GeneModel BLAST Result against nematostella

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001399-TA|BGIBMGA001399-PA|IPR000146|Inositol
phosphatase/fructose-1,6-bisphosphatase
         (336 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_16789| Best HMM Match : No HMM Matches (HMM E-Value=.)             445   e-125
SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.)                33   0.43 
SB_7301| Best HMM Match : S-antigen (HMM E-Value=2.1)                  32   0.57 
SB_8941| Best HMM Match : VWA (HMM E-Value=0)                          30   3.1  
SB_38403| Best HMM Match : PP2C (HMM E-Value=8.5e-35)                  29   5.3  
SB_24368| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   7.1  
SB_50345| Best HMM Match : Cadherin (HMM E-Value=0)                    28   9.3  
SB_10746| Best HMM Match : Cadherin (HMM E-Value=0)                    28   9.3  

>SB_16789| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 457

 Score =  445 bits (1097), Expect = e-125
 Identities = 209/330 (63%), Positives = 270/330 (81%), Gaps = 4/330 (1%)

Query: 9   DVNAMTLTRWVLAQQRTAPTATGDLTQLLNSIQTAVKAIQSAVRKAGIAKLHGISGDTNV 68
           D N MTLTR+VL++QR  P ATGDLTQLL++I TAVKA  SAVRKAGIA+L GI+GDTN+
Sbjct: 3   DTNCMTLTRFVLSEQRKIPGATGDLTQLLSAIMTAVKATSSAVRKAGIARLFGIAGDTNI 62

Query: 69  QGEEVKKLDVLSNDLFINMLKSSFTTCLLVSEENQTVLQVETERRGKYVVCFDPLDGSSN 128
            G++ +KLDVL+N+LFINML+SS+TTCLLVSEEN+TV++VE E++GKYVV FDPLDGSSN
Sbjct: 63  SGDQQQKLDVLANELFINMLRSSYTTCLLVSEENETVIEVEIEKQGKYVVWFDPLDGSSN 122

Query: 129 IECLVSVGSIFAIYKKKSEGDPVESDALKPGRELVAAGYALYGSATMMVLSLGKGKGVNG 188
           I+CL S+GSIF I +K S+  P + D ++PGR +VAAGYALYGSAT++VLS   G GVN 
Sbjct: 123 IDCLASIGSIFGIARKISDDSPGQQDGIQPGRNMVAAGYALYGSATVIVLS--TGNGVNE 180

Query: 189 FMYDPSIGEFILTDPNMKIPEKGK-IYSINEGYAAEWDKGLQDYIEDKKRPKTGKA-YGA 246
           F  DPSIGEF+LT PN+++  +GK IYS+NEG A  + + ++ Y+E  K PK GK  Y A
Sbjct: 181 FTLDPSIGEFVLTKPNIRMKPRGKAIYSVNEGNACYFFEPMKKYMEKLKTPKDGKGPYAA 240

Query: 247 RYVGSMVADVHRTIKYGGIFMYPATKSAPNGKLRLLYECNPMSFIVTEAGGLATNGKVPI 306
           RYVGSMV+D+HRT+ YGGIFMYP +  AP GKLRLLYECNPM++++ +AGG+A++G  PI
Sbjct: 241 RYVGSMVSDLHRTLIYGGIFMYPGSTKAPEGKLRLLYECNPMAYVIEQAGGMASDGNQPI 300

Query: 307 LDIVPSSIHQRVPCYLGSKKDVEELLNYLK 336
           LDIVP+S+HQR P ++GS  DV++ LN++K
Sbjct: 301 LDIVPTSLHQRAPIFIGSADDVKDYLNHVK 330


>SB_510| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1907

 Score = 32.7 bits (71), Expect = 0.43
 Identities = 45/171 (26%), Positives = 64/171 (37%), Gaps = 13/171 (7%)

Query: 109 ETERRGKYVVCFDPLDGSSNIECLVSVGSIFAIYKKKSEGDPV-ESDALKPGRELVAAGY 167
           ETE  GK VV   P       E + +     A+     E  P  E D  KPG+ LV    
Sbjct: 45  ETEPDGKKVVKQQPPPRKLQTEKIYAFTETTAV-----EAQPTFEEDRPKPGK-LVGKWQ 98

Query: 168 ALYGSATMMVLSLGKGKGVNGFMYDPSIGEFILTDPNMKIPEKGKIYSINEGYAAEWDKG 227
               +    ++  GK   +     +P   E +   P  +  +  KIY+ NE  A E    
Sbjct: 99  PEESTVERAIIKPGKLTNIEFGETEPDGKEVVKQQPPPRKLQTEKIYAFNENTAVE---S 155

Query: 228 LQDYIEDKKRPKTGKAYGARYVGSMVADVHRTIKYGGIFMYPATKSAPNGK 278
              + ED  RPK GK  G         +    IK G +      ++ P+GK
Sbjct: 156 QPTFEED--RPKPGKLVGKWQPEESTVE-RAIIKPGKLTNIEFGETEPDGK 203


>SB_7301| Best HMM Match : S-antigen (HMM E-Value=2.1)
          Length = 682

 Score = 32.3 bits (70), Expect = 0.57
 Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 2/87 (2%)

Query: 68  VQGEEVKKLDVLS-NDLFINMLKSSFTTCLLVSEENQTVLQVETERRGKYVVCFDPLDGS 126
           V+ E+V ++++L  ND  I    S  TTC   S++N +V+       G  VV   P D  
Sbjct: 475 VKVEKVGEVEILEKNDKAILSGNSKTTTCN-ASDKNSSVITFTPSDEGSKVVPSVPSDSD 533

Query: 127 SNIECLVSVGSIFAIYKKKSEGDPVES 153
           SN++   +V S     + K+     ES
Sbjct: 534 SNVQSSKTVVSTVLEVESKNVSSTEES 560


>SB_8941| Best HMM Match : VWA (HMM E-Value=0)
          Length = 2180

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 3/54 (5%)

Query: 7    AFDVNAMTLTRWVLAQQRTAPTATGDLTQLLNSIQTAVKAIQSAVRKAGIAKLH 60
            A D+  + LTR     +R  P A   +     +IQTAVKA++S+VR    A +H
Sbjct: 1859 ALDMGNLPLTR---RTRRLIPKAIICIMDASKAIQTAVKALRSSVRPLHDAGVH 1909


>SB_38403| Best HMM Match : PP2C (HMM E-Value=8.5e-35)
          Length = 916

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)

Query: 40  IQTAVKAIQSAVRKAGIAKLHGISGDTNVQGEEVKKLDVLSND 82
           I T +K  +S V + G+ +L  I+GD +  G+E  + D+L+ D
Sbjct: 74  IDTFLKVDESIVSEEGLKELKEIAGDNDDSGDE-NEADLLTKD 115


>SB_24368| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1045

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 1/69 (1%)

Query: 96  LLVSEENQTVLQVETERRGKYVVCFDPLDGSSNIECLVSVGSIFAIYKKKSEGDPVESDA 155
           LLVS+    +    T   G Y VC + ++G + IEC  S  +I+     K      E D 
Sbjct: 596 LLVSQALSRMDYTATNTSGNYTVCENLMNG-AKIECARSANNIYNYCTSKFLPTGKEGDV 654

Query: 156 LKPGRELVA 164
            +   EL++
Sbjct: 655 RQKCEELLS 663


>SB_50345| Best HMM Match : Cadherin (HMM E-Value=0)
          Length = 1021

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 6/54 (11%)

Query: 4   QGPA---FDVNAMT---LTRWVLAQQRTAPTATGDLTQLLNSIQTAVKAIQSAV 51
           QGPA   F++NA T    T+ +L +++  P+A GD+ Q+   + T    + + +
Sbjct: 58  QGPADGIFEINAATGVLRTKILLNREKLPPSAQGDIFQIQIKVTTDTGGVSATI 111


>SB_10746| Best HMM Match : Cadherin (HMM E-Value=0)
          Length = 336

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 6/54 (11%)

Query: 4   QGPA---FDVNAMT---LTRWVLAQQRTAPTATGDLTQLLNSIQTAVKAIQSAV 51
           QGPA   F++NA T    T+ +L +++  P+A GD+ Q+   + T    + + +
Sbjct: 58  QGPADGIFEINAATGVLRTKILLNREKLPPSAQGDIFQIQIKVTTDTGGVSATI 111


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.316    0.134    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,157,470
Number of Sequences: 59808
Number of extensions: 455695
Number of successful extensions: 937
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 932
Number of HSP's gapped (non-prelim): 8
length of query: 336
length of database: 16,821,457
effective HSP length: 83
effective length of query: 253
effective length of database: 11,857,393
effective search space: 2999920429
effective search space used: 2999920429
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 60 (28.3 bits)