Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001403-TA|BGIBMGA001403-PA|undefined
(701 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 34 0.015
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 33 0.026
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 28 0.96
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 27 2.2
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 26 2.9
CR954256-5|CAJ14146.1| 615|Anopheles gambiae predicted protein ... 25 5.1
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 25 5.1
AF042732-3|AAC18058.1| 496|Anopheles gambiae diphenol oxidase-A... 25 5.1
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 25 6.8
U50469-1|AAA93473.1| 160|Anopheles gambiae protein ( Anopheles ... 25 9.0
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 33.9 bits (74), Expect = 0.015
Identities = 23/116 (19%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Query: 516 KYQELREASLKMEDDMNH-QLKVKDMRIEELELKIMQLEKQVDVLKNTMKDIEKEAETRY 574
++ +L+E + ++N+ + ++ ++ + +I +L K+++ L+ T+ + +E +T+
Sbjct: 709 RFGQLKEQHDMLNYELNNLKQRLAQTSFQQTKEEIEELNKKIETLQKTIVEA-RETQTQC 767
Query: 575 SGLTKDQTASLI-------QELRCLEEKLDSAVQSKAFFKEQWGRAVRELHLLKLD 623
S KD A + +EL+ EE L + + ++ W + ++ LKL+
Sbjct: 768 SAKVKDLQAKIADGKGHRERELKSAEEDLKRSKKKSEESRKNWKKHEQDFETLKLE 823
Score = 25.0 bits (52), Expect = 6.8
Identities = 16/83 (19%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 522 EASLKMEDDMNHQLKVKDMRIEELELKIMQLEKQVDVLKNTMKDIEKE-AETRYSGLTKD 580
+A L+ ++ + + +IE+ + QL++Q D+L + ++++ A+T + TK+
Sbjct: 683 QAMLQEKEAELRDISAEVSKIEKTAHRFGQLKEQHDMLNYELNNLKQRLAQTSFQ-QTKE 741
Query: 581 QTASLIQELRCLEEKLDSAVQSK 603
+ L +++ L++ + A +++
Sbjct: 742 EIEELNKKIETLQKTIVEARETQ 764
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 33.1 bits (72), Expect = 0.026
Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 13/162 (8%)
Query: 518 QELREASLKMEDDMNHQLKVKDMRIEELELKIMQLEKQVDVLKNTMKDIEKEAETRYSGL 577
+ L AS ED + +D EE ++K+ + KNT +D+ EA+ L
Sbjct: 1424 EALYAASRNAEDARKNAQTAQDKYAEEASKLAENIKKRANATKNTARDLHHEADQLNGRL 1483
Query: 578 TK------DQTASLIQELRC---LEEKLDSAVQSKAFFKEQWGRAVRELHLLK---LDTR 625
K ++ A + ++L +EK+ A + K Q +A+RE+ L+ + R
Sbjct: 1484 AKTDNRLEEREAQIRKDLNLTNEAKEKVGQAQLNSNEAKSQVDKAMREVSLIMSELANLR 1543
Query: 626 KQMLSQLQQDRRELGDAGLDTIIDDNESKRNQDAMDIKKLKD 667
+ ++ L R L A + + D +KR ++ K +++
Sbjct: 1544 EIDVNSLDDLERRLSAAEKE-LEDAQLTKRLSSLVEAKNIQN 1584
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 27.9 bits (59), Expect = 0.96
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 530 DMNHQLKVKDMRIEEL--ELKIMQLEKQVDVLKNTMKDIEKEAETRYSG 576
+MN LK+ M++ +L EL + + E Q ++KN +E+E ET G
Sbjct: 137 EMNESLKLLAMQVAQLSKELSLCRKELQESLMKNAA--LERELETYRMG 183
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 26.6 bits (56), Expect = 2.2
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 541 RIEELELKIMQLEKQVDVLKNTMKDIEKEAETRYSGLTKDQTASLIQELRCLEEKLDSAV 600
R +EL I +++VD++ NTM ++ E ++ Q+ + E + E+ +SA
Sbjct: 454 RNDELASMIASAQREVDLMYNTMAHVKDAREEKHHERCAKQSETTRIEKQL--EQFESAP 511
Query: 601 QSK 603
+SK
Sbjct: 512 RSK 514
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 26.2 bits (55), Expect = 2.9
Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Query: 516 KYQELREASLKMEDDMNHQLKVKDMRIEELELKIMQLEKQVDVLKNTMKDIEKEAETRYS 575
K ++ E K+E + N LK ++ I+ ++ + LE+Q + +D+
Sbjct: 423 KKAQIEENYKKIESEKNEALKRQEKLIDHIKTSRLGLEEQKRIKAELSQDV--------- 473
Query: 576 GLTKDQTASLIQELRCLEEKLDSA 599
G +K++ L EL + E+L A
Sbjct: 474 GTSKERIHELQSELDNVREQLGDA 497
Score = 25.0 bits (52), Expect = 6.8
Identities = 20/90 (22%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 517 YQELREASLKMEDDMNHQ--LKVKDMRIEELELKIMQLEKQVDVLKNTMKDIEKEAETRY 574
Y +EA ED ++ Q L + + R EE + + + +K+V + M E+E
Sbjct: 239 YHNEKEAKRLKEDQISKQQELNIIEKRKEEADEVLKEKKKEVGKMTREMAKKEQEIREVE 298
Query: 575 SGLTKDQTASL--IQELRCLEEKLDSAVQS 602
+ ++K + +++ ++KLD A+++
Sbjct: 299 AEMSKRHPMFIKAKEKVAHTQKKLDGALKT 328
>CR954256-5|CAJ14146.1| 615|Anopheles gambiae predicted protein
protein.
Length = 615
Score = 25.4 bits (53), Expect = 5.1
Identities = 12/52 (23%), Positives = 26/52 (50%)
Query: 344 AEREPVVLETSKSDTCITSPKRAARKDNHTDLVKMALSEADRDSIMRRFVDE 395
A R P++ + K + + +P R A DN + ++A RD + ++ + +
Sbjct: 34 AVRRPLLSDAEKLEQRLLAPNRNADFDNESSEETQPPNDAGRDRLQQQLLQK 85
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 25.4 bits (53), Expect = 5.1
Identities = 23/101 (22%), Positives = 52/101 (51%), Gaps = 3/101 (2%)
Query: 519 ELREASLKMEDDMNHQLKVKDMRIEELELKIMQLEKQVDVLKNTMKDIEKEAETRYSGLT 578
EL+ + +++D ++HQ K++D +++ K +LEK++ + + + + +
Sbjct: 398 ELKSLNKQIKDKISHQNKLQDDLKKDI-AKQGELEKKIQEHTESFEQLRVQIDEHNKNFY 456
Query: 579 K-DQTASLIQELRCLEEKLDSAV-QSKAFFKEQWGRAVREL 617
+ + Q LR K ++AV Q+ + +KE+ RA + L
Sbjct: 457 ELKKKKDHYQSLRNDIWKKETAVTQTLSGYKEELARADQAL 497
>AF042732-3|AAC18058.1| 496|Anopheles gambiae diphenol oxidase-A2
protein.
Length = 496
Score = 25.4 bits (53), Expect = 5.1
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 565 DIEKEAETRYSGLTKDQTASLIQELRCLEEKLDSAVQSK 603
D+E E+ KD +QE+R ++D AV SK
Sbjct: 17 DVEMESAEDAEAAKKDAELLAVQEIRDHARQIDKAVVSK 55
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 25.0 bits (52), Expect = 6.8
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 547 LKIMQLEKQVDVLKNTMKDIEKEAETRYSGLTKDQTASLIQE 588
L+ Q++KQ LK T+++ + A+ R SG D I+E
Sbjct: 3193 LEHSQIDKQFHDLKQTVQEYRQLADNRNSGNWLDNIFKDIEE 3234
>U50469-1|AAA93473.1| 160|Anopheles gambiae protein ( Anopheles
gambiae putativecuticle protein mRNA, partial cds. ).
Length = 160
Score = 24.6 bits (51), Expect = 9.0
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 342 RQAEREPVVLETSKSDTCITSPKRAARKDNHTDLVKMALSEADRDSIMRRFVDELED 398
R REP VL + +T ++ ++ D+V+ + S D D +R VD D
Sbjct: 15 RGVRREPAVLVLVRHLGALTGDSKSQQESRDGDVVQGSYSVVDPDG-TKRTVDYTAD 70
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.318 0.133 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 603,529
Number of Sequences: 2123
Number of extensions: 22007
Number of successful extensions: 99
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 87
Number of HSP's gapped (non-prelim): 14
length of query: 701
length of database: 516,269
effective HSP length: 69
effective length of query: 632
effective length of database: 369,782
effective search space: 233702224
effective search space used: 233702224
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 51 (24.6 bits)
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