Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001405-TA|BGIBMGA001405-PA|undefined
(324 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132860-6|CAB60519.2| 457|Caenorhabditis elegans Hypothetical ... 30 1.9
AL034488-13|CAD31697.1| 450|Caenorhabditis elegans Hypothetical... 29 3.4
AC084197-22|AAK68590.2| 1142|Caenorhabditis elegans Suppressor w... 29 3.4
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z49909-5|CAD59140.1| 594|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z49909-4|CAA90108.1| 876|Caenorhabditis elegans Hypothetical pr... 29 4.4
AY303577-1|AAP57299.1| 876|Caenorhabditis elegans cell death-re... 29 4.4
Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z79596-7|CAB01859.1| 872|Caenorhabditis elegans Hypothetical pr... 29 5.9
AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical ... 29 5.9
AC087794-2|AAG53703.2| 840|Caenorhabditis elegans Hypothetical ... 29 5.9
Z75710-2|CAB00024.1| 741|Caenorhabditis elegans Hypothetical pr... 28 7.8
>AL132860-6|CAB60519.2| 457|Caenorhabditis elegans Hypothetical
protein Y56A3A.7 protein.
Length = 457
Score = 30.3 bits (65), Expect = 1.9
Identities = 12/41 (29%), Positives = 26/41 (63%)
Query: 281 MKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
+ NL + + L ++++T G+ +N DD E+L++ +E+D
Sbjct: 410 LSNLTAMRERLEHIKETGGADLNEDDLTLLERLDNVALEED 450
>AL034488-13|CAD31697.1| 450|Caenorhabditis elegans Hypothetical
protein Y54G11A.14 protein.
Length = 450
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 292 NNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
N D + N+DDED DE+ E D E+D
Sbjct: 42 NEDEDEDEDDDNDDDEDDDEEEEDEDEEED 71
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 293 NVRDTEGSKVNNDDEDRDEKLESSDVEDDVID 324
N D EG ++D+E+ +E+ E + E+DV D
Sbjct: 208 NPDDDEGVMGDDDEEEEEEEEEEEEEEEDVAD 239
>AC084197-22|AAK68590.2| 1142|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 3 protein.
Length = 1142
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 289 DNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
D LN + E ++DE+RD +L+ D E+D
Sbjct: 918 DGLNELNVIEEDDEEDEDENRDSELDEDDSEED 950
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 29.1 bits (62), Expect = 4.4
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 226 NVDVSQTDDPEKRLGRDFGRRHLSAFSVPVRSNNGTPDKIFNQNKIGKANGTSYVMKNLK 285
N+D+ +TD PEK RD +R++ NG + FN +KI S K +
Sbjct: 1802 NIDMKETDMPEKE--RD-DQRYVDVHRDKKPFENGEFEPTFNGSKI------SNEPKQIS 1852
Query: 286 RVYDNLNNVRDTEGSKVNNDD 306
NL+NV TE K+ +D
Sbjct: 1853 ITTINLDNVFPTEEPKLVAED 1873
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 29.1 bits (62), Expect = 4.4
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 226 NVDVSQTDDPEKRLGRDFGRRHLSAFSVPVRSNNGTPDKIFNQNKIGKANGTSYVMKNLK 285
N+D+ +TD PEK RD +R++ NG + FN +KI S K +
Sbjct: 1802 NIDMKETDMPEKE--RD-DQRYVDVHRDKKPFENGEFEPTFNGSKI------SNEPKQIS 1852
Query: 286 RVYDNLNNVRDTEGSKVNNDD 306
NL+NV TE K+ +D
Sbjct: 1853 ITTINLDNVFPTEEPKLVAED 1873
>Z49909-5|CAD59140.1| 594|Caenorhabditis elegans Hypothetical
protein C14A4.4b protein.
Length = 594
Score = 29.1 bits (62), Expect = 4.4
Identities = 29/107 (27%), Positives = 41/107 (38%), Gaps = 16/107 (14%)
Query: 202 DPLNFFIDLRVSGHIYDRKR-VAPDNVDVS-------QTDDPEKRLGRD--------FGR 245
DP F D +S RKR A N+DVS + DP+K+ D + +
Sbjct: 485 DPSRFTDDQLLSKKAMKRKRDAARRNIDVSVVLGESSSSSDPKKKKSDDDAPVEDFDYEK 544
Query: 246 RHLSAFSVPVRSNNGTPDKIFNQNKIGKANGTSYVMKNLKRVYDNLN 292
SAF PVR NN D + ++ + MK +N
Sbjct: 545 ADSSAFEKPVRDNNADFDPFHQKYRLKNKTKKNMAMKKSSNRQGTIN 591
>Z49909-4|CAA90108.1| 876|Caenorhabditis elegans Hypothetical
protein C14A4.4a protein.
Length = 876
Score = 29.1 bits (62), Expect = 4.4
Identities = 29/107 (27%), Positives = 41/107 (38%), Gaps = 16/107 (14%)
Query: 202 DPLNFFIDLRVSGHIYDRKR-VAPDNVDVS-------QTDDPEKRLGRD--------FGR 245
DP F D +S RKR A N+DVS + DP+K+ D + +
Sbjct: 767 DPSRFTDDQLLSKKAMKRKRDAARRNIDVSVVLGESSSSSDPKKKKSDDDAPVEDFDYEK 826
Query: 246 RHLSAFSVPVRSNNGTPDKIFNQNKIGKANGTSYVMKNLKRVYDNLN 292
SAF PVR NN D + ++ + MK +N
Sbjct: 827 ADSSAFEKPVRDNNADFDPFHQKYRLKNKTKKNMAMKKSSNRQGTIN 873
>AY303577-1|AAP57299.1| 876|Caenorhabditis elegans cell
death-related nuclease 3 protein.
Length = 876
Score = 29.1 bits (62), Expect = 4.4
Identities = 29/107 (27%), Positives = 41/107 (38%), Gaps = 16/107 (14%)
Query: 202 DPLNFFIDLRVSGHIYDRKR-VAPDNVDVS-------QTDDPEKRLGRD--------FGR 245
DP F D +S RKR A N+DVS + DP+K+ D + +
Sbjct: 767 DPSRFTDDQLLSKKAMKRKRDAARRNIDVSVVLGESSSSSDPKKKKSDDDAPVEDFDYEK 826
Query: 246 RHLSAFSVPVRSNNGTPDKIFNQNKIGKANGTSYVMKNLKRVYDNLN 292
SAF PVR NN D + ++ + MK +N
Sbjct: 827 ADSSAFEKPVRDNNADFDPFHQKYRLKNKTKKNMAMKKSSNRQGTIN 873
>Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 285 KRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
K+ + + D E ++DDED D ++ +D EDD
Sbjct: 384 KKTKSMVERILDDEFDDEDDDDEDDDSEVNKNDREDD 420
>Z79596-7|CAB01859.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 285 KRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
K+ + + D E ++DDED D ++ +D EDD
Sbjct: 384 KKTKSMVERILDDEFDDEDDDDEDDDSEVNKNDREDD 420
>AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical
protein T22B2.1 protein.
Length = 955
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 268 QNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGS 300
QN I +NG V + + +YDNLN R GS
Sbjct: 45 QNLIDASNGKLMVYGSAREIYDNLNLFRRFPGS 77
>AC087794-2|AAG53703.2| 840|Caenorhabditis elegans Hypothetical
protein Y32G9A.6 protein.
Length = 840
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/99 (17%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Query: 226 NVDVSQTDDPEKRLGRDFGRRHLSAF-SVPVRSNNGTPDKIFNQNKIGKANGTSYV-MKN 283
++ + ++ P+++ + +L+ S+P + + I N K + ++ + +
Sbjct: 473 SIKSADSNAPKRKYSKSTSVTNLTEIPSIPKKELEALKESIENGQKFVDDDAEDHLDILD 532
Query: 284 LKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDDV 322
+ ++NL + D S + D++ ++K + DVE V
Sbjct: 533 VDDEFENLPPISDLSESSTSTDNDSEEDKSDDEDVERKV 571
>Z75710-2|CAB00024.1| 741|Caenorhabditis elegans Hypothetical
protein D1081.3 protein.
Length = 741
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 285 KRVYDNLNNV-RDTEGSKVNN-DDEDRDEKLES-SDVEDDVID 324
K ++D ++ +D GS +N +D+D DE + D E+DVID
Sbjct: 684 KAMFDQFDSPEQDARGSVINEKEDDDDDEDCDDFEDDEEDVID 726
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.315 0.132 0.383
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,403,965
Number of Sequences: 27539
Number of extensions: 291009
Number of successful extensions: 942
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 924
Number of HSP's gapped (non-prelim): 24
length of query: 324
length of database: 12,573,161
effective HSP length: 82
effective length of query: 242
effective length of database: 10,314,963
effective search space: 2496221046
effective search space used: 2496221046
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 60 (28.3 bits)
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