHKLDVATVE 270
Query: 264 DFTKLLQLEEEHVQRQCEEIIALKPDIVFTEKGVSDLAQHYLVKAGITAIRRLRKTDNNR 323
D+ KL + E E +++ ++ + G D A H L++ + A+R + +
Sbjct: 271 DYKKLQEYEREKFTEMIKQVKDTGANLAICQWGFDDEANHLLLQNHLPAVRWVGGPEIEL 330
Query: 324 LARACGATIVNRTEELKESDVGTGAGLFEIKKIG--DEYFTFVTECKNPKACTILLRGAS 381
+A A G IV R EL +G AG+ G + + EC N +A TI +RG +
Sbjct: 331 IAIATGGRIVPRFSELTSEKLGK-AGIVRELSFGTTKDKMLVIEECHNSRAVTIFIRGGN 389
Query: 382 KDVLNEIERNLQDALHVAKNLVVSPRLVAGGGAAEMAVSSALSHRA-----AHNTPYRAV 436
K ++ E +R++ DAL V +NLV R+V GGGA E++ S A++ A RA
Sbjct: 390 KMIVGEAKRSIHDALCVVRNLVRDSRVVYGGGATELSCSIAIAKEADKISTIEQYAMRAY 449
Query: 437 ATALEIIPRTLAQNCG 452
A AL+ IP LA+N G
Sbjct: 450 ADALDNIPLALAENSG 465
>SB_17755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 317
Score = 225 bits (549), Expect = 9e-59
Identities = 118/187 (63%), Positives = 138/187 (73%), Gaps = 32/187 (17%)
Query: 298 SDLAQHYLVKAGITAIRRLRKTDNNRLARACGATIVNRTEELKESDVGTGAGLFEIKKIG 357
SDLAQH+L+KA ITAIRR+RKTDNNR+ARACGATIVNRTEELKE D+GTGAGLFE+ K G
Sbjct: 116 SDLAQHFLMKANITAIRRVRKTDNNRIARACGATIVNRTEELKEEDIGTGAGLFEVNKFG 175
Query: 358 DE-----------------------YF----TFVTECKNPKACTILLRGASKDVLNEIER 390
DE Y+ TF+TEC NPKACTILLRGASKDVLNE+ER
Sbjct: 176 DESIKLDKLNYNLLILIKEAIQMTSYYRRYFTFITECNNPKACTILLRGASKDVLNEVER 235
Query: 391 NLQDALHVAKNLVVSPRLVAGGGAAEMAVSSALSHRA-----AHNTPYRAVATALEIIPR 445
NLQDA++VA+N++V PRLV GGGA EMA++ AL+ +A PY+AVA LE+IPR
Sbjct: 236 NLQDAMNVARNVIVDPRLVPGGGACEMALAHALTEKAKLVAGVQQWPYKAVAKGLEVIPR 295
Query: 446 TLAQNCG 452
TL QNCG
Sbjct: 296 TLIQNCG 302
Score = 54.8 bits (126), Expect = 2e-07
Identities = 21/34 (61%), Positives = 31/34 (91%)
Query: 265 FTKLLQLEEEHVQRQCEEIIALKPDIVFTEKGVS 298
F+++LQLEEE +++ C+E+IALKPD+V TEKG+S
Sbjct: 38 FSRVLQLEEEFIKKMCDEVIALKPDLVITEKGIS 71
>SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 531
Score = 201 bits (491), Expect = 1e-51
Identities = 146/526 (27%), Positives = 254/526 (48%), Gaps = 19/526 (3%)
Query: 6 PILVLSQNTKRESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMD--PMGGIVMTNDG 63
P+ +L+Q + E +L + I D++++ LGP+ M K+L G I +TNDG
Sbjct: 5 PVSILNQGAEEERAETARLSSFVGAIAIGDLVKSTLGPKGMDKILQSFGQNGNIQVTNDG 64
Query: 64 NAILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVII 123
IL+ I + +PAAK ++E+++ QD+EVGDGTTSV VL E+L AE ++ IHP I+
Sbjct: 65 ATILKSIGIDNPAAKILVELSKVQDDEVGDGTTSVTVLTSELLKEAEKLVSCKIHPQTIV 124
Query: 124 REYRQALEDAIVLLQDKISVPVD-LNDRDKMKEVIRSCVGTKYIGRWXXXXXXXXXXXXN 182
+R++++ A L+ + VD +D +K +E + + T +
Sbjct: 125 AGWRKSVKAAEKALE---AAAVDHSSDPEKFREDLMNIARTTLSSKILVQHRDHFAKLAV 181
Query: 183 TVTVNDNGRIEVDIKNYAKVEKIPGGTVEESRVLSGVMFNKDVTHPKMRRYIENPRIILL 242
+ G D+ ++K+ GG V +S + G + +K + + ++ IEN +I++
Sbjct: 182 DAVLRLKG--SGDLNAIQIIKKLGGGMV-DSFLDEGFLLDKKIGVNQPKK-IENAKILIA 237
Query: 243 DCPLEYKKGE-SQTNIEIMGEQDFTKLLQLEEEHVQRQCEEIIALKPDIVFTEKGVSDLA 301
+ P++ K + + + + L E++ ++ + E II + + + +
Sbjct: 238 NTPMDADKIKVFGSRVRVDSTAKIADLEMAEKQKMKEKVEMIIKHDINCFINRQLIYNYP 297
Query: 302 QHYLVKAGITAIRRLRKTDNNRLARACGATIVNRTEELKESDVGTGAGLFEIKKIGDEYF 361
+ AG+ AI RLA G IV+ +GT + E+ IG++
Sbjct: 298 EQLFADAGVMAIEHADFEGVERLALVTGGEIVSTFGRPDLVKLGTCKKIEEV-MIGEDKL 356
Query: 362 TFVTECKNPKACTILLRGASKDVLNEIERNLQDALHVAKNLVVSPRLVAGGGAAEMAVSS 421
+ C +ACT+++RGA++ +L+E ER+L DAL V + V GGGA+E+ ++
Sbjct: 357 IHFSGCALNEACTVVIRGATQQILDEAERSLHDALCVLNQTGKENKTVNGGGASEVLMAH 416
Query: 422 ALSHRAAHNTP------YRAVATALEIIPRTLAQNCGXXXXXXXXXXXXXXXXXXXXXGI 475
A+S AA TP + ATAL +P +A N G G+
Sbjct: 417 AVSQLAA-KTPGKEAAAMESFATALRQLPTIIADNAGYDSADLVAKLRAAHTQGKNTYGL 475
Query: 476 DGETGEIVDMAVKGIWEPLAVKLQVYKTAVETAILLLRIDDIVSGS 521
+ G + DM GI E VK QV +A E A +++R+D+IV +
Sbjct: 476 NMVNGTVGDMRDLGITESYQVKRQVLLSAAEAAEMIVRVDNIVKAA 521
>SB_25097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 128 bits (310), Expect = 8e-30
Identities = 61/92 (66%), Positives = 74/92 (80%)
Query: 59 MTNDGNAILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIH 118
MTNDGNAILREI V+HPAAKSMIEI+RTQDEEVGDGTTSVI+LAGE +++AEPFL Q +H
Sbjct: 1 MTNDGNAILREIQVKHPAAKSMIEISRTQDEEVGDGTTSVIILAGEFMSVAEPFLEQQMH 60
Query: 119 PTVIIREYRQALEDAIVLLQDKISVPVDLNDR 150
PT II YR A++D I +L+ +I + R
Sbjct: 61 PTQIIAAYRLAMDDMIDILKQQIREELQYRSR 92
>SB_25096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 109 bits (262), Expect = 6e-24
Identities = 52/88 (59%), Positives = 66/88 (75%)
Query: 63 GNAILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVI 122
GN +I V+HPAAKSMIEI+RTQDEEVGDGTTSVI+LAGE +++AEPFL Q +HPT I
Sbjct: 202 GNVQAAKIQVKHPAAKSMIEISRTQDEEVGDGTTSVIILAGEFMSVAEPFLEQQMHPTQI 261
Query: 123 IREYRQALEDAIVLLQDKISVPVDLNDR 150
I YR A++D I +L+ +I + R
Sbjct: 262 IAAYRLAMDDMIDILKQQIREELQYRSR 289
Score = 36.7 bits (81), Expect = 0.047
Identities = 16/21 (76%), Positives = 18/21 (85%)
Query: 11 SQNTKRESGRKVQLENISAGK 31
+QNTKRESGRKVQL N+ A K
Sbjct: 188 NQNTKRESGRKVQLGNVQAAK 208
>SB_37504| Best HMM Match : PIP5K (HMM E-Value=0)
Length = 2119
Score = 109 bits (261), Expect = 7e-24
Identities = 61/213 (28%), Positives = 115/213 (53%), Gaps = 11/213 (5%)
Query: 193 EVDIKNYAKVEKIPGGTVEESRVLSGVMFNKDVTHPKMRRYIENPRIILLDCPLEYKKGE 252
+++I+ Y K +KIPGG+ +E +++SGV+F K+V+H KM NP+I++L C ++Y++ E
Sbjct: 563 DMNIRQYVKFKKIPGGSRDECKLISGVVFTKNVSHKKMSCVFNNPQILVLCCAIDYQRNE 622
Query: 253 SQTNIEIMGEQDFTKLLQLEEEHVQRQCEEIIALKPDIVFTEKGVSDLAQHYLVKAGITA 312
++ L+ E ++ + AL+P+++ EK VS LAQ L++ GI+
Sbjct: 623 NRL-------ASLDPLVLQERNFLKNFVSRVAALRPNVLLVEKTVSRLAQEMLLQHGISL 675
Query: 313 IRRLRKTDNNRLARACGATIVNRTEELKESDVGT----GAGLFEIKKIGDEYFTFVTECK 368
++ R++R A + E+L +G+ F++K + ++ C
Sbjct: 676 ALNVKPAVIERVSRCTKAETLRSMEQLSRPRLGSCQLFRVQNFKLKNGETKTLMYLEGCP 735
Query: 369 NPKACTILLRGASKDVLNEIERNLQDALHVAKN 401
CT+ LRG + VL +I++ +Q ++VA N
Sbjct: 736 TELGCTVTLRGGNSFVLTKIKKIMQFLIYVAYN 768
>SB_56828| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 525
Score = 100 bits (239), Expect = 3e-21
Identities = 62/228 (27%), Positives = 117/228 (51%), Gaps = 4/228 (1%)
Query: 201 KVEKIPGGTVEESRVLSGVMFNKDVTHPKMRRYIENPRIILLDCPLEYKKGESQTNIEIM 260
+V KI G + S V+ G++F K V + ++ +I + CPL+ + E++ + I
Sbjct: 57 RVAKILGSGIHNSEVVQGMVFKKGVEGDITSK--KDCKIAVFSCPLDLMQTETKGTVLIK 114
Query: 261 GEQDFTKLLQLEEEHVQRQCEEIIALKPDIVFTEKGVSDLAQHYLVKAGITAIRRLRKTD 320
++ + EE+ ++ Q + I D++ + V+D+A H+ K I +R K D
Sbjct: 115 NAEELKSFSKGEEDLLEMQIKSIKEKGADVIVSGGKVADMALHFCNKYQIMVVRLTSKWD 174
Query: 321 NNRLARACGATIVNRTEELKESDVGTGAGLFEIKKIGDEYFT-FVTECKNPKACTILLRG 379
RL RA AT + + D+G L + +IG+ T F E + T+++RG
Sbjct: 175 LRRLCRAISATALPKVTTPTTEDLG-HCDLVYLSEIGETPVTIFKQEREETAVATVVIRG 233
Query: 380 ASKDVLNEIERNLQDALHVAKNLVVSPRLVAGGGAAEMAVSSALSHRA 427
++++++++IER + D ++ K L PR V G GA+E+ ++ L+ A
Sbjct: 234 STENIMDDIERAIDDGVNSFKALTRDPRFVPGAGASEIELARKLTSHA 281
>SB_53295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 272
Score = 94.3 bits (224), Expect = 2e-19
Identities = 66/216 (30%), Positives = 102/216 (47%), Gaps = 7/216 (3%)
Query: 310 ITAIRRLRKTDNNRLARACGATIVNRTEELKESDVGTGAGLFEIKKIGDEYFTFVTECKN 369
I +R + + + + ++ G + + D+ A L E +G +T N
Sbjct: 3 ILVVRDIERDEIEFICKSIGCKPIASLDHFNP-DMLASAELVEEVSVGTSKVVKITGVSN 61
Query: 370 P-KACTILLRGASKDVLNEIERNLQDALHVAKNLVVSPRLVAGGGAAEMAVSSALSHRAA 428
P ++L+RG++K VL E +R+L DAL V + LV L+AGGGA E+ V+ L+ +
Sbjct: 62 PGNTVSVLVRGSNKLVLEEADRSLHDALCVIRCLVKKRALIAGGGAPEIEVALRLAEYSQ 121
Query: 429 HNTP-----YRAVATALEIIPRTLAQNCGXXXXXXXXXXXXXXXXXXXXXGIDGETGEIV 483
T RA A ALEIIP TLA+N G GI+ G +
Sbjct: 122 TLTSMDAYCVRAFAEALEIIPYTLAENAGLNPIATVTELRNRHAQGEVTAGINVRKGTVT 181
Query: 484 DMAVKGIWEPLAVKLQVYKTAVETAILLLRIDDIVS 519
++ + + +PL V + A ET +L+IDDIVS
Sbjct: 182 NILEENVLQPLLVSTSAVQLASETVRSILKIDDIVS 217
>SB_49103| Best HMM Match : Cpn60_TCP1 (HMM E-Value=2.5e-05)
Length = 206
Score = 88.6 bits (210), Expect = 1e-17
Identities = 58/171 (33%), Positives = 88/171 (51%), Gaps = 8/171 (4%)
Query: 289 DIVFTEKGVSDLAQHYLVKAGITAIRRLRKTDNNRLARACGATIVNRTEELKESDVGTGA 348
++ + G D A H L++ + A+R + + +A A G IV R EL +G A
Sbjct: 11 NLAICQWGFDDEANHLLLQNHLPAVRWVGGPEIELIAIATGGRIVPRFSELTSEKLGK-A 69
Query: 349 GLFEIKKIGD--EYFTFVTECKNPKACTILLRGASKDVLNEIERNLQDALHVAKNLVVSP 406
G+ G + + EC N +A TI +RG +K ++ E +R++ DAL V +NLV
Sbjct: 70 GIVRELSFGTTKDKMLVIEECHNSRAVTIFIRGGNKMIVGEAKRSIHDALCVVRNLVRDS 129
Query: 407 RLVAGGGAAEMAVSSALSHRA-----AHNTPYRAVATALEIIPRTLAQNCG 452
R+V GGGA E++ S A++ A RA A AL+ IP LA+N G
Sbjct: 130 RVVYGGGATELSCSIAIAKEADKIATIEQYAMRAYADALDNIPLALAENSG 180
>SB_22388| Best HMM Match : Extensin_2 (HMM E-Value=0.086)
Length = 724
Score = 75.8 bits (178), Expect = 8e-14
Identities = 36/89 (40%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 3 GQQP-ILVLSQNTKRESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTN 61
G QP I++L + T G + NI A + IAD +RT LGP+ M K+++D G ++N
Sbjct: 636 GPQPGIILLKEGTDASQGIPQLISNIDACQFIADAVRTTLGPRGMDKLIVDGRGKATISN 695
Query: 62 DGNAILREITVQHPAAKSMIEIARTQDEE 90
DG I+ + + HPAAK++++IA++QD E
Sbjct: 696 DGATIINLLDIVHPAAKTLVDIAKSQDAE 724
>SB_56262| Best HMM Match : Cpn60_TCP1 (HMM E-Value=6.6e-15)
Length = 563
Score = 71.3 bits (167), Expect = 2e-12
Identities = 121/537 (22%), Positives = 208/537 (38%), Gaps = 57/537 (10%)
Query: 36 VIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITVQHPAAKSMIEIARTQDEEVGDGT 95
+++ GP + ML G I++TN G+ IL +T+ +P + ++E AR+ G G
Sbjct: 15 ILKKSFGPNGLDVMLRSSSGNILITNSGSMILESLTMGNPTERMIVEAARSLSGRTGSGA 74
Query: 96 TSVIVLAGEML-AIA-------EPFLTQNIHPTVI-IREYRQA--------LEDAIVLLQ 138
+ I++ E+ IA E L + T I + + QA +D +
Sbjct: 75 SYFIIILAEIFREIANITGITKEKTLKELSAKTQIELFSFAQAFNKIESERFDDLFLRAF 134
Query: 139 DKISVPVDLND------RDKMKEVIRSCVGTKYIGRWXXXXXXXXXXXXNTVTVNDNGRI 192
D + V VDL++ R K+K VI +C+ K+ + + +
Sbjct: 135 DNLEVRVDLSEDNCELVRKKLKAVINTCLNGKFPKQQRDNLATLLADFLHLSCCAHSQLY 194
Query: 193 EVDIKNYAKVEKI----PGGTVEESRVLSGVMFNKDV-THPK---MRRYIENPRIILLDC 244
+ + + +I G + S V+ GVM + + T K MR + + I L
Sbjct: 195 QFVLDSIDAFSEICLVCIGAPQDFSHVVEGVMIPQQMSTKTKGFGMRNFPNGFKFIALTF 254
Query: 245 PLEYKKGESQTNIEIMGEQDFTKLLQLEEEHVQRQCEEIIALKPDIVFTEKGVSDLAQHY 304
L+ E+ T + I F L + + + + + + ++ T K +SD+ H
Sbjct: 255 ALDECTPETPTTLRITKGNLFDTTLNWKRTNTLKILQYLKMQEIQLIITSKVMSDMVIHL 314
Query: 305 LVKAGITAIRRLRKTDNNRLARACGATIVNRTEELKES-----DVGTG-AGLFEIKKIGD 358
+ I I + ++ C + ++L D+ G A K IG+
Sbjct: 315 CNQLNIAVIHSI---PIETISYICNVLSIQPLQDLNLDKPTLPDIFQGSAKSCSPKIIGN 371
Query: 359 E-YFTFVTECKNPKACTILLRGASKDVLNEIERNLQDALHVAKNLVVSPR----LVAGGG 413
+ Y V A I+L G ++ + + L DAL K + R L+ G G
Sbjct: 372 QKYSHLVLGVSEVSAHQIMLCGPAEGLCRQYYLALLDALKAIKMTFSTDRRALLLLPGCG 431
Query: 414 AAEMAVSSALSH--RAAHNTPY----RAVATALEIIPRTLAQN--CG----XXXXXXXXX 461
E+A++S L H + NT + + +L IPRTL QN G
Sbjct: 432 LVEVALASDLQHLSKMITNTELALACQILGKSLLQIPRTLYQNSFAGKQGLQQFLTQLQI 491
Query: 462 XXXXXXXXXXXXGIDGETGEIVDMAVKGIWEPLAVKLQVYKTAVETAILLLRIDDIV 518
GIDG TG ++ V I EPL K + +LRI+ ++
Sbjct: 492 METSWRNSNLSEGIDGRTGLPINPFVHEILEPLLAKKDTLHCVFQCVTQVLRINQVL 548
>SB_37965| Best HMM Match : TIR (HMM E-Value=3.3)
Length = 189
Score = 70.5 bits (165), Expect = 3e-12
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 13/164 (7%)
Query: 368 KNPKACTILLRGASKDVLNEIERNLQDALHVAKNLVVSPRLVAGGGAAEMAVSSALSHRA 427
K + +I+LRGA+ +L+E+ER++ DA+ V K ++ S LV GGGA E A+S L + A
Sbjct: 3 KARSSSSIILRGANDYMLDEMERSMHDAICVVKRVLESKTLVPGGGAVEAALSIYLENFA 62
Query: 428 A-----HNTPYRAVATALEIIPRTLAQNCGXXXXXXXXXXXXXXXXXXXXX--------G 474
A +L +IP+ L+ N G
Sbjct: 63 TSLGSREQLAIAEFANSLLVIPKILSVNAAKDSADLVAKLRAFHNTSQINAERSHLKWIG 122
Query: 475 IDGETGEIVDMAVKGIWEPLAVKLQVYKTAVETAILLLRIDDIV 518
+D G + D G++EP K++ K A E AI +LRIDD++
Sbjct: 123 LDLVEGTVRDNKKAGVFEPAICKIKSLKFATEAAITILRIDDMI 166
>SB_5310| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 66.5 bits (155), Expect = 5e-11
Identities = 37/97 (38%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 361 FTFVTECKNPKACTILLRGASKDVLNEIERNLQDALHVAKNLVVSPRLVAGGGAAEMAVS 420
+ F + CK CTI++RG ++ + E ER+L DA+ + + + + +VAGGGA EM +S
Sbjct: 2 YNFFSGCKQSTTCTIIMRGGAEQFMEETERSLHDAIMIVRRAMKNDAVVAGGGAIEMELS 61
Query: 421 SAL---SHRAA--HNTPYRAVATALEIIPRTLAQNCG 452
L S A A+A A EIIPR L N G
Sbjct: 62 KYLRDYSRTIAGKEQLLIGAMAKAFEIIPRQLCDNAG 98
>SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 762
Score = 62.5 bits (145), Expect = 8e-10
Identities = 29/93 (31%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Query: 72 VQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQALE 131
+QHP A + +A QD+ GDGTTS +++ GE+L A+ ++++ +HP ++ + A +
Sbjct: 171 IQHPTASLIARVATAQDDITGDGTTSNVMIIGELLKQADLYVSEGLHPRLVTEGFEVAKK 230
Query: 132 DAIVLLQDKISVPVDLNDRDKMKEVIRSCVGTK 164
A+ +L++ + V ++ DRD + V ++ + TK
Sbjct: 231 KALEVLEE-VKVSREM-DRDTLINVAKTSLRTK 261
Score = 39.5 bits (88), Expect = 0.007
Identities = 22/67 (32%), Positives = 31/67 (46%)
Query: 434 RAVATALEIIPRTLAQNCGXXXXXXXXXXXXXXXXXXXXXGIDGETGEIVDMAVKGIWEP 493
+A A AL +IP+TLAQN G G+D +GE + A G+W+
Sbjct: 360 KAFADALLVIPKTLAQNSGFDPQETMVKLLEEYADSNTPVGVDLSSGEAMIPADAGVWDN 419
Query: 494 LAVKLQV 500
VK Q+
Sbjct: 420 YRVKRQL 426
Score = 29.5 bits (63), Expect = 7.1
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 9 VLSQNTKRESGRKVQLE--NISAGKTIADVIRTCLGPQAMLKML 50
+ S N K E R NI+A + + DV++T LGP+ +K+L
Sbjct: 4 IKSLNPKAEVARSAAALSLNITAARGLQDVLKTNLGPKGTMKIL 47
>SB_57454| Best HMM Match : DUF924 (HMM E-Value=1)
Length = 144
Score = 55.2 bits (127), Expect = 1e-07
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 83 IARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLLQ---- 138
+++ QD+EVGDGTTSV VLA E+L AE ++ IHP I+ +R++++ A L+
Sbjct: 2 LSKVQDDEVGDGTTSVTVLASELLKEAEKLVSCKIHPQTIVAGWRKSVKAAEKALEAAAV 61
Query: 139 DKISVPVDLNDRDKMKEVIRSCVGTKYI 166
D S P RD + + R+ + +K +
Sbjct: 62 DHSSDPEKF--RDDLMNIARTTLSSKIL 87
>SB_4934| Best HMM Match : NAD_binding_2 (HMM E-Value=4.8)
Length = 186
Score = 51.6 bits (118), Expect = 2e-06
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 16 RESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAI 66
+E +++++ NI+A K +AD IRT LGP+ M KM+ G + +TNDG I
Sbjct: 19 KEKPQEIRMTNITAAKAVADAIRTSLGPKGMDKMIQGGNGDVTITNDGATI 69
>SB_30391| Best HMM Match : SpoVG (HMM E-Value=6.4)
Length = 101
Score = 49.6 bits (113), Expect = 6e-06
Identities = 22/62 (35%), Positives = 39/62 (62%)
Query: 272 EEEHVQRQCEEIIALKPDIVFTEKGVSDLAQHYLVKAGITAIRRLRKTDNNRLARACGAT 331
E + + + ++I+A ++V + G+ DL Y V+ G A+RR++K D R+AR+ GAT
Sbjct: 2 ESDITKERIQKILASGANVVLSTGGIDDLCLKYFVECGAMAVRRVKKGDLKRIARSTGAT 61
Query: 332 IV 333
+V
Sbjct: 62 MV 63
>SB_49248| Best HMM Match : Cpn60_TCP1 (HMM E-Value=1.6)
Length = 278
Score = 48.4 bits (110), Expect = 1e-05
Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 12 QNTKRES--GRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILRE 69
QN+ +E G + + + T+AD + LGP+ ++ GG +T DG + +
Sbjct: 56 QNSPKELKFGAEARAAMLQGVDTLADAVAVTLGPKGKNVIIEQSFGGPKITKDGVTVAKA 115
Query: 70 ITV----QHPAAKSMIEIARTQDEEVGDGTTSVIVLA 102
I + Q+ A+ + ++A +EE GDGTT+ VLA
Sbjct: 116 IELKDKYQNIGARLVQDVANNTNEEAGDGTTTATVLA 152
>SB_29096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 47.6 bits (108), Expect = 3e-05
Identities = 20/39 (51%), Positives = 29/39 (74%)
Query: 103 GEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLLQDKI 141
GE +++AEPFL Q +HPT II YR A++D I +L+ +I
Sbjct: 2 GEFMSVAEPFLEQQMHPTQIIAAYRLAMDDMIDILKQQI 40
>SB_3351| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 46.0 bits (104), Expect = 8e-05
Identities = 29/168 (17%), Positives = 75/168 (44%), Gaps = 6/168 (3%)
Query: 140 KISVPVDLNDRDKMKEVIRSCVGTKYIGRWXXXXXXXXXXXXNTVTVNDNGRIEVDIKNY 199
+++V V ND +M++++ C T + + + + +D+
Sbjct: 7 ELAVHVKKNDAGEMRQLLERCAATALSSKLIATQKEFFAKMVVDAVMMLDELLPLDMIG- 65
Query: 200 AKVEKIPGGTVEESRVLSGVMFNKDVTHPKMR---RYIENPRIILLDCPLEYKKGESQTN 256
++K+ GG +E+S ++ GV F K ++ + + +I LL+ LE K +
Sbjct: 66 --MKKVSGGALEDSMLIEGVAFKKTFSYAGFEMQPKTYNHCKIALLNVELELKAEKENAE 123
Query: 257 IEIMGEQDFTKLLQLEEEHVQRQCEEIIALKPDIVFTEKGVSDLAQHY 304
+ + +D+ ++ E + + + ++++ +V ++ + D+A Y
Sbjct: 124 VRLDNVKDYQSIVDAEWDILYDKLDKVVKSGAKVVLSKLPIGDVATQY 171
>SB_26565| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 418
Score = 36.3 bits (80), Expect = 0.062
Identities = 29/139 (20%), Positives = 54/139 (38%), Gaps = 1/139 (0%)
Query: 290 IVFTEKGVSDLAQHYLVKAGITAIRRLRKTDNNRLARACGATIVNR-TEELKESDVGTGA 348
+V +K + + +L + RL N + R GAT+++ T ++ E G
Sbjct: 10 LVACQKCIHPTLKRFLKDRKVYVFDRLSVMHINAVQRLTGATLLSTFTTDIPEHWYGQLD 69
Query: 349 GLFEIKKIGDEYFTFVTECKNPKACTILLRGASKDVLNEIERNLQDALHVAKNLVVSPRL 408
+ Y + CT++L + L E+ Q A+ V +V P +
Sbjct: 70 SIEYTVIANKSYLHLIPTQPMTSVCTVILCSPDESSLEELLSTCQSAMSVLAQVVAYPWV 129
Query: 409 VAGGGAAEMAVSSALSHRA 427
V G G + ++ L +A
Sbjct: 130 VPGAGCMDTHLAGFLRTKA 148
>SB_56236| Best HMM Match : VWA (HMM E-Value=0.16)
Length = 166
Score = 32.3 bits (70), Expect = 1.0
Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 8/122 (6%)
Query: 283 IIALKPDIVF-TEKGVSDLAQHYLVKAGITAIRRLRKTDNNRLARACGATIVNRTEE--L 339
++ + PDI+ T + A LV+ + A ++L T N L T+ E +
Sbjct: 26 LVPVLPDILERTAQLTWTSAAVLLVRTALAASKKLADTSVNALPLMSAKTVTKFIEPFTI 85
Query: 340 KESDVGTGAGLFEIKKIGDEYFTFVTECKNPKACTILLRGASKDVLNEIERNLQDALHVA 399
E+ AG+F +G F F TE + + L G + N+ RNL DAL A
Sbjct: 86 SENKTNVAAGVFA--DVGKLEFLF-TENYDKPSLLAALNGIAYP--NKNARNLSDALIKA 140
Query: 400 KN 401
KN
Sbjct: 141 KN 142
>SB_32940| Best HMM Match : EGF (HMM E-Value=0)
Length = 1025
Score = 32.3 bits (70), Expect = 1.0
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 2/116 (1%)
Query: 229 KMRRYIENPRIILLDCPLEYKKGESQTNIEIMGEQDFTKLLQLEEEHV-QRQCEEIIALK 287
K RR +EN + ++ ++ +K + Q + + L+Q EE+ + Q Q EE + +
Sbjct: 853 KFRRVVENEKRKKMNKEIDQQKEKEQNKYKGVPSWKIPVLIQKEEQRLRQLQAEEEVKKE 912
Query: 288 PDIVFTE-KGVSDLAQHYLVKAGITAIRRLRKTDNNRLARACGATIVNRTEELKES 342
+ E + Q L+K G + + R + + A G+T + T L S
Sbjct: 913 EMTLRAEWDALPPWKQQILLKKGCNPLTKRRVSATTAVPLASGSTSTSSTGSLNGS 968
>SB_12781| Best HMM Match : Spindle_assoc (HMM E-Value=0.12)
Length = 200
Score = 31.9 bits (69), Expect = 1.3
Identities = 29/136 (21%), Positives = 57/136 (41%), Gaps = 3/136 (2%)
Query: 310 ITAIRRLRKTDNNRLARACGATIVNRTEELKESDVGTGAGLFEIKKIGDEYFTFVTECKN 369
I +R+ R +N + A E+KE++ G+G ++ + E V + ++
Sbjct: 18 IELLRQTRSAENVHIEEATSNEKEREATEVKETESNEGSGDALVEILRRENSGLVHQNQD 77
Query: 370 PKACTILLRGASKDVLNEIERNLQDALHVAKNLVVSPRLVAGGGAAEMAVSSALSHRAAH 429
K LR ++ NE+ERN+ + L + + + G +E VSS A
Sbjct: 78 LKIQRDQLRHKVEEKTNEVERNISKTAGIRSELENTKKALKG---SEERVSSLQKTVEAR 134
Query: 430 NTPYRAVATALEIIPR 445
+ R + ++ + R
Sbjct: 135 ESTIRTLECRVDELVR 150
>SB_49413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 33
Score = 29.1 bits (62), Expect = 9.4
Identities = 13/15 (86%), Positives = 15/15 (100%)
Query: 507 TAILLLRIDDIVSGS 521
TA+LLLRIDDIVSG+
Sbjct: 1 TAMLLLRIDDIVSGT 15
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.135 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,007,306
Number of Sequences: 59808
Number of extensions: 558908
Number of successful extensions: 1225
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1176
Number of HSP's gapped (non-prelim): 36
length of query: 540
length of database: 16,821,457
effective HSP length: 86
effective length of query: 454
effective length of database: 11,677,969
effective search space: 5301797926
effective search space used: 5301797926
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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