Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001401-TA|BGIBMGA001401-PA|IPR003000|Silent information
regulator protein Sir2
(370 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11507| Best HMM Match : SIR2 (HMM E-Value=3.4e-11) 206 2e-53
SB_42699| Best HMM Match : SIR2 (HMM E-Value=1.6e-12) 96 5e-20
SB_39846| Best HMM Match : SIR2 (HMM E-Value=1.4013e-45) 53 4e-07
SB_13626| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 3e-05
SB_52117| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 7e-05
SB_17507| Best HMM Match : SIR2 (HMM E-Value=0.00019) 45 9e-05
SB_43176| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 9e-05
SB_8770| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_52909| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.0
SB_41513| Best HMM Match : RVT_1 (HMM E-Value=8.9e-21) 31 2.0
SB_55351| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.0
SB_907| Best HMM Match : RVT_1 (HMM E-Value=1.3e-27) 30 3.5
SB_23337| Best HMM Match : Ank (HMM E-Value=5.1e-07) 29 4.6
SB_3382| Best HMM Match : WD40 (HMM E-Value=2.8e-05) 29 6.1
SB_52409| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_47950| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_57640| Best HMM Match : DUF632 (HMM E-Value=2.8) 29 8.0
SB_45941| Best HMM Match : DUF632 (HMM E-Value=2.8) 29 8.0
SB_13176| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.0
>SB_11507| Best HMM Match : SIR2 (HMM E-Value=3.4e-11)
Length = 813
Score = 206 bits (504), Expect = 2e-53
Identities = 96/181 (53%), Positives = 127/181 (70%), Gaps = 1/181 (0%)
Query: 24 FDSNDKLNQKCVLLAQLVKDSKHIVVHTGAGISTSAGIPDFRGPNGVWTLEKEGKKPTIN 83
FDS +L K LA++++ +K +VVHTGAG+ST+AGIPDFRGP GVWTLE++G P I+
Sbjct: 164 FDSESELASKVSHLAEMIRAAKRVVVHTGAGVSTAAGIPDFRGPKGVWTLEEKGITPKID 223
Query: 84 VSFADAQPTKTHMXXXXXXXXXXXXXXVSQNIDGLHLKSGVPRKFLAELHGNMFIDECNI 143
VSF A PT THM +SQN+DGLHLKSG PR L+ELHGNMF+++C+
Sbjct: 224 VSFDSAAPTLTHMAIVKLQEEGLVHYVISQNVDGLHLKSGYPRSKLSELHGNMFVEKCDK 283
Query: 144 CKRQFVRSSPVETVGKKCSGVPCAAHHVTGRPCRGRLYDGVLDWEHSLPENDLLMAEWHS 203
C +++VR++ V +VG+K SG C G CRG+L D +LDWEH+LP NDL+ AE +S
Sbjct: 284 CNKEYVRTTAVASVGQKRSGRACTQTRQRG-SCRGKLCDTILDWEHNLPYNDLVNAEKNS 342
Query: 204 S 204
S
Sbjct: 343 S 343
>SB_42699| Best HMM Match : SIR2 (HMM E-Value=1.6e-12)
Length = 501
Score = 95.9 bits (228), Expect = 5e-20
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 17/208 (8%)
Query: 22 EKFDSNDKLNQKCVLLAQLVKDSKHIVVHTGAGISTSAG-----IPDFRGPNGVWTLEKE 76
E D + L K L ++++K + ++TGAGIST + F GPNG+WT +
Sbjct: 74 EVLDPEEILEDKVCQLVGAIREAKTLAIYTGAGISTVKFRLIYCLRFFSGPNGIWTRLAK 133
Query: 77 GKKPTINVSFADAQPTKTHMXXXXXXXXXXXXXXVSQNIDGLHLKSGVPRKFLAELHGNM 136
G++ + + DA+PT +HM VSQN DGLH++SG+P + L+E+HGNM
Sbjct: 134 GERLG-SYNLCDAEPTLSHMSITKLYQEGLVRHVVSQNCDGLHIRSGLPSQALSEVHGNM 192
Query: 137 FIDECNICKRQFVRSSPVETVGKKCSGVPCAAHHVTGR---PCRGRLYDGVLDW-EHSLP 192
F + C C+ + + + H TGR C L D ++ + E
Sbjct: 193 FTEVCTECEDDRIYYRLFDVTER-----TAVRRHQTGRFCTDCGSPLRDTIVHFGEKGCL 247
Query: 193 ENDL-LMAEWH-SSIADLSICLGTTLQI 218
E L A + + IAD +CLG++L++
Sbjct: 248 EQPLNWQAAFDVAKIADCILCLGSSLKV 275
>SB_39846| Best HMM Match : SIR2 (HMM E-Value=1.4013e-45)
Length = 427
Score = 52.8 bits (121), Expect = 4e-07
Identities = 73/290 (25%), Positives = 118/290 (40%), Gaps = 46/290 (15%)
Query: 20 VPEKFDSNDKLNQKCVLLAQLVKDSKHIVVHTGAGISTSAGIPDFRGP-NGVWTLEKEG- 77
VPE S +L+ L + + ++ I V TGAGIST +GI D+R G++ + +
Sbjct: 140 VPEFHTSKQELSYITSRLDEFIAENPKIFVITGAGISTESGIRDYRSEGKGLYAITNDRP 199
Query: 78 -------KKPTIN-----------VSFADAQPTKTHMXXXXXXXXXXXXXXVSQNIDGLH 119
K + F QP + H V+QN+D LH
Sbjct: 200 MEYQVFLKSAVMRQRYWARNYVGWPEFGSRQPNEAHYALAKLETLGSVHSLVTQNVDALH 259
Query: 120 LKSGVPRKFLAELHG---NMFIDECN-ICKRQFVRSSPVE------TVGKKCSGVPCAAH 169
K+G K + ELHG + CN I R ++ +E VG+ P
Sbjct: 260 TKAG--SKNVIELHGCSHRVICLGCNQITARTALQKRMIEFNPDWHAVGQ--GQAPDGDT 315
Query: 170 HVTGR--------PCR---GRLYDGVLDWEHSLPENDLLMAEWHSSIADLSICLGTTLQI 218
+T PC+ G L V+ + S+P+ + +A + +D +G+T+++
Sbjct: 316 FLTSEAVKDFKVPPCKACGGILKPEVVFFGDSVPKQIVNIAYDRLAESDALWIIGSTVEV 375
Query: 219 VPSGNLPLETIKYGGKLVICNLQPTKHDNKADLLINYYVDDVLEKVMDIL 268
S E K G + I N+ T+ D A L ++ VL K +D+L
Sbjct: 376 YSSYRFATEASKQGKPIAILNIGKTRADKLASLKVSGVCGTVLPK-LDLL 424
>SB_13626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 155
Score = 46.8 bits (106), Expect = 3e-05
Identities = 20/33 (60%), Positives = 26/33 (78%)
Query: 243 TKHDNKADLLINYYVDDVLEKVMDILGIEIPSY 275
T D KADL INYYVDDV++++M+ L +EIP Y
Sbjct: 16 TVEDKKADLKINYYVDDVMKQLMENLELEIPQY 48
>SB_52117| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 545
Score = 45.6 bits (103), Expect = 7e-05
Identities = 37/126 (29%), Positives = 49/126 (38%), Gaps = 22/126 (17%)
Query: 45 KHIVVHTGAGISTSAGIPDFRGP-NGVWTLEKEGKKPTINVSF----------------- 86
K+I+V GAGIST +GIPDFR P G++ +E P F
Sbjct: 111 KNIIVMAGAGISTPSGIPDFRTPGTGLYDNLQEYNIPEPTAIFDIEYFWYDPRPFFCLAK 170
Query: 87 ----ADAQPTKTHMXXXXXXXXXXXXXXVSQNIDGLHLKSGVPRKFLAELHGNMFIDECN 142
+ QP H +QNIDGL +G+P + L E HG C
Sbjct: 171 TLYPGNYQPNYVHYFVKLLHDKGFLLRMYTQNIDGLERLAGLPAEKLVEAHGTFSTASCI 230
Query: 143 ICKRQF 148
C +
Sbjct: 231 SCHHSY 236
>SB_17507| Best HMM Match : SIR2 (HMM E-Value=0.00019)
Length = 202
Score = 45.2 bits (102), Expect = 9e-05
Identities = 19/23 (82%), Positives = 21/23 (91%)
Query: 45 KHIVVHTGAGISTSAGIPDFRGP 67
KHI+V TGAGIST+AGIPDFR P
Sbjct: 121 KHIIVMTGAGISTAAGIPDFRSP 143
>SB_43176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 45.2 bits (102), Expect = 9e-05
Identities = 18/35 (51%), Positives = 27/35 (77%)
Query: 37 LAQLVKDSKHIVVHTGAGISTSAGIPDFRGPNGVW 71
+ +L+K K+I+V TGAG+S S GIPDFR +G++
Sbjct: 111 VVRLIKKCKNIIVLTGAGVSVSCGIPDFRSRDGIY 145
>SB_8770| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1303
Score = 31.1 bits (67), Expect = 1.5
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
Query: 10 SPYENKGILGVPEKFDSNDKLNQKCVLLAQLVK-DSKHIVVHTGAGISTSAGIPDFRGPN 68
+P GI VP + + KL +K + K + K ++ AG+ + PDF
Sbjct: 143 NPDRPAGIPVVPVYDEDDAKLKRKVQRITSPEKWELKQLIA---AGVLDKSDYPDFDEDT 199
Query: 69 GVWTLEKEGKKPTINVSFADAQP 91
G+ E +G + + AD +P
Sbjct: 200 GILPKEDDGSDEDVEIEMADEEP 222
>SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 31.1 bits (67), Expect = 1.5
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 303 EKTFKSKCKGVKKKRILIKTKRFTSNANDIEKSKMIKLEVKEENETKDWPLKPSDQEFII 362
+K + K K KKK+ K K+ N N +K K +K + +EE E + L+ ++E I
Sbjct: 20 KKKKQKKKKKKKKKKKKKKNKKNKKNKNKNKKKKKMKKKKEEEAEVGEKTLEAENEEEKI 79
Query: 363 DQ 364
++
Sbjct: 80 EE 81
>SB_52909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 55
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/45 (33%), Positives = 20/45 (44%)
Query: 140 ECNICKRQFVRSSPVETVGKKCSGVPCAAHHVTGRPCRGRLYDGV 184
+C K + V+ V+ G KC GV C G C G +GV
Sbjct: 7 KCECVKCECVKCEGVKCEGVKCEGVKCEGVKCEGVKCEGVKCEGV 51
>SB_41513| Best HMM Match : RVT_1 (HMM E-Value=8.9e-21)
Length = 1080
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 140 ECNICKRQFVRSSP--VETVGKKCSGVPCAAHHVTGRPCRG 178
EC C+R+ RSS + +GKKC+ H + CRG
Sbjct: 1016 ECYRCRRKAHRSSDKVCKALGKKCNNCGVVRHFAKSKFCRG 1056
>SB_55351| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 140 ECNICKRQFVRSSP--VETVGKKCSGVPCAAHHVTGRPCRG 178
EC C+R+ RSS + +GKKC+ H + CRG
Sbjct: 273 ECYRCRRKAHRSSDKVCKALGKKCNNCGVVRHFAKSKFCRG 313
>SB_907| Best HMM Match : RVT_1 (HMM E-Value=1.3e-27)
Length = 681
Score = 29.9 bits (64), Expect = 3.5
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 260 VLEKVMDILGIEIPSYNESENPMKFAETAIIDWSIDRKDVLALEKTFKSKCKGVKKKRI 318
+L K D + + IP + S + I DWS + + L L KT++ +G KK I
Sbjct: 615 LLVKYADDITLSIPQRHNSADLSSVEVQNIKDWSKENRMTLNLSKTWEMVVRGRTKKPI 673
>SB_23337| Best HMM Match : Ank (HMM E-Value=5.1e-07)
Length = 213
Score = 29.5 bits (63), Expect = 4.6
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 1 MSCNYAEGLSPYENKGILGVPEKFDSNDKL--NQKCVLLAQLVKDSKHIVVHTGAGISTS 58
MS + + + +EN I + EK+DS++K+ K +L + V H+ V
Sbjct: 83 MSYDRLDAVDAFENDSISSMDEKYDSDEKVVRGSKPQILNKAVLSGDHVTVTKFLDRKVD 142
Query: 59 AGIP 62
A +P
Sbjct: 143 ANLP 146
>SB_3382| Best HMM Match : WD40 (HMM E-Value=2.8e-05)
Length = 375
Score = 29.1 bits (62), Expect = 6.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 340 LEVKEENETKDWPLKPSDQEFIIDQ 364
L+ EE+E +DW +KPSD I Q
Sbjct: 137 LQPDEEDEKQDWEIKPSDNLVITGQ 161
>SB_52409| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 29.1 bits (62), Expect = 6.1
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 113 QNIDGLHLKSGVPRKFLAELHGNMFIDECNICKRQF 148
+NID L +G+ L E HG+ C C +++
Sbjct: 299 ENIDTLERVAGITGDHLMEAHGSFHTGHCMACNKEY 334
>SB_47950| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 296
Score = 29.1 bits (62), Expect = 6.1
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 299 VLALEKTFKSKCKG--VKKKRILIKTKRFTSNANDIEKSKMIKLEVKEENETKDWPLKPS 356
V A E+T ++K KG K+KR + + A+D K+K K++ K++ E + L+ S
Sbjct: 186 VKAKEQTSRTKRKGKKEKRKRKTEVIEISDNEASDTGKAKETKIKKKKDKERVESILEIS 245
Query: 357 DQE 359
D E
Sbjct: 246 DSE 248
>SB_57640| Best HMM Match : DUF632 (HMM E-Value=2.8)
Length = 560
Score = 28.7 bits (61), Expect = 8.0
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 180 LYDGVLDWEHSLPENDLLMAEWHSSIADLSICLGTTLQIVPSGNLPLETI 229
L+D LD SL + ++AEW++++ L+ L T+ + +LPL+ +
Sbjct: 282 LWDKCLDVLSSLTHWEEVIAEWNTTLQTLTRVLARTVYNLDLDDLPLDRL 331
>SB_45941| Best HMM Match : DUF632 (HMM E-Value=2.8)
Length = 688
Score = 28.7 bits (61), Expect = 8.0
Identities = 15/50 (30%), Positives = 29/50 (58%)
Query: 180 LYDGVLDWEHSLPENDLLMAEWHSSIADLSICLGTTLQIVPSGNLPLETI 229
L+D LD SL + ++AEW++++ L+ L T+ + +LPL+ +
Sbjct: 326 LWDKCLDVLSSLTHWEEVIAEWNTTLQTLTRVLARTVYNLDLDDLPLDRL 375
>SB_13176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 505
Score = 28.7 bits (61), Expect = 8.0
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 282 MKFAETAIIDWSIDRKDVLALEKTFKSKCKGVKKKRILIKTKRFTSNANDIE 333
M+ ++T + ++D ++ +T KSKC KKRI K+ T N +
Sbjct: 154 MRSSQTRTLSTTLDDNEMTLKSETTKSKCSKECKKRINEKSNGKTVKENQFD 205
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.135 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,911,116
Number of Sequences: 59808
Number of extensions: 554420
Number of successful extensions: 1284
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1248
Number of HSP's gapped (non-prelim): 30
length of query: 370
length of database: 16,821,457
effective HSP length: 83
effective length of query: 287
effective length of database: 11,857,393
effective search space: 3403071791
effective search space used: 3403071791
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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