GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001402-TA|BGIBMGA001402-PA|IPR002086|Aldehyde
dehydrogenase
         (362 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    25   3.3  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   10.0 

>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 25.0 bits (52), Expect = 3.3
 Identities = 9/18 (50%), Positives = 14/18 (77%)

Query: 51  YGDTGAAIVDHPDVDKVA 68
           YGDTGA   +H D++++A
Sbjct: 322 YGDTGAHCGNHQDLNEIA 339


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.4 bits (48), Expect = 10.0
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 270 LKFSQFDEVVERANNSEYGLAAAVFTKDLDK 300
           LK+S  D    + N +EY      FT++LD+
Sbjct: 725 LKYSMNDLETSKKNINEYDRQLEDFTRELDQ 755


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.137    0.414 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 344,246
Number of Sequences: 2123
Number of extensions: 13799
Number of successful extensions: 27
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 25
Number of HSP's gapped (non-prelim): 2
length of query: 362
length of database: 516,269
effective HSP length: 65
effective length of query: 297
effective length of database: 378,274
effective search space: 112347378
effective search space used: 112347378
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 48 (23.4 bits)