Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001399-TA|BGIBMGA001399-PA|IPR000146|Inositol
phosphatase/fructose-1,6-bisphosphatase
         (336 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    22   5.5  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    22   5.5  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   7.3  

>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/19 (36%), Positives = 13/19 (68%)

Query: 297 GLATNGKVPILDIVPSSIH 315
           G+  NG  PIL+ + +++H
Sbjct: 366 GICGNGPYPILNAIKNTLH 384


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/19 (36%), Positives = 13/19 (68%)

Query: 297 GLATNGKVPILDIVPSSIH 315
           G+  NG  PIL+ + +++H
Sbjct: 366 GICGNGPYPILNAIKNTLH 384


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 2/40 (5%)

Query: 275 PNGKLRLLYECNPMSFIVTEAGGLATNGKVPILDIVPSSI 314
           PN  L   Y+  P+   +    G   N K+P+ DI P  +
Sbjct: 31  PNNFLPERYK--PIGVQIANRFGEQANEKIPLKDITPPDL 68


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.316    0.134    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,669
Number of Sequences: 317
Number of extensions: 3302
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 3
length of query: 336
length of database: 114,650
effective HSP length: 57
effective length of query: 279
effective length of database: 96,581
effective search space: 26946099
effective search space used: 26946099
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 43 (21.4 bits)