GeneModel BLAST Result against celegans

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001399-TA|BGIBMGA001399-PA|IPR000146|Inositol
phosphatase/fructose-1,6-bisphosphatase
         (336 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271466-1|CAB69047.1|  341|Caenorhabditis elegans fructose-1,6-...   462   e-130
AC006670-1|AAF39910.1|  341|Caenorhabditis elegans Fructose-1,6-...   462   e-130
Z68106-8|CAA92125.2|  558|Caenorhabditis elegans Hypothetical pr...    31   1.2  
Z49153-3|CAD30426.1|  558|Caenorhabditis elegans Hypothetical pr...    31   1.2  
Z80214-1|CAB02262.1|  500|Caenorhabditis elegans Hypothetical pr...    29   3.5  

>AJ271466-1|CAB69047.1|  341|Caenorhabditis elegans
           fructose-1,6-bisphosphatase protein.
          Length = 341

 Score =  462 bits (1139), Expect = e-130
 Identities = 223/328 (67%), Positives = 263/328 (80%), Gaps = 3/328 (0%)

Query: 9   DVNAMTLTRWVLAQQRTAPTATGDLTQLLNSIQTAVKAIQSAVRKAGIAKLHGISGDTNV 68
           + +++TL R+VL +QR    A+G+LT LL ++  A+KAI SA +KAG+AKL+GI+G TNV
Sbjct: 11  ETDSITLQRYVLQEQRKHADASGELTALLTNMLVAIKAIASATQKAGLAKLYGIAGATNV 70

Query: 69  QGEEVKKLDVLSNDLFINMLKSSFTTCLLVSEENQTVLQVETERRGKYVVCFDPLDGSSN 128
           QGEEVKKLDVLSN+L INMLKSS+TTCLLVSEEN  +++VE +RRGKY+V FDPLDGSSN
Sbjct: 71  QGEEVKKLDVLSNELMINMLKSSYTTCLLVSEENDELIEVEEQRRGKYIVTFDPLDGSSN 130

Query: 129 IECLVSVGSIFAIYKKKSEGDPVESDALKPGRELVAAGYALYGSATMMVLSLGKGKGVNG 188
           I+CLVS+G+IF IYKK+ +G     D LKPG+E+VAAGYALYGSATM+VLS   G GVNG
Sbjct: 131 IDCLVSIGTIFGIYKKRGDGPATVDDVLKPGKEMVAAGYALYGSATMVVLS--TGDGVNG 188

Query: 189 FMYDPSIGEFILTDPNMKIPEKGKIYSINEGYAAEWDKGLQDYIEDKKRPKTG-KAYGAR 247
           F  DPSIGEFILT PNMK  EKG IYS+NEGYA  W KG  +YI  +K P+ G KA G R
Sbjct: 189 FTLDPSIGEFILTHPNMKCKEKGSIYSLNEGYAQTWSKGFAEYIRTRKYPEAGKKAMGQR 248

Query: 248 YVGSMVADVHRTIKYGGIFMYPATKSAPNGKLRLLYECNPMSFIVTEAGGLATNGKVPIL 307
           YVGSMVADVHRTI  GGIF+YP T SAPNGKLRLLYECNPM++I+ +AGGLAT GK  IL
Sbjct: 249 YVGSMVADVHRTILNGGIFLYPPTVSAPNGKLRLLYECNPMAYIIEQAGGLATTGKERIL 308

Query: 308 DIVPSSIHQRVPCYLGSKKDVEELLNYL 335
           DI P+ IHQR P  LGSK DVEE L YL
Sbjct: 309 DIQPTQIHQRAPIILGSKLDVEEALEYL 336


>AC006670-1|AAF39910.1|  341|Caenorhabditis elegans
           Fructose-1,6-biphosphatase protein1 protein.
          Length = 341

 Score =  462 bits (1139), Expect = e-130
 Identities = 223/328 (67%), Positives = 263/328 (80%), Gaps = 3/328 (0%)

Query: 9   DVNAMTLTRWVLAQQRTAPTATGDLTQLLNSIQTAVKAIQSAVRKAGIAKLHGISGDTNV 68
           + +++TL R+VL +QR    A+G+LT LL ++  A+KAI SA +KAG+AKL+GI+G TNV
Sbjct: 11  ETDSITLQRYVLQEQRKHADASGELTALLTNMLVAIKAIASATQKAGLAKLYGIAGATNV 70

Query: 69  QGEEVKKLDVLSNDLFINMLKSSFTTCLLVSEENQTVLQVETERRGKYVVCFDPLDGSSN 128
           QGEEVKKLDVLSN+L INMLKSS+TTCLLVSEEN  +++VE +RRGKY+V FDPLDGSSN
Sbjct: 71  QGEEVKKLDVLSNELMINMLKSSYTTCLLVSEENDELIEVEEQRRGKYIVTFDPLDGSSN 130

Query: 129 IECLVSVGSIFAIYKKKSEGDPVESDALKPGRELVAAGYALYGSATMMVLSLGKGKGVNG 188
           I+CLVS+G+IF IYKK+ +G     D LKPG+E+VAAGYALYGSATM+VLS   G GVNG
Sbjct: 131 IDCLVSIGTIFGIYKKRGDGPATVDDVLKPGKEMVAAGYALYGSATMVVLS--TGDGVNG 188

Query: 189 FMYDPSIGEFILTDPNMKIPEKGKIYSINEGYAAEWDKGLQDYIEDKKRPKTG-KAYGAR 247
           F  DPSIGEFILT PNMK  EKG IYS+NEGYA  W KG  +YI  +K P+ G KA G R
Sbjct: 189 FTLDPSIGEFILTHPNMKCKEKGSIYSLNEGYAQTWSKGFAEYIRTRKYPEAGKKAMGQR 248

Query: 248 YVGSMVADVHRTIKYGGIFMYPATKSAPNGKLRLLYECNPMSFIVTEAGGLATNGKVPIL 307
           YVGSMVADVHRTI  GGIF+YP T SAPNGKLRLLYECNPM++I+ +AGGLAT GK  IL
Sbjct: 249 YVGSMVADVHRTILNGGIFLYPPTVSAPNGKLRLLYECNPMAYIIEQAGGLATTGKERIL 308

Query: 308 DIVPSSIHQRVPCYLGSKKDVEELLNYL 335
           DI P+ IHQR P  LGSK DVEE L YL
Sbjct: 309 DIQPTQIHQRAPIILGSKLDVEEALEYL 336


>Z68106-8|CAA92125.2|  558|Caenorhabditis elegans Hypothetical
           protein F41E7.2 protein.
          Length = 558

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 2/70 (2%)

Query: 150 PVESDALKPGRELVAAGYALYGSATMMVLSLGKGKGVNGFMYDPSIGEFILTDPNMK-IP 208
           PV S++L          +++     M+VL++  GK V  F+Y PS+   +L    M+ +P
Sbjct: 53  PVTSNSLNLQNAANEVLHSIISCFMMVVLAVAAGKLVK-FIYTPSLIGCMLVGIAMRNVP 111

Query: 209 EKGKIYSINE 218
           + G+++ INE
Sbjct: 112 QFGELFYINE 121


>Z49153-3|CAD30426.1|  558|Caenorhabditis elegans Hypothetical
           protein F41E7.2 protein.
          Length = 558

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 2/70 (2%)

Query: 150 PVESDALKPGRELVAAGYALYGSATMMVLSLGKGKGVNGFMYDPSIGEFILTDPNMK-IP 208
           PV S++L          +++     M+VL++  GK V  F+Y PS+   +L    M+ +P
Sbjct: 53  PVTSNSLNLQNAANEVLHSIISCFMMVVLAVAAGKLVK-FIYTPSLIGCMLVGIAMRNVP 111

Query: 209 EKGKIYSINE 218
           + G+++ INE
Sbjct: 112 QFGELFYINE 121


>Z80214-1|CAB02262.1|  500|Caenorhabditis elegans Hypothetical
           protein C27D8.2 protein.
          Length = 500

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 17/61 (27%), Positives = 27/61 (44%)

Query: 40  IQTAVKAIQSAVRKAGIAKLHGISGDTNVQGEEVKKLDVLSNDLFINMLKSSFTTCLLVS 99
           ++T  K+  S  +K G+ KL     D NV  ++ KK D       + +L +     L V 
Sbjct: 1   METDKKSSDSKKKKVGLPKLKSSESDNNVISKKAKKKDATGGGKVVRLLGNRTVYHLPVE 60

Query: 100 E 100
           E
Sbjct: 61  E 61


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.316    0.134    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,230,668
Number of Sequences: 27539
Number of extensions: 345182
Number of successful extensions: 755
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 748
Number of HSP's gapped (non-prelim): 5
length of query: 336
length of database: 12,573,161
effective HSP length: 82
effective length of query: 254
effective length of database: 10,314,963
effective search space: 2620000602
effective search space used: 2620000602
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 60 (28.3 bits)