Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001403-TA|BGIBMGA001403-PA|undefined
(701 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 37 0.011
SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynei... 35 0.044
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 34 0.058
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 33 0.18
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 31 0.41
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 31 0.54
SPBC13G1.03c |pex14||peroxisomal membrane anchor protein|Schizos... 31 0.72
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 31 0.72
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 31 0.72
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 31 0.72
SPBC365.07c |||TATA element modulatory factor homolog |Schizosac... 30 0.95
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 30 0.95
SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyc... 30 1.3
SPCPJ732.01 |vps5||retromer complex subunit Vps5|Schizosaccharom... 29 1.7
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 29 1.7
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 29 1.7
SPBC577.15c |||NASP family histone binding protein|Schizosacchar... 29 1.7
SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase Sen1|... 29 2.2
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 29 2.2
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 29 2.2
SPAC22G7.09c |nup45||nucleoporin Nup45|Schizosaccharomyces pombe... 29 2.2
SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 2.9
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 29 2.9
SPBC530.06c |||translation initiation factor eIF3 alpha subunit ... 28 3.8
SPBC3B9.15c |scp1||sterol regulatory element binding protein Scp... 28 3.8
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 28 5.1
SPAC20G8.10c ||SPAC3A12.01c|beclin family protein|Schizosaccharo... 27 6.7
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 6.7
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 6.7
SPBC651.09c |||RNA polymerase II associated Paf1 complex |Schizo... 27 8.8
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 27 8.8
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 27 8.8
SPAC3G9.04 |ssu72||phosphoric ester hydrolase |Schizosaccharomyc... 27 8.8
SPAC9E9.14 |vps24||vacuolar sorting protein Vps24|Schizosaccharo... 27 8.8
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 36.7 bits (81), Expect = 0.011
Identities = 26/115 (22%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Query: 525 LKMEDDMNHQLKVKDMRIEELELKIMQLEKQVDVLKNTMKDIEKEAETRYSGLTKDQTAS 584
L+ + +N +V ++EEL+ LEK+ L+ +++ KE +T K Q S
Sbjct: 1337 LRFQSVLNKYERVDPTQLEELKKNCEALEKEKQELETKLQETAKETDT-----FKQQVNS 1391
Query: 585 LIQELRCLEEKLDSAVQSKAFFKEQWGRAVRELHLLKLDTRKQMLSQLQQDRREL 639
L +E+ L+++++ A W L L + +L +EL
Sbjct: 1392 LNEEVENLKKEVEQANTKNTRLAAAWNEKCENLKKSSLTRFAHLKQELTNKNKEL 1446
>SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynein
Mcp5/Num1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 968
Score = 34.7 bits (76), Expect = 0.044
Identities = 31/137 (22%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 534 QLKVKDMRIEELELKIMQLEKQVDVLKNTMKDIEKEAETRYSGLTKDQTASLIQELRCLE 593
QL K+ ++L + L KQ+D+L + MK + KE +T+ G Q L Q L+ L
Sbjct: 143 QLSEKEDLHKKLSVDNAHLIKQLDLLSSNMKTLMKE-KTKVQG----QRDLLEQRLQGLM 197
Query: 594 EKLDSAVQSKAFFKEQWGRAVRELHLLKLDTRKQMLSQLQQDRRELGDAGLDTIIDDNES 653
+KL ++ + EL L++ + L+ + + + + +T++ ++E
Sbjct: 198 KKLTEVESLTVSLNDEKNKLTLELTNLRICLHELQLNAEKGETIDESEDSKNTLVTEDE- 256
Query: 654 KRNQDAMDIKKLKDDFY 670
N D++ ++ D ++
Sbjct: 257 --NDDSVFLESSSDKYF 271
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 34.3 bits (75), Expect = 0.058
Identities = 29/136 (21%), Positives = 73/136 (53%), Gaps = 10/136 (7%)
Query: 515 AKYQELREASLKMEDDMNHQLKVKDM---RIEELELKIMQLEKQVDVLKNTMKDIE---K 568
A Q L+ +ED+++ + K++ R EELE +I +L + +NT+++++ +
Sbjct: 514 AAVQYLQRRLRMVEDELHEAINSKNVQQSRSEELEQQISKLTDNLQEYRNTVRELKLDLE 573
Query: 569 EAETRYSGLTKDQTASLIQELRCLEEKLDSAVQSKAF-FK--EQWGRAVRELHLLKLDTR 625
+++ + L+K + ++E+ L+++L + + F FK +++ + L++ + +
Sbjct: 574 KSKKKNEDLSKLEVEK-VEEIANLKKELTHLAKQQEFGFKYVQEFSNEDLQGKLIEANEK 632
Query: 626 KQMLSQLQQDRRELGD 641
L+QL + ++E D
Sbjct: 633 NYKLTQLLKTQKEDAD 648
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 32.7 bits (71), Expect = 0.18
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 526 KMEDDMNHQLKVKDMRIEELELKIMQLEKQVDVLKNTMKDIEKEAETRYSGLTKDQTASL 585
K+ +N + + E + K ++L++ VD + + + +++ E S LT S+
Sbjct: 461 KVRPFINEVRRSITLEFHEEQNKSLKLQEHVDTVNDLIAELQDELRGIESRLT-----SV 515
Query: 586 IQELRCLEEKLDSAVQSKAFFKEQWGRAVRELHLLKLDTRKQMLSQLQQ 634
+ E L E +A + K F + + REL LKL + ML QL Q
Sbjct: 516 LSECNMLRE---TASEEKNAFDAESDKLERELQQLKLSSHNSML-QLDQ 560
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 31.5 bits (68), Expect = 0.41
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 514 TAKYQELREASLKMEDDMNHQLKVKDMRIEELELKIMQLEKQVDVLKNTMKDIEKEAE-- 571
TA+ QE+REA+ + D + L+ +L QL K+ D +IE E E
Sbjct: 1831 TAQLQEVREANQTLRKDQDTLLRENRNLERKLHEVSEQLNKKFDSSARPFDEIEMEKEVL 1890
Query: 572 TRYSGLTK--DQTASLIQELRCLE 593
T S L + D +SL++ ++ +E
Sbjct: 1891 TLKSNLAQKDDLLSSLVERIKQIE 1914
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 31.1 bits (67), Expect = 0.54
Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 532 NHQLKVKDM-RIEELELKIMQLEKQVDVLKNTMKDIEKEAETRYSGLTKDQTASLIQELR 590
+ +L V D +I+ LE +I + EK+++ ++D + E E R +D +I+E+R
Sbjct: 776 SQELSVLDTEKIQTLERRISETEKELESYAGQLQDAKNE-EHRI----RDNQRPVIEEIR 830
Query: 591 CLEEKLDSAVQSKAFFKEQWGRAVRELHLLKLDTRK 626
EK+ + Q + + + R E ++D +
Sbjct: 831 IYREKIQTETQRLSSLQTELSRLRDEKRNSEVDIER 866
>SPBC13G1.03c |pex14||peroxisomal membrane anchor
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 30.7 bits (66), Expect = 0.72
Identities = 22/112 (19%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 515 AKYQELREASLKMEDDMNHQLKVKDMRIEELELKIMQLEKQVDVLKNTMKDIEKEAETRY 574
AK+ E + +++ + + + +EL++ + LE+ ++ LK T ++ ++E
Sbjct: 115 AKFLEAHKILENLDEQTRKLSERTEKQQDELDIALDDLEETLNTLKRTSENRDREIARIS 174
Query: 575 SGLTKDQTASLIQELRCLEEKLDSAVQSKAFFKEQWGRAVRELHLLKLDTRK 626
+ T +L Q L +++ + A+Q+ + R + L L+ D++K
Sbjct: 175 QDVYTMSTITLPQSLEQIKKSQEEALQNLS-------REISSLRCLQTDSKK 219
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 30.7 bits (66), Expect = 0.72
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 524 SLKMEDDMNHQLKVKDMRIEELELKIMQLEKQVDVLKNTMKDIEKEAETRYSGLTKDQTA 583
SLK+E+ + Q K I E+E + +++V +LK +K IE E R ++ D+T
Sbjct: 243 SLKVEE-LTVQASQKHSHIAEMESSLQTSKQEVLILKEKIKKIEDE-RMRQMSVSSDRT- 299
Query: 584 SLIQELRCLEEKL 596
L +L+ + E +
Sbjct: 300 -LDSQLQTVNENI 311
Score = 28.3 bits (60), Expect = 3.8
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 519 ELREASLKMEDDMNHQLKVKDMRIEELELKIMQLEKQVDVLKNTMKDIEKE 569
E+ E L + ++ +++ K+ ++ IE K L K++D L +MK E E
Sbjct: 854 EIAELELSLVNEEHNRKKLTEL-IEIESAKFSGLNKEIDSLSTSMKTFESE 903
Score = 27.9 bits (59), Expect = 5.1
Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 13/154 (8%)
Query: 522 EASLKMEDDMNHQLKVKDMRIEELELKIMQLEKQVDVLKNTMKDIEKEAETRYSGLTKDQ 581
+A K+E DM K ++ ELE + Q + ++D I +++E Y+G+ K +
Sbjct: 772 QAIKKIERDMQEWKHNKGSKMAELEKEFNQYKHKLD----EFTPILEKSENDYNGV-KLE 826
Query: 582 TASLIQELRCLEEKLDSAVQSKAFFKEQWGRAVRELHLLKLD-TRKQMLSQLQQDRRELG 640
L EL+ ++ L + + K + A EL L+ + RK++ ++ + +
Sbjct: 827 CEQLEGELQNHQQSLVQGESTTSLIKTE--IAELELSLVNEEHNRKKLTELIEIESAKFS 884
Query: 641 DA-----GLDTIIDDNESKRNQDAMDIKKLKDDF 669
L T + ES+ N + I+KL +F
Sbjct: 885 GLNKEIDSLSTSMKTFESEINNGELTIQKLNHEF 918
Score = 27.1 bits (57), Expect = 8.8
Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 525 LKMEDDMNHQLKVKDMRIEELELKIMQLEKQVDVLKNTMKDIEKEAETRYSGLTKDQTAS 584
LK+E +N Q+ + + E + QL +++D+L+N ++ ++ + S +T +
Sbjct: 421 LKLEG-LNKQISLTKPKKAEATKRCDQLNREIDILQNHVEKLKMSLKNTNSDITGEDV-- 477
Query: 585 LIQELRCL 592
L Q+L+ L
Sbjct: 478 LQQKLKQL 485
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 30.7 bits (66), Expect = 0.72
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Query: 535 LKVKDMRIEELELKIMQLEKQVDVLKNTMKDIEKEAETRYSGLTKDQTASL-IQELRCLE 593
L KD + K +LE +V N +K + KE E + ASL EL+ +
Sbjct: 1098 LNDKDQLYQLQATKNKELEAKVKECLNNIKSLTKELENKEEKCQNLSDASLKYIELQEIH 1157
Query: 594 EKLDSAVQSKAFFKEQWGRAVRELHLLK-LDTRKQMLSQLQQD 635
E L V +K+++ +L LK +DT Q LS+ +D
Sbjct: 1158 ENLLLKVSDLENYKKKYEGLQLDLEGLKDVDTNFQELSKKHRD 1200
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 30.7 bits (66), Expect = 0.72
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 8/131 (6%)
Query: 538 KDMRIEELELKIMQLEKQVDVLKNTMKDIEKEAETRYSGLTKDQTASLIQELRCLEEKLD 597
K ++ E KI +L K+ LKN K + + + ++ A LIQ+L +E+KLD
Sbjct: 85 KSYVLKVAEEKIEKLLKENGTLKNEEKCLRMQIVAQ-----EEYVAPLIQKLEIIEKKLD 139
Query: 598 SAVQSKAFFKEQWGRAVRELHLL--KLDTRKQMLSQLQQDRRELGDAGLDTIIDDNESKR 655
+ + + + R E ++L ++D K+ S+L ++ L + DD E +
Sbjct: 140 KSFRKNMEDELRITRLASENNVLISRIDRTKRHFSELFTQKQML-QLQNENFKDDYEKIK 198
Query: 656 NQDAMDIKKLK 666
++ K+ K
Sbjct: 199 EENKRLYKERK 209
>SPBC365.07c |||TATA element modulatory factor homolog
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 30.3 bits (65), Expect = 0.95
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 518 QELREASLKM----EDDMNHQLKVKDMRI--EELELKIMQLEKQVDVLKNTMKDIEKEAE 571
+ L EA K+ E +L+V D + E+LEL+ Q EK++ +L+ +D++++ E
Sbjct: 71 KSLSEAETKLKRLDEKQATPELQVSDSKEMEEQLELQKSQFEKRISILEKEKEDLQRKME 130
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 30.3 bits (65), Expect = 0.95
Identities = 33/147 (22%), Positives = 64/147 (43%), Gaps = 5/147 (3%)
Query: 526 KMEDDMNHQLKVKDMRIEELELKIMQLEKQVDVLKNTMKDIEKEAETRYSGLTKDQTASL 585
+ME++M + + I++ + +L KQ+D +KN I + S L K + SL
Sbjct: 684 QMEEEMQVLREGHESEIKDFIEEHSKLTKQLDDIKNQFGIISSKNRDLLSELEKSK--SL 741
Query: 586 IQELRCLEEKLDSAVQSKAFFKEQWGRAVRELHLLKLDTRKQMLSQLQQDRRELGDAGLD 645
L LE K E+ + + K R+ LS+ + LG+ +
Sbjct: 742 NNSLAALESKNKKLENDLNLLTEKLNKKNADTESFKNTIREAELSK-KALNDNLGNK--E 798
Query: 646 TIIDDNESKRNQDAMDIKKLKDDFYVD 672
II D ++K ++++ +++L+ D
Sbjct: 799 NIISDLKNKLSEESTRLQELQSQLNQD 825
>SPAC1B3.05 |||CCR4-Not complex subunit Not3/5 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 630
Score = 29.9 bits (64), Expect = 1.3
Identities = 28/126 (22%), Positives = 60/126 (47%), Gaps = 7/126 (5%)
Query: 515 AKYQELREASLKMEDDMNHQLKVKDMRIEELELKIMQLEKQVDVLKNTMKDIEKEAETRY 574
A ++++ +E+ + K+++ + E E+KI K+ + + + EKE +
Sbjct: 55 ASSNDIKDKKALLENRRLIEAKMEEFKAVEREMKIKAFSKEGLSIASKLDPKEKEKQD-- 112
Query: 575 SGLTKDQTASLIQELRCLEEKLDSAVQS-KAFFKEQWGRAVRELHLLKLDTRKQMLSQLQ 633
T ++ ++EL E +++ +S KA FK + HL +L++R + +
Sbjct: 113 ---TIQWISNAVEELERQAELIEAEAESLKATFKRGKKDLSKLSHLSELESRIER-HKWH 168
Query: 634 QDRREL 639
QD+ EL
Sbjct: 169 QDKLEL 174
>SPCPJ732.01 |vps5||retromer complex subunit
Vps5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 576
Score = 29.5 bits (63), Expect = 1.7
Identities = 22/93 (23%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 522 EASLKMEDDMNHQLKVKDMRIEELELKIMQLEKQVDVLKNTMKDIEKEAETRYSGLTKD- 580
++S++ QL+ + + + + LE+Q + + D+EKE + L +D
Sbjct: 478 QSSVQAVSRAKTQLEKCKKQAKSQQKSLPYLEEQYEKYRAKAADLEKEFSESTTLLKRDL 537
Query: 581 --QTASLIQELRC-LEEKLDSAVQSKAFFKEQW 610
T S + +L+ +E L+SA++S+ E+W
Sbjct: 538 SSLTTSRVDDLKASVETWLESAIESQKEIIERW 570
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 531 MNHQLKVKDMRIEELELKIMQLEKQVDVLKNTMKDIEKEAETRYSGLTKDQTASLIQELR 590
+ ++L K+ IEEL +I L+ +++ +K+ +D+E E + Q S I++L
Sbjct: 1322 LKNELVSKENLIEELNQEIGHLKSELETVKSKSEDLENE---------RAQNQSKIEQLE 1372
Query: 591 CLEEKLDSAVQSK 603
KL +A ++K
Sbjct: 1373 LKNTKLAAAWRTK 1385
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 29.5 bits (63), Expect = 1.7
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 513 YTAKYQELREASLKMEDD-MNHQLKVKDMRIEELELKIMQLEKQVDVLKNTMKDIEKEAE 571
+ K +L E + E+D ++H D+ +++L+ +I +LE V ++ EKE E
Sbjct: 320 FKEKILDLLEMKQQEENDRISHIEYENDLTVKKLKRRISELEMAVKEYESEKSYSEKEYE 379
Query: 572 TRYSGLTKDQTASLIQELRCLEEKL 596
+ S L + + + E+ L KL
Sbjct: 380 EKISSL-RIELEDKLAEIDMLRNKL 403
>SPBC577.15c |||NASP family histone binding
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 396
Score = 29.5 bits (63), Expect = 1.7
Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 6/102 (5%)
Query: 552 LEKQVDVLKNTMKDIEKE-AETRYSGLTKDQTASLIQELRCLEEKLDSAVQSKAFFKEQW 610
+EK ++LKN + + E E + + G K + ++L +L L E L S ++ K +
Sbjct: 270 VEKAAEILKNVLNERENEVTDKKGKGKQKAEESTLTSDLENLREML-SELEQKTLDLKHG 328
Query: 611 GRAVRELHLLKLDTRKQMLSQLQQDRRELGDAGLDTIIDDNE 652
++ E + K+ S L +D L A + + + N+
Sbjct: 329 APSLEEAVMSKMHES----SLLSKDSSSLAQAVAEAVKNAND 366
>SPAC6G9.10c |sen1||ATP-dependent 5' to 3' DNA/RNA helicase
Sen1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1687
Score = 29.1 bits (62), Expect = 2.2
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 16/100 (16%)
Query: 548 KIMQLEKQVDVLKNTMKDIEKEAETRYSGLTKDQTASLIQELRCLEEKLDSAVQSKAFFK 607
KI +LEKQ+DV ++ +D T+ G + + I E E+K++ +QS++F K
Sbjct: 1282 KIEELEKQIDVARDVAED------TKSLG---KELQNKINEKNLAEQKVEE-LQSQSFTK 1331
Query: 608 EQWGRAVRELHLLKLDTRKQMLSQLQQDRRELGDAGLDTI 647
+E+ LL+ +K +L Q L +G D +
Sbjct: 1332 N------KEVDLLRKKAQKAILKQADVVCATLSGSGHDLV 1365
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 29.1 bits (62), Expect = 2.2
Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 16/157 (10%)
Query: 519 ELREASLKMEDDMNHQLKVKDMRIEELELKIMQLEKQVDVLKNTMKDIE---KEAETRYS 575
+LRE + + ++ K KD I ELE +I E V L T+ + K+ E Y+
Sbjct: 524 DLREENEGLTLKIDSITKEKDRLINELEQRIKSYEVNVSELNGTIDEYRNKLKDKEETYN 583
Query: 576 GLT-----KDQTA----SLIQELRCLEEKLDSAVQSKAFFKEQWGRAVRELHLLKLDTRK 626
+ KD I +L+ E++L S ++ K ++RE + R+
Sbjct: 584 EVMNAFQYKDNDLRRFHESINKLQDREKELTSNLEKKNLVIS----SLRETVAMLEKERE 639
Query: 627 QMLSQLQQDRRELGDAGLDTIIDDNESKRNQDAMDIK 663
+ L + ++L + L I++D S + D+K
Sbjct: 640 SIKKYLSGNAKDLDNTNLMEILNDKISVLQRQLTDVK 676
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/67 (20%), Positives = 37/67 (55%)
Query: 518 QELREASLKMEDDMNHQLKVKDMRIEELELKIMQLEKQVDVLKNTMKDIEKEAETRYSGL 577
+E S +ME+D +++ + I +L+ ++ +L +++DV ++ + + E E T +
Sbjct: 263 REKDSLSTEMEEDKSNKEVDYEYEIRQLQNRLDELSEELDVAQDLLTEKEDEIATLKRQI 322
Query: 578 TKDQTAS 584
+ + +S
Sbjct: 323 EEKENSS 329
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 29.1 bits (62), Expect = 2.2
Identities = 17/80 (21%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 516 KYQELREASLKMEDDMNHQLKVKDMRIEELELKIMQLEKQVDVLKNTMKDIEKEAETRYS 575
+ +EL S +DD+ + ++ R+ + KI++ E + L+N + + S
Sbjct: 351 RMRELETQSFADDDDLQQSIAMQ-RRLAQKRAKILKPEDVAEQLQNAEEVTDMTDSDTAS 409
Query: 576 GLTKDQTASLIQELRCLEEK 595
GL D T + + ++ E +
Sbjct: 410 GLIFDDTRAFVNSIKETENR 429
>SPAC22G7.09c |nup45||nucleoporin Nup45|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 425
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/67 (20%), Positives = 34/67 (50%)
Query: 514 TAKYQELREASLKMEDDMNHQLKVKDMRIEELELKIMQLEKQVDVLKNTMKDIEKEAETR 573
T +Y L + K DD++ ++ + EEL+ K+ + + V+ + N + ++++ +
Sbjct: 232 TTRYSSLNANTQKFLDDLDKEIFSQIQLAEELQTKLGTVSELVESVPNDVAEVQRRLSSV 291
Query: 574 YSGLTKD 580
+ L D
Sbjct: 292 STALLID 298
>SPBC1A4.05 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 700
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/73 (17%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 531 MNHQLKVKDMRIEELELKIMQLEKQVDVLKNTMKDIEKEAETRYSGLTKDQTASLIQELR 590
+ Q+K K + ++E+E ++++LE+++++L+ + + + + ++S +
Sbjct: 541 LTDQVKTKQLALQEIESRVIRLEERLNMLQKLSMQPAISSSSEFVPIESHPSSSAVVP-- 598
Query: 591 CLEEKLDSAVQSK 603
+EE +S ++ K
Sbjct: 599 -IEEPKNSIIEKK 610
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 28.7 bits (61), Expect = 2.9
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 10/79 (12%)
Query: 525 LKME-DDMNHQLKVKDMRIEELELKIMQLEKQVDVLKNTMKDIEKEAETRYSGLTKDQTA 583
LK E D+M ++LK K R +E+E+ LE Q D + + +I E R LT D+
Sbjct: 416 LKTEYDEMENELKAKLSRKKEIEI---SLESQGDRMSQLLANITSINE-RKENLT-DKRK 470
Query: 584 SLIQELRCLEEKLDSAVQS 602
SL +E E KL S++++
Sbjct: 471 SLWRE----EAKLKSSIEN 485
>SPBC530.06c |||translation initiation factor eIF3 alpha subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 396 LEDWKEKQQELHKLQASSVADRACAHRGTIRAFED 430
L DW E+ Q ++ V DR R T++ +D
Sbjct: 340 LRDWNEEIQSTREMDHEDVQDRVLRERLTVKTLQD 374
>SPBC3B9.15c |scp1||sterol regulatory element binding protein
Scp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1086
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 141 FAECPHVVARVCHGDTDLGICSLDLRKLIPTEDIKHFIDNFCNTDNA 187
F C VV+ + HG L + S+D+R+L +++ F+D+ + N+
Sbjct: 369 FLACSFVVSFLLHGSFFLAVLSVDIRRL----ELQDFLDSNSSNRNS 411
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 27.9 bits (59), Expect = 5.1
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 342 RQAEREPVVLETSKSDTCITSPKRAARKDNHTDLVKMALSEADRDSIMRRF-------VD 394
++ +EP V T+ S + + P + +DNH + + ++ + + F V
Sbjct: 445 QKPSKEPEVKPTTPSASKVEEPSKKRDEDNHQKEETVTQPKREKTPVEKSFPKPASSPVT 504
Query: 395 ELEDWKEKQQELHKLQASSVADRA 418
ED K++ E KL+ S A +A
Sbjct: 505 FSEDVKKEPSEEKKLEVSDEAPKA 528
>SPAC20G8.10c ||SPAC3A12.01c|beclin family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 464
Score = 27.5 bits (58), Expect = 6.7
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 519 ELREASLKME-DDMNHQLKVKDMRIEELELKIMQLEKQVDVLKNTMKDIEKEAETRYSGL 577
E A+L E D++ Q+ K+ +IEE+ + +L+K + L + + E + Y+ L
Sbjct: 182 EENTAALDSEIDELMKQINEKEEKIEEISDETDKLQKLLRELDEEKEKVYAEEQEFYNNL 241
Query: 578 TKDQTASLIQE 588
+ Q L E
Sbjct: 242 NQFQIKKLSLE 252
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 27.5 bits (58), Expect = 6.7
Identities = 21/95 (22%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 516 KYQELREASLKMEDDMNHQLKVKDMRIEELELKIMQLEKQVDV----LKNTMKDIEKEAE 571
+Y+ELR LK + ++ +++ EE+E + + + LK++M + E E
Sbjct: 189 EYEELRNECLKHDPQLDAEIRTLQDTFEEVERTLTKQVSDAKIADKPLKDSMFNSNSEKE 248
Query: 572 TRYSGLTK-DQTASLIQE-LRCLEEKLDSAVQSKA 604
L K ++ A + E ++ E+L+S+++ +
Sbjct: 249 KIMHALEKAEKDADIYSEFIQQYMEQLESSLEKSS 283
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 27.5 bits (58), Expect = 6.7
Identities = 31/135 (22%), Positives = 55/135 (40%), Gaps = 9/135 (6%)
Query: 529 DDMNHQLKVKDMRIEELELKIMQLEKQVDVLKNTMKDIEKEAETRYSGLTKDQTASLIQE 588
DD+ +L V E L L Q K ++ N +K IEK + KDQ ++E
Sbjct: 1042 DDLQSKLSVVSSEYENLLLISSQTNKSLEDKTNQLKYIEKNVQKLLD--EKDQRNVELEE 1099
Query: 589 LRCLEEKL---DSAVQSKAFFKEQWGRAVRELHLLKLDTRKQMLSQLQQDRRELGDAGLD 645
L KL ++ ++ + + + +L +D K+ L+Q E +
Sbjct: 1100 LTSKYGKLGEENAQIKDELLALRKKSKKQHDLCANFVDDLKEKSDALEQLTNEKN----E 1155
Query: 646 TIIDDNESKRNQDAM 660
I+ +S N +A+
Sbjct: 1156 LIVSLEQSNSNNEAL 1170
>SPBC651.09c |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 560
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 29 NEYILESKKSVSSPDLQPKLLCDEGLI 55
+E ++ + + SSPDL PKLL E I
Sbjct: 490 SESVVVASEKASSPDLSPKLLPSESQI 516
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 27.1 bits (57), Expect = 8.8
Identities = 32/167 (19%), Positives = 65/167 (38%), Gaps = 18/167 (10%)
Query: 520 LREASLKMEDDMNHQLKVKDMRIEELELKIMQLEKQVDVLKNTMKDIEKEAETRYSGL-- 577
L++ + + + LK+ D + E++ IM+ E N + ++E +YS
Sbjct: 243 LQDQQNGLMESRSQSLKILDSNVNEMDKLIMERE-------NALNNVETTNLKKYSSFLA 295
Query: 578 TKDQTASLIQELRCLEEKLDSAVQSKAFFKEQ---WGRAVRELHLLKLDTRKQMLSQLQQ 634
K+ + ++LR LE L +Q + + ++ +S +Q
Sbjct: 296 LKEAVSMTSEQLRVLEHLLSECSHEINVLSQQSKNFNGVFESSYQPLINDLDHQISVMQN 355
Query: 635 DRRELGDAGLDTIIDDNESKRNQDAMDIKKLKDDFYVDILASTPALE 681
D + + +A + S + ++ KK K+ Y D L LE
Sbjct: 356 DEKRINNAKTEL------SLSLEKKLEAKKQKEKVYKDKLDELANLE 396
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/57 (22%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 514 TAKYQELREASLKMEDDMNHQLKVKDMRIEELELKIMQL-EKQVDVLKNTMKDIEKE 569
+ K Q+ ++ K+E+D+ + + +EE E +++QL E + D ++N ++ ++ +
Sbjct: 154 STKIQKAKKEESKLEEDLRNARAKYEESLEEFEDRMVQLKELEPDRVENVVRLLQMQ 210
>SPAC3G9.04 |ssu72||phosphoric ester hydrolase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 197
Score = 27.1 bits (57), Expect = 8.8
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 188 LTIQERCYILRCDETTKRKDDGRRPFVDIEMSLK 221
+T +ERCY C++ +R + RP I + +K
Sbjct: 110 ITCEERCYDAICEDLYRRGETLNRPVYLINVDIK 143
>SPAC9E9.14 |vps24||vacuolar sorting protein
Vps24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 231
Score = 27.1 bits (57), Expect = 8.8
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 518 QELR-EASLKMEDDMN-HQLKVKDMRIEELELKIMQL----EKQVDVLKNTMKDIEKEAE 571
+E+R E L +EDD L +D ++E+ K + EK D + + +++
Sbjct: 142 EEMRDEMFLPVEDDEELMDLADEDEEVQEILTKYNVIPAPSEKAADAATHREQSLKQALP 201
Query: 572 TRYSGLTKDQTASLIQELRCLEEKLDS 598
+ +G+ KD T ++L + +KLD+
Sbjct: 202 SLSNGIAKDSTEIDEEQLLDIRDKLDA 228
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.133 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,735,434
Number of Sequences: 5004
Number of extensions: 105512
Number of successful extensions: 445
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 407
Number of HSP's gapped (non-prelim): 61
length of query: 701
length of database: 2,362,478
effective HSP length: 78
effective length of query: 623
effective length of database: 1,972,166
effective search space: 1228659418
effective search space used: 1228659418
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)
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