Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001400-TA|BGIBMGA001400-PA|undefined
(1080 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 26 1.2
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 25 2.1
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 25 2.1
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 25 2.1
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 25 2.8
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 25 3.7
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 25 3.7
DQ855493-1|ABH88180.1| 127|Tribolium castaneum chemosensory pro... 24 4.9
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 24 6.4
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 24 6.4
>DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired
protein.
Length = 311
Score = 26.2 bits (55), Expect = 1.2
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 857 EEKDDENSQESTTDLNQTDDSEEFE-DENNPTETSEEQESQDHSEYIFNS 905
E + +S DL+ T + +N+P + SEE++S++ Y +N+
Sbjct: 41 ENHPETELSDSDCDLDVTGTPPPLDCSKNSPEKESEEKKSKEKPPYSYNA 90
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 25.4 bits (53), Expect = 2.1
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 856 SEEKDD-ENSQESTTDLNQTDDSEEFED 882
S+E+DD ++ Q S+T+ ++ DD EE D
Sbjct: 180 SDEQDDGDDGQGSSTNNDEDDDDEETGD 207
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 25.4 bits (53), Expect = 2.1
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 856 SEEKDD-ENSQESTTDLNQTDDSEEFED 882
S+E+DD ++ Q S+T+ ++ DD EE D
Sbjct: 180 SDEQDDGDDGQGSSTNNDEDDDDEETGD 207
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 25.4 bits (53), Expect = 2.1
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 856 SEEKDD-ENSQESTTDLNQTDDSEEFED 882
S+E+DD ++ Q S+T+ ++ DD EE D
Sbjct: 180 SDEQDDGDDGQGSSTNNDEDDDDEETGD 207
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 25.0 bits (52), Expect = 2.8
Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 259 SDEDTYDEPSPRYKQQNHFSPQIYPQ 284
S++D+ +P P K + F PQ+ PQ
Sbjct: 252 SNDDSVSQP-PNRKPRTDFKPQVLPQ 276
Score = 23.4 bits (48), Expect = 8.5
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 6/61 (9%)
Query: 852 TSDYSEEKDDENSQESTTDLNQTDDSEEFEDENNPTETSEEQESQDHSEYIFNSTSNPNE 911
TSD ++E D E + D+ E E+ + + E E +D E F+S E
Sbjct: 853 TSDKAQEADGE-----VVVKKEVDEEERLENHTS-VKIKREAEDRDEDERSFHSNGAKEE 906
Query: 912 N 912
+
Sbjct: 907 D 907
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 24.6 bits (51), Expect = 3.7
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Query: 850 EATSDYSEEKDDENSQE--STTDLNQTDDSEEFEDENNPTETSEEQESQ 896
+ T SEE+D+E S S ++ Q + +E D NN E Q
Sbjct: 426 DPTQVESEEEDEETSTTVFSNVEVVQEEAKKEESDSNNNNNKEEGNSCQ 474
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 24.6 bits (51), Expect = 3.7
Identities = 12/37 (32%), Positives = 17/37 (45%)
Query: 854 DYSEEKDDENSQESTTDLNQTDDSEEFEDENNPTETS 890
++ EK D+ ES D + DD + NP TS
Sbjct: 273 NHKYEKIDKEEHESMDDDDDDDDDMSNSENQNPRFTS 309
>DQ855493-1|ABH88180.1| 127|Tribolium castaneum chemosensory
protein 7 protein.
Length = 127
Score = 24.2 bits (50), Expect = 4.9
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 147 KCNDEKCKEGVKAYWYVKRVRQRDDEAMSGKY 178
KCN ++ + K ++ + R RD E +S KY
Sbjct: 76 KCNQKQKETAEKVIRHLTQKRARDWERLSKKY 107
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 23.8 bits (49), Expect = 6.4
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 493 DYGENNTTTEKGVIKENNKSRRIVPNVRKSTKKQD 527
D G + T V+K N + P + KST K D
Sbjct: 97 DEGFDGTFQTNVVVKHNGSCLYVPPGIFKSTCKMD 131
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 23.8 bits (49), Expect = 6.4
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 520 RKSTKKQ-DKVKSLSTSTSSPDIITV 544
RK K Q +K K ST+ SPD+I V
Sbjct: 268 RKEKKAQKEKDKPNSTTNGSPDVIKV 293
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.308 0.125 0.355
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,029
Number of Sequences: 317
Number of extensions: 8415
Number of successful extensions: 47
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 40
Number of HSP's gapped (non-prelim): 13
length of query: 1080
length of database: 114,650
effective HSP length: 64
effective length of query: 1016
effective length of database: 94,362
effective search space: 95871792
effective search space used: 95871792
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 48 (23.4 bits)
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