Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001399-TA|BGIBMGA001399-PA|IPR000146|Inositol
phosphatase/fructose-1,6-bisphosphatase
         (336 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    23   2.8  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   3.8  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   5.0  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   8.7  

>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 2/23 (8%)

Query: 122 PLDGSSNIECLVSVGSIFAIYKK 144
           PLD  SN+E +V V SI+  Y K
Sbjct: 31  PLD--SNVEVVVGVPSIYLTYAK 51


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 5/70 (7%)

Query: 63  SGDTNVQGEEVKKLDVLSNDLFINMLKSSFTTCLLVSEENQTVLQVETERRGKYVVCFDP 122
           S + N + EE   +D L NDLF    K     CL   E+ +    ++  +    ++  D 
Sbjct: 85  SKEVNDKKEENFIVDRLRNDLFECENKEKSNVCLKFEEQKRRKKSLDDVK----ILRNDR 140

Query: 123 LDG-SSNIEC 131
           +D   SN++C
Sbjct: 141 IDSYKSNLKC 150



 Score = 23.0 bits (47), Expect = 3.8
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 215 SINEGYAAEWDKGLQDYIEDKKRPKT 240
           S  +  ++EWD    D   +KK PK+
Sbjct: 191 SSGDDLSSEWDSDYTDKSNEKKIPKS 216


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)

Query: 70  GEEVKKLDVLSNDLFINMLK 89
           G+ +  + V SN +FIN+LK
Sbjct: 326 GKTLTSISVESNTMFINILK 345


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 11/30 (36%), Positives = 14/30 (46%)

Query: 7   AFDVNAMTLTRWVLAQQRTAPTATGDLTQL 36
           AFD+N   L + V      A T  G+L  L
Sbjct: 161 AFDLNTSQLLKQVEIPHDVATTGKGELVSL 190


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.316    0.134    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,162
Number of Sequences: 429
Number of extensions: 3569
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 6
length of query: 336
length of database: 140,377
effective HSP length: 58
effective length of query: 278
effective length of database: 115,495
effective search space: 32107610
effective search space used: 32107610
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 44 (21.8 bits)