Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001405-TA|BGIBMGA001405-PA|undefined
(324 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.078
SB_38212| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.078
SB_27306| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.078
SB_32196| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_31543| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.18
SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3) 34 0.18
SB_38303| Best HMM Match : Fz (HMM E-Value=9.8e-07) 33 0.24
SB_5243| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_54036| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_28750| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.42
SB_22325| Best HMM Match : Nucleoplasmin (HMM E-Value=5.8) 33 0.42
SB_5838| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.42
SB_30774| Best HMM Match : Vpu (HMM E-Value=5.7) 33 0.42
SB_46013| Best HMM Match : DUF1129 (HMM E-Value=0.23) 32 0.73
SB_23116| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.73
SB_48994| Best HMM Match : ASC (HMM E-Value=1.3e-11) 31 0.96
SB_3920| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.96
SB_27830| Best HMM Match : Mak16 (HMM E-Value=0.49) 31 0.96
SB_17752| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.96
SB_45349| Best HMM Match : rve (HMM E-Value=6.1e-31) 31 1.3
SB_28304| Best HMM Match : zf-C2H2 (HMM E-Value=2.8026e-45) 31 1.3
SB_37031| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_54719| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.045) 31 1.7
SB_55491| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_25796| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_13452| Best HMM Match : Mak16 (HMM E-Value=2.6) 30 2.2
SB_11711| Best HMM Match : 7tm_1 (HMM E-Value=8.5e-10) 30 2.2
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 30 2.2
SB_37878| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.9
SB_54927| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_36754| Best HMM Match : DUF308 (HMM E-Value=1.1) 29 3.9
SB_19851| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_55700| Best HMM Match : tRNA_bind (HMM E-Value=0.79) 29 3.9
SB_48720| Best HMM Match : DAGAT (HMM E-Value=1.5e-09) 29 3.9
SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_3318| Best HMM Match : Xan_ur_permease (HMM E-Value=7.20267e-43) 29 3.9
SB_57501| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_56816| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_35947| Best HMM Match : IQ (HMM E-Value=0.00061) 29 5.1
SB_61| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_55933| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_54008| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_45284| Best HMM Match : Nucleoplasmin (HMM E-Value=8.7e-10) 29 6.8
SB_36679| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_34845| Best HMM Match : CXC (HMM E-Value=0.03) 29 6.8
SB_3357| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_50641| Best HMM Match : Rad21_Rec8_N (HMM E-Value=0) 29 6.8
SB_32607| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_30297| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_20991| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_13856| Best HMM Match : CXC (HMM E-Value=0.021) 29 6.8
SB_53103| Best HMM Match : DUF1388 (HMM E-Value=0.29) 28 9.0
SB_51758| Best HMM Match : MNNL (HMM E-Value=1.2) 28 9.0
SB_51066| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_27829| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_15286| Best HMM Match : I-set (HMM E-Value=0.72) 28 9.0
SB_39141| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_12884| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_2546| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_1065| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
>SB_40812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1168
Score = 35.1 bits (77), Expect = 0.078
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 242 DFGRRHLSAFSVPVRSNNGTPDKIFNQNKIG--KANGTSYVMKNLKRVYDNLNNVR-DTE 298
D R+ + VP+ + + +I + +K G KA + K + V NL+N TE
Sbjct: 123 DRKRKFTESEGVPI-NQHAIQSQIISSDKKGRKKAKKVRLIKKACQPVPGNLSNDNAGTE 181
Query: 299 GSKVNNDDEDRDEKLESSDVEDDVID 324
+ N+DD+D D+ + D +DD ++
Sbjct: 182 SGESNDDDDDGDDDDDDDDDDDDGVE 207
>SB_38212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1892
Score = 35.1 bits (77), Expect = 0.078
Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 255 VRSNNGTPDKIFNQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLE 314
+R+N + QN + K + ++ + KN + + NNV T NND++D D+ +
Sbjct: 1749 IRANESPTPVLLRQN-LPKTHPSNSLEKNSRTCDSHTNNVNQTSDVTDNNDEDDDDD--D 1805
Query: 315 SSDVEDDVI 323
D +DD++
Sbjct: 1806 DDDDDDDMM 1814
>SB_27306| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 153
Score = 35.1 bits (77), Expect = 0.078
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 247 HLSAFSVPVRSNNGTPDKIFNQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDD 306
H++ + +NN +K N NK N + N +N NN D + ++DD
Sbjct: 58 HIACYGYQTFNNNNNNNKN-NNNKNNNNNNNNNNNNNNNNNNNNNNNDDDDDDDDDDDDD 116
Query: 307 EDRDEKLESSDVEDD 321
+D D+ + D +DD
Sbjct: 117 DDDDDDDDDDDDDDD 131
>SB_32196| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1333
Score = 34.3 bits (75), Expect = 0.14
Identities = 22/84 (26%), Positives = 37/84 (44%)
Query: 241 RDFGRRHLSAFSVPVRSNNGTPDKIFNQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGS 300
R+ GR+ S V R+ + + + N N N + N +N NN +
Sbjct: 238 RETGRQRRSTHHVMRRAVSHSYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNND 297
Query: 301 KVNNDDEDRDEKLESSDVEDDVID 324
++DD+D D+ + D +DDV D
Sbjct: 298 DYDDDDDDDDDCDDDDDDDDDVDD 321
Score = 28.7 bits (61), Expect = 6.8
Identities = 24/114 (21%), Positives = 45/114 (39%)
Query: 208 IDLRVSGHIYDRKRVAPDNVDVSQTDDPEKRLGRDFGRRHLSAFSVPVRSNNGTPDKIFN 267
++L V + + VA +V V+ + +R R + S +NN + N
Sbjct: 214 LELTVQANKGADQSVAKAHVRVTVRETGRQRRSTHHVMRRAVSHSYNNNNNNNNNNNNNN 273
Query: 268 QNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
N N + N +N + D + +DD+D D+ ++ D +DD
Sbjct: 274 NNNNNNNNNNNNNNNNNNNNNNNDDYDDDDDDDDDCDDDDDDDDDVDDDDDDDD 327
>SB_31543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 33.9 bits (74), Expect = 0.18
Identities = 28/83 (33%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Query: 231 QTDDPEKRLGRDFGRRHLSAFSVPVRSNNGTPDKIFNQNKIGKANGTSYVMKNLKRVYDN 290
QT PE L RD ++ F P S + + N NG Y KN R DN
Sbjct: 181 QTRAPEDEL-RD---SYVKYFGKPEDSPHSPYLRSLNSVGDTDKNGWRYPNKNTLRDVDN 236
Query: 291 LNNVRDTEGSKVNNDDEDRDEKL 313
+ RD + N D+ RDEKL
Sbjct: 237 VRQSRDNKDGSRNADNRLRDEKL 259
>SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3)
Length = 189
Score = 33.9 bits (74), Expect = 0.18
Identities = 18/67 (26%), Positives = 30/67 (44%)
Query: 255 VRSNNGTPDKIFNQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLE 314
+ +NN + N N I N + N +N NN + + NN+D+D D+ +
Sbjct: 93 INNNNNNNNNNNNINNINNNNNNNNNNINNNNNNNNNNNNNNNNNNNNNNNDDDDDDDDD 152
Query: 315 SSDVEDD 321
D +DD
Sbjct: 153 DDDDDDD 159
Score = 33.9 bits (74), Expect = 0.18
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 257 SNNGTPDKIFNQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESS 316
+NN + I N N N + + N +N NN + + NNDD+D D+ +
Sbjct: 98 NNNNNNNNINNINNNNNNNNNN--INNNNNNNNNNNNNNNNNNNNNNNDDDDDDDDDDDD 155
Query: 317 DVEDD 321
D +DD
Sbjct: 156 DDDDD 160
Score = 31.5 bits (68), Expect = 0.96
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 258 NNGTPDKIFNQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSD 317
NN + N N I N + N +N NN D + ++DD+D D+ + D
Sbjct: 107 NNINNNNNNNNNNINNNNNNNNNNNNNNNNNNNNNNNDDDDDDDDDDDDDDDDDDDDDDD 166
Query: 318 VEDD 321
+DD
Sbjct: 167 DDDD 170
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/65 (26%), Positives = 28/65 (43%)
Query: 257 SNNGTPDKIFNQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESS 316
+NN + I N N N + N +N NN + ++DD+D D+ +
Sbjct: 101 NNNNNINNINNNNNNNNNNINNNNNNNNNNNNNNNNNNNNNNNDDDDDDDDDDDDDDDDD 160
Query: 317 DVEDD 321
D +DD
Sbjct: 161 DDDDD 165
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Query: 257 SNNGTPDKIFNQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESS 316
+NN + I N N N + N +N NN D + ++DD+D D+ +
Sbjct: 112 NNNNNNNNINNNNNNNNNNNNNNNNNN-----NNNNNDDDDDDDDDDDDDDDDDDDDDDD 166
Query: 317 DVEDDVID 324
D +DD D
Sbjct: 167 DDDDDDFD 174
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/65 (24%), Positives = 27/65 (41%)
Query: 257 SNNGTPDKIFNQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESS 316
+NN N N N + N +N NN + + ++DD+D D+ +
Sbjct: 100 NNNNNNINNINNNNNNNNNNINNNNNNNNNNNNNNNNNNNNNNNDDDDDDDDDDDDDDDD 159
Query: 317 DVEDD 321
D +DD
Sbjct: 160 DDDDD 164
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Query: 255 VRSNNGTPDKIFNQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLE 314
+ +NN + N N N + N +N N+ D + ++DD+D D+ +
Sbjct: 109 INNNNNNNNNNINNNNNNNNNNNN---NNNNNNNNNNNDDDDDDDDDDDDDDDDDDDDDD 165
Query: 315 SSDVEDDVID 324
D +DD D
Sbjct: 166 DDDDDDDFDD 175
>SB_38303| Best HMM Match : Fz (HMM E-Value=9.8e-07)
Length = 528
Score = 33.5 bits (73), Expect = 0.24
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 252 SVPVRSNNGTPDKIFNQNKIGKANGTSYVMK---NLKRVYDNLNNVRDTEGSKVN---ND 305
S V+ P K + K G T+ K +L++ D L+ V TEG+ D
Sbjct: 383 SPKVQEPTKRPSKQVTELKAGATQPTAATKKAGLDLEKSMDGLDPVSPTEGATAGITAKD 442
Query: 306 DEDRDEKLESSDVEDDVI 323
D+D D++ ++ + +DDV+
Sbjct: 443 DDDSDDESDTKNDDDDVV 460
>SB_5243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 924
Score = 33.1 bits (72), Expect = 0.32
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 280 VMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
++K +++Y L +RD S + DD+D D+ + D +DD
Sbjct: 732 MLKECQKIYPPLRRIRDEHLSDTSYDDDDDDDDDDDDDDDDD 773
>SB_54036| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 114
Score = 33.1 bits (72), Expect = 0.32
Identities = 17/65 (26%), Positives = 30/65 (46%)
Query: 257 SNNGTPDKIFNQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESS 316
+NN + N N N + +KN +N NN + + NN+++D D+ +
Sbjct: 48 NNNNNNNNNNNNNNNNNNNNNNNNIKNNNNNNNNNNNKNNNNNNNNNNNNDDDDDDDDVD 107
Query: 317 DVEDD 321
D +DD
Sbjct: 108 DGDDD 112
Score = 32.3 bits (70), Expect = 0.55
Identities = 16/64 (25%), Positives = 29/64 (45%)
Query: 257 SNNGTPDKIFNQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESS 316
+NN + N N N + N+K +N NN + + NN++ + D+ +
Sbjct: 45 NNNNNNNNNNNNNNNNNNNNNNNNNNNIKNNNNNNNNNNNKNNNNNNNNNNNNDDDDDDD 104
Query: 317 DVED 320
DV+D
Sbjct: 105 DVDD 108
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/65 (24%), Positives = 27/65 (41%)
Query: 257 SNNGTPDKIFNQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESS 316
+NN + N N N + N +N N + + NNDD+D D+ ++
Sbjct: 50 NNNNNNNNNNNNNNNNNNNNNNIKNNNNNNNNNNNKNNNNNNNNNNNNDDDDDDDDVDDG 109
Query: 317 DVEDD 321
D + D
Sbjct: 110 DDDYD 114
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/68 (25%), Positives = 28/68 (41%)
Query: 257 SNNGTPDKIFNQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESS 316
+NN + N N N + N N NN + +K NN++ + + +
Sbjct: 41 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNIKNNNNNNNNNNNKNNNNNNNNNNNNDDD 100
Query: 317 DVEDDVID 324
D +DDV D
Sbjct: 101 DDDDDVDD 108
>SB_28750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 32.7 bits (71), Expect = 0.42
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 257 SNNGTPDKIFNQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESS 316
S N +K N N N + N +N NN + + S ++DD+D D+ +
Sbjct: 5 SGNNNNNKNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNDDNSDEDDDDDDDDDDDDDG 64
Query: 317 DVEDD 321
D +DD
Sbjct: 65 DNDDD 69
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/58 (27%), Positives = 25/58 (43%)
Query: 264 KIFNQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
K N K N + N +N NN + + NN+D++ DE + D +DD
Sbjct: 3 KSSGNNNNNKNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNDDNSDEDDDDDDDDDD 60
>SB_22325| Best HMM Match : Nucleoplasmin (HMM E-Value=5.8)
Length = 282
Score = 32.7 bits (71), Expect = 0.42
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 283 NLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
N + +N NN+ + + N+DD+D D+ + D +DD
Sbjct: 141 NNNNINNNNNNINNNNNNNYNDDDDDDDDDDDDDDDDDD 179
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/55 (25%), Positives = 26/55 (47%)
Query: 267 NQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
N N N + + N + +N NN + + ++DD+D D+ + D +DD
Sbjct: 132 NNNNNNNNNNNNNINNNNNNINNNNNNNYNDDDDDDDDDDDDDDDDDDDDDDDDD 186
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/55 (25%), Positives = 26/55 (47%)
Query: 267 NQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
N N N + N+ +N+NN + + ++DD+D D+ + D +DD
Sbjct: 128 NNNNNNNNNNNNNNNNNINNNNNNINNNNNNNYNDDDDDDDDDDDDDDDDDDDDD 182
>SB_5838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 85
Score = 32.7 bits (71), Expect = 0.42
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 288 YDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
Y+N NN + + NNDD+D D+ + D +DD
Sbjct: 45 YNNNNNNNNNNNNNNNNDDDDDDDDDDDDDDDDD 78
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 281 MKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
+KN + +N NN + + NN++ D D+ + D +DD
Sbjct: 35 LKNRNALGENYNNNNNNNNNNNNNNNNDDDDDDDDDDDDDD 75
>SB_30774| Best HMM Match : Vpu (HMM E-Value=5.7)
Length = 161
Score = 32.7 bits (71), Expect = 0.42
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 286 RVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDDVI 323
R + +RD +G++ N +++D DE + DV+ DV+
Sbjct: 103 RFQERAEEIRDPKGNQDNEEEDDDDEDDDDDDVDTDVV 140
>SB_46013| Best HMM Match : DUF1129 (HMM E-Value=0.23)
Length = 553
Score = 31.9 bits (69), Expect = 0.73
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query: 245 RRHLSAFSVPVRSNNGTPDKIFNQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNN 304
+R L++ ++ R NN N N++ A S + N +YDN N++ D + S +N
Sbjct: 243 QRALTSAAIAARKNND------NNNRVKGA--ASCIYDNDNSIYDNDNSINDNDNSINDN 294
Query: 305 DDEDRDEKLESSDVEDDVID 324
D+ D D ++ + D
Sbjct: 295 DNSINDNDNSIYDNDNSIND 314
Score = 31.5 bits (68), Expect = 0.96
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 267 NQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDDVID 324
N N I N S + N +YDN N++ D + S +ND+ D +D ++ + D
Sbjct: 329 NDNSIYD-NDNSSIYDNDNSIYDNDNSINDNDNSINDNDNSINDNDNSINDNDNSIND 385
Score = 29.9 bits (64), Expect = 2.9
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 267 NQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDDVID 324
N N I + + Y N +YDN N++ D + S +ND+ D +D ++ + D
Sbjct: 322 NDNSINDNDNSIYDNDN-SSIYDNDNSIYDNDNSINDNDNSINDNDNSINDNDNSIND 378
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 263 DKIFNQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDD--EDRDEKLESSD 317
D N N + + + N +YDN N++ D + S +ND+ D D + +D
Sbjct: 281 DNSINDNDNSINDNDNSINDNDNSIYDNDNSINDNDNSINDNDNSINDNDNSIYDND 337
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 263 DKIFNQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDD--EDRDEKLESSDVED 320
D N N + + + N + DN N++ D + S +ND+ D D + S + D
Sbjct: 460 DNSINDNDNSINDNDNSINDNDNSINDNDNSINDNDNSINDNDNSINDNDNSINDSSIND 519
Query: 321 D 321
+
Sbjct: 520 N 520
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 257 SNNGTPDKIFNQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESS 316
++N D N N + + + N + DN N++ D + S +ND+ D +
Sbjct: 440 NDNSIYDNSINDNDNSINDNDNSINDNDNSINDNDNSINDNDNSINDNDNSINDNDNSIN 499
Query: 317 DVEDDVID 324
D ++ + D
Sbjct: 500 DNDNSIND 507
>SB_23116| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 31.9 bits (69), Expect = 0.73
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 252 SVPVRSNNGTPDKIFNQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDE 311
SV VR N GT I N + K + ++Y N DN NN + + + NNDD+D ++
Sbjct: 84 SVLVRPN-GTEMLIDNDDN--KNDSSNYDNNNYNN--DNDNNDNNNKNNNNNNDDDDNNK 138
Query: 312 KLESSDVEDD 321
D +D+
Sbjct: 139 NDNDDDYDDN 148
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 289 DNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
+N NN D + +K +NDD+ D + D +DD
Sbjct: 126 NNNNNNDDDDNNKNDNDDDYDDNNNNNDDYDDD 158
>SB_48994| Best HMM Match : ASC (HMM E-Value=1.3e-11)
Length = 538
Score = 31.5 bits (68), Expect = 0.96
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 270 KIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
K+ N + N +N NN + + NNDD+D D+ + D +DD
Sbjct: 476 KVNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNDDDDDDDDDDDDDDDDD 527
>SB_3920| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 31.5 bits (68), Expect = 0.96
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 255 VRSNNGTPDKIFNQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLE 314
+RS N P + F +N+I N + N +N NN + + NNDD+D D+ +
Sbjct: 145 LRSTNMNPYRKF-ENQIIIINNNN----NNNNNNNNNNNNNNNNNNNNNNDDDDDDDDDD 199
Query: 315 SSDVEDD 321
D +DD
Sbjct: 200 DDDDDDD 206
>SB_27830| Best HMM Match : Mak16 (HMM E-Value=0.49)
Length = 132
Score = 31.5 bits (68), Expect = 0.96
Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 275 NGT-SYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
+GT Y+++ L+R+ + V T G+ ++DD+D D+ + D +DD
Sbjct: 51 HGTPGYLLQKLQRLQNAAARVNFTRGNDDDDDDDDVDDDDDDGDGDDD 98
>SB_17752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 513
Score = 31.5 bits (68), Expect = 0.96
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 267 NQNKIGKANGTSYV-MKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
N N IG + YV + D+ N++ D + ++DD+D D+ E D EDD
Sbjct: 442 NNNGIGDDDKDGYVGYDDDNNSRDDDNDISDDDDDDDDDDDDDGDDDDEDDDDEDD 497
>SB_45349| Best HMM Match : rve (HMM E-Value=6.1e-31)
Length = 298
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/54 (24%), Positives = 30/54 (55%)
Query: 268 QNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
+NK+ + + + ++K + +N NN + + ++DD+D D+ + D +DD
Sbjct: 210 RNKLSQKSYADDKLFDIKLINNNNNNNNNNNNNNDDDDDDDDDDDDDDDDDDDD 263
>SB_28304| Best HMM Match : zf-C2H2 (HMM E-Value=2.8026e-45)
Length = 243
Score = 31.1 bits (67), Expect = 1.3
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 34 ATPPYLYSALPLQPHAFFFSEMLRSFVNARHGCRPP 69
A PP S LP+ P AF ++S +RHG P
Sbjct: 61 AMPPVFSSGLPIMPRAFHSRSPVKSSSESRHGLISP 96
>SB_37031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 258 NNGTPDKIFNQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSD 317
N+G+ + N + + +G V ++ VYD++ ++ D + + V DD+D D+ + D
Sbjct: 10 NDGSDNSDNNDDNVDDNDGDDDVDDDV--VYDDVGDIADDDNAFVVLDDDDDDDDDDDDD 67
Query: 318 VEDD 321
+D+
Sbjct: 68 DDDN 71
>SB_54719| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.045)
Length = 782
Score = 30.7 bits (66), Expect = 1.7
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
Query: 215 HIYDRKRVAPDNVDVSQTDDPEKRLGRDFGRRHLSAFSVPVRSNNGTPDKIFNQNKIG-- 272
H +++R P V ++ EKR SA S R + T + + +G
Sbjct: 162 HRINKRRSIPVYVFRRKSQKNEKRRSVAPVIPEDSALSFETRKHLSTSNTCDREGIVGGK 221
Query: 273 -KANGTSYVMKN-LKRVYDNLNNVRDTEGS--KVNNDDEDRDEKLESSDVED 320
K G + + N KRV D+ NNV DTE S K+ + +D E++ S + D
Sbjct: 222 LKILGDANSLSNDEKRVLDSHNNVNDTESSTVKLEKEMDDFSERIVSQVLFD 273
>SB_55491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 288 YDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
YD+ ++ D G +NDD+D D+ + +D +DD
Sbjct: 66 YDDNDDDNDDNGDDDDNDDDDDDDDDDDADDDDD 99
>SB_25796| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 123
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 287 VYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDDVID 324
V D+ ++ D + VN+DD+D D+ + D +DD +D
Sbjct: 78 VDDDDVDIGDDDDDDVNDDDDDVDDDDDDVDDDDDAVD 115
>SB_13452| Best HMM Match : Mak16 (HMM E-Value=2.6)
Length = 163
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 289 DNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
+N NN + + NNDD+D D+ + D +DD
Sbjct: 108 NNSNNNNNNNNNNNNNDDDDDDDDDDDDDDDDD 140
>SB_11711| Best HMM Match : 7tm_1 (HMM E-Value=8.5e-10)
Length = 948
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 289 DNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
+N NN + + NNDD+D D+ + D +DD
Sbjct: 28 NNSNNNNNNNNNNNNNDDDDDDDDDDDDDDDDD 60
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 7/85 (8%)
Query: 244 GRRHLSAFSVPVRSNNGTPDKIFNQNKIGKANGTSYVMKNLKRVYDN------LNNVRDT 297
GR HLS P + +N + N ++ YD L +
Sbjct: 517 GREHLSRDRNDKHKQKALPKETLTENN-ARENARENALEKNANGYDKKTEKKKLEKLDRK 575
Query: 298 EGSKVNNDDEDRDEKLESSDVEDDV 322
+G +D +D ++ LES D E+D+
Sbjct: 576 DGGNERSDSDDEEKDLESKDEENDI 600
>SB_37878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/50 (28%), Positives = 25/50 (50%)
Query: 272 GKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
GK + + K+ +N NN D + ++DD+D D+ + D +DD
Sbjct: 11 GKVKNLTLIEKSTYNNNNNNNNNDDDDDDDDDDDDDDDDDDDDDDDDDDD 60
>SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 255 VRSNNGTPDKIFNQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLE 314
VRSN G D+ Q+ N T + ++ D+ DT+ ++++ D+ EK
Sbjct: 252 VRSNRGNLDE---QSTEANGNNTDTHSDDSEKDSDDDEKSADTKNDEISDSDKSDTEKDA 308
Query: 315 SSDVEDD 321
SD E+D
Sbjct: 309 DSDSEND 315
>SB_54927| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 287 VYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
+Y+N NN D + ++DD+D D+ + D +DD
Sbjct: 10 LYNNNNNNDDDDDDDDDDDDDDDDDDDDDEDDDDD 44
>SB_36754| Best HMM Match : DUF308 (HMM E-Value=1.1)
Length = 179
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/37 (32%), Positives = 19/37 (51%)
Query: 285 KRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
+ + + N+ GS V +D+ED DE D +DD
Sbjct: 47 RNIREGFRNISLASGSAVGSDNEDDDEDENDGDDDDD 83
>SB_19851| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 289 DNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
DN + D + NNDD+D D+ + D EDD
Sbjct: 108 DNDDGDNDDDDDDDNNDDDDDDDDDDDDDDEDD 140
>SB_55700| Best HMM Match : tRNA_bind (HMM E-Value=0.79)
Length = 632
Score = 29.5 bits (63), Expect = 3.9
Identities = 9/41 (21%), Positives = 25/41 (60%)
Query: 246 RHLSAFSVPVRSNNGTPDKIFNQNKIGKANGTSYVMKNLKR 286
+ +S+ + + N G PD++ N+ K+G+ + ++K+ ++
Sbjct: 70 KRMSSIILAEKENAGLPDELSNKQKVGQTTNNTSILKSSQK 110
>SB_48720| Best HMM Match : DAGAT (HMM E-Value=1.5e-09)
Length = 244
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 289 DNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDDVID 324
DN N+ D + + +DD D D+ + D++DD D
Sbjct: 158 DNDNDDSDVDDNDFYDDDNDDDDDDDDDDIDDDTND 193
>SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3292
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 267 NQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
N N I + TS + N +N NN D + N++D D D ++ + D+
Sbjct: 1669 NNNAIATSTTTSTSIGNNNNNNNNNNNDNDNDNDNDNDNDNDNDNDNDNDNDNDN 1723
>SB_3318| Best HMM Match : Xan_ur_permease (HMM E-Value=7.20267e-43)
Length = 774
Score = 29.5 bits (63), Expect = 3.9
Identities = 16/65 (24%), Positives = 29/65 (44%)
Query: 257 SNNGTPDKIFNQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESS 316
+NN + N N N + N D+ ++ D + + ++DDED D+ +
Sbjct: 584 NNNDNNNNNNNNNNNNNNNNNNNNNNNNNNNADDDDDAADDDDADDDDDDEDDDDDEDDD 643
Query: 317 DVEDD 321
D +DD
Sbjct: 644 DDDDD 648
>SB_57501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 29.1 bits (62), Expect = 5.1
Identities = 11/33 (33%), Positives = 22/33 (66%)
Query: 289 DNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
D+ ++ +D + V++DD+D D+ + SD +DD
Sbjct: 79 DDNDDDKDDDDDDVDDDDDDNDDDDDDSDDDDD 111
>SB_56816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1200
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 289 DNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
D+ N+V D + V++DD+D D+ D +DD
Sbjct: 1003 DDDNDVDDDDDDDVDDDDDDDDDDDVDDDADDD 1035
>SB_35947| Best HMM Match : IQ (HMM E-Value=0.00061)
Length = 1060
Score = 29.1 bits (62), Expect = 5.1
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 291 LNNVRDTEGSKVNNDDEDRDEKLESSDVEDDV 322
++ V +GS+ DDED++E++E D E ++
Sbjct: 680 IDGVGQPKGSRSYLDDEDKEEEVEVEDTEPEI 711
>SB_61| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 123
Score = 29.1 bits (62), Expect = 5.1
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 296 DTEGSKVNNDDEDRDEKLESSDVEDDVID 324
D + ++DD+D D+ ++ D +DDV+D
Sbjct: 5 DDDDDDDDDDDDDDDDDVDDDDDDDDVVD 33
>SB_55933| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 489
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 289 DNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDDVID 324
D+ +N + + K++ DD+D D D DD +D
Sbjct: 429 DDYDNDGNNDDYKIDGDDDDYDNDGNDDDYNDDYVD 464
>SB_54008| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1940
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 267 NQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSDVED 320
N N G NG N + L++ D E + ++DD+D D+K + D +D
Sbjct: 131 NGNSGGDGNGEDNDDSNDDDDDEYLDDDEDEEEEEEDDDDDDDDDKNDDDDEDD 184
>SB_45284| Best HMM Match : Nucleoplasmin (HMM E-Value=8.7e-10)
Length = 282
Score = 28.7 bits (61), Expect = 6.8
Identities = 22/107 (20%), Positives = 47/107 (43%), Gaps = 11/107 (10%)
Query: 225 DNVDVSQTDDPEKRLGRDFGRRHLSAFSVPVRSNNGTPDKIFNQNKIGKANGTSYVMKNL 284
D+ S++++ E+ +D + + + V S+ P K+ K ++ + +
Sbjct: 106 DDESESESEEEEEEAAKDIKKPDVQKRPLAVNSDKSPPKKVAKVEKDSDSDEEESEEEGM 165
Query: 285 K------RVYDNL----NNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
+ +Y +L N+ D E + ++D ED +E + D EDD
Sbjct: 166 ELDKVKQNIYQSLFEFKGNLFDKEAEEASSD-EDEEEDSDEDDDEDD 211
>SB_36679| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 199
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 292 NNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
NN D + N+DD+D D+ + D +DD
Sbjct: 45 NNNNDNDNDNDNDDDDDDDDDDDDDDDDDD 74
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 289 DNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
+N NN D + ++DD+D D+ + D +DD
Sbjct: 44 NNNNNDNDNDNDNDDDDDDDDDDDDDDDDDDDD 76
>SB_34845| Best HMM Match : CXC (HMM E-Value=0.03)
Length = 1397
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 293 NVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
N D + NND+ED +E+ + D +DD
Sbjct: 426 NGEDCQNKSGNNDEEDNEEESDYDDDDDD 454
>SB_3357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1228
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 4/30 (13%)
Query: 296 DTEGSKV---NNDDEDRDEKLESSDVEDDV 322
+TEG K N DD++RDE +SSD +DV
Sbjct: 682 ETEGDKADKNNGDDKNRDES-DSSDTNEDV 710
>SB_50641| Best HMM Match : Rad21_Rec8_N (HMM E-Value=0)
Length = 816
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 289 DNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDDV 322
+NL N + E S ++E+ +EK+E D+E DV
Sbjct: 632 ENLTN-KIAEDSAQKEEEEESEEKMEVEDIEPDV 664
>SB_32607| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 257 SNNGTPDKIFNQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDE 311
++N D N+N ++ YV N YD+ +N +GS NNDD+D +
Sbjct: 33 NDNNDDDDGSNENDDDGSDENDYVGDN--NDYDSGDNNDKDDGSDNNNDDDDNSD 85
>SB_30297| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 385
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 293 NVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
N D + NND+ED +E+ + D DD
Sbjct: 342 NGEDCQNKSGNNDEEDEEEESDDDDDNDD 370
>SB_20991| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 79
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 289 DNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
+N NN + + N+DD+D D+ +++D +DD
Sbjct: 14 NNNNNNNNNNNNNNNDDDDDDDDDDDNNDDDDD 46
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 289 DNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
+N NN + + NNDD+D D+ + ++ +DD
Sbjct: 13 NNNNNNNNNNNNNNNNDDDDDDDDDDDNNDDDD 45
>SB_13856| Best HMM Match : CXC (HMM E-Value=0.021)
Length = 464
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 293 NVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
N D + NND+ED +E+ + D +DD
Sbjct: 298 NGEDCQNKSGNNDEEDNEEESDYDDDDDD 326
>SB_53103| Best HMM Match : DUF1388 (HMM E-Value=0.29)
Length = 462
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 5 QEEKVPTETSNKTHVRDIRNTELVSRLLAATPP 37
QE+K P E NK H + R TE R L PP
Sbjct: 317 QEQKTPKEGKNKNHQKRAR-TENTRRRLEQKPP 348
>SB_51758| Best HMM Match : MNNL (HMM E-Value=1.2)
Length = 326
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 292 NNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
NN + + NNDD+D D+ + D +DD
Sbjct: 116 NNNNNNNNNNNNNDDDDDDDDDDDDDDDDD 145
>SB_51066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 106
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 289 DNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
+N +N D + N+DD+D D+ + D +DD
Sbjct: 10 NNNDNNNDNDNDNDNDDDDDDDDDDDDDDDDDD 42
>SB_27829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 227
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 291 LNNVRDTE-GSKVNNDDEDRDEKLESSDVEDDVID 324
L V D+E G+ ++DD+D D+ + DV+DDV D
Sbjct: 99 LLKVDDSEYGTDDDDDDDDDDDVDDDVDVDDDVDD 133
>SB_15286| Best HMM Match : I-set (HMM E-Value=0.72)
Length = 187
Score = 28.3 bits (60), Expect = 9.0
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 261 TPDKIFNQNKIGKANGTSYVMKNLKRVYDNLNNVRDTEGSKVNNDDEDRDEKLESSD 317
T +FN N N SY K+ + + DT+ S ++NDD D D + +++D
Sbjct: 105 TDGGLFNNNDDENDNDDSYNDKD-EDDDKGSDACADTDQSGIDNDDGDNDNRYDNND 160
>SB_39141| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 289 DNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
+N NN + + N+DD+D D+ + +D +DD
Sbjct: 96 NNNNNNNNNNNNNNNDDDDDDDDDDDDNDDDDD 128
>SB_12884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 289 DNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
+N +N D + N+DD+D D+ + D +DD
Sbjct: 10 NNNDNNNDNDNDNDNDDDDDDDDDDDDDDDDDD 42
>SB_2546| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 294 VRDTEGSKVNNDDEDRDEKLESSDVEDDVID 324
V D + + VN+DD+D + D +DDV+D
Sbjct: 183 VNDDDDNVVNDDDDDVVVDDDVDDADDDVVD 213
>SB_1065| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 28.3 bits (60), Expect = 9.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 288 YDNLNNVRDTEGSKVNNDDEDRDEKLESSDVEDD 321
YD+ + D + N DD+D D K E D +DD
Sbjct: 52 YDDDIDDDDYDNDNDNYDDDDDDHKYEEDDDDDD 85
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.132 0.383
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,987,875
Number of Sequences: 59808
Number of extensions: 385707
Number of successful extensions: 3850
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 3104
Number of HSP's gapped (non-prelim): 595
length of query: 324
length of database: 16,821,457
effective HSP length: 82
effective length of query: 242
effective length of database: 11,917,201
effective search space: 2883962642
effective search space used: 2883962642
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 60 (28.3 bits)
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