Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001398-TA|BGIBMGA001398-PA|IPR008477|Protein of unknown
function DUF758
(435 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence orphan|Sc... 31 0.42
SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizo... 29 1.3
SPAC17G6.17 |pof8||F-box protein Pof8|Schizosaccharomyces pombe|... 29 1.7
SPBC1711.13 |his2||histidinol dehydrogenase His2 |Schizosaccharo... 28 2.9
SPCC1322.12c |bub1||serine/threonine protein kinase Bub1|Schizos... 28 2.9
SPBC18H10.02 |lcf1||long-chain-fatty-acid-CoA ligase Lcf1 |Schiz... 28 2.9
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 27 5.1
SPBC12C2.07c |||spermidine synthase |Schizosaccharomyces pombe|c... 27 6.8
SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 26 9.0
>SPAC1556.06.1 |meu1|SPAC1556.06a, SPAC1556.06|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 776
Score = 30.7 bits (66), Expect = 0.42
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 40 DATKLLKDILVIQKEIQTIKESYVTEDKLNE-IKNELYNLKSASLVNNNFDIHNTEGHI 97
+ T LL+++ ++ + KE +V +KLN+ IK+E NLK + NN+ T G +
Sbjct: 383 ERTHLLRELEELRHLATSAKEDFVKVEKLNKIIKDENENLKE-YIRNNSLSFQATAGEL 440
>SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1513
Score = 29.1 bits (62), Expect = 1.3
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 26 RDLQKLPPVH--FDHLDATKLLKDILVIQKEIQTIKESYVTEDKLNEIKNELYNL 78
R K PP+ DH + T LKD V+ K +QT + T ++ +K + ++L
Sbjct: 775 RKKDKKPPLFKAHDHWNNTSNLKDSAVLFKVLQTSRSMAFTCQEIENMKQKAFDL 829
>SPAC17G6.17 |pof8||F-box protein Pof8|Schizosaccharomyces pombe|chr
1|||Manual
Length = 402
Score = 28.7 bits (61), Expect = 1.7
Identities = 17/71 (23%), Positives = 32/71 (45%)
Query: 43 KLLKDILVIQKEIQTIKESYVTEDKLNEIKNELYNLKSASLVNNNFDIHNTEGHINTKRG 102
KL K + K + ++ ED L+ KN L +K+ + N IH+ ++ +++
Sbjct: 262 KLTKVEKQMTKSVSKTSQTDKDEDNLDFTKNLLTRIKNLHPLTNKSTIHSLLSYVFSRQT 321
Query: 103 GGILTNSYYLD 113
I Y+D
Sbjct: 322 QNIACEPMYID 332
>SPBC1711.13 |his2||histidinol dehydrogenase His2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/59 (23%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 376 QSLKSVVERHLSDKSVSRLAGVFALASRGE---LLDSLFSGQVDEDVLKLSRMLRKELD 431
Q ++++V+ + D A + AS+ E L ++ D+D++K+S M+++++D
Sbjct: 33 QKIRTIVQPIIEDVKSRGEASLIDYASKFEKVQLKSAVLKAPFDDDLMKISPMIKEDID 91
>SPCC1322.12c |bub1||serine/threonine protein kinase
Bub1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1044
Score = 27.9 bits (59), Expect = 2.9
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 45 LKDILVIQKEIQTIKESYVTEDKLNEIKNELYNLKSASL 83
L D+ + ++ IK+SY T D+L + + Y L S +
Sbjct: 89 LNDVRHLLIQLAKIKQSYETPDELQQAAKQFYQLASKGI 127
>SPBC18H10.02 |lcf1||long-chain-fatty-acid-CoA ligase Lcf1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 676
Score = 27.9 bits (59), Expect = 2.9
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 174 PAQTVDPAAERGSCMQYSHKAASTPEPNGVGSTNKLLAKVVTAEGEWKAEEPNEQWILA 232
P + P+ E C+ Y+ + ST P GV ++K + +VTA + E ++ ++LA
Sbjct: 230 PVEPDPPSPEEICCIMYT--SGSTGLPKGVILSHKNMVAIVTAIVKHVPEVTSKDYLLA 286
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 27.1 bits (57), Expect = 5.1
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 32 PPVHFDHLDATKLLKDILVIQKEIQTIKESYVTEDKLNEIKNELYNLKSASL--VNNNFD 89
P H D L+A L++ L + E T+ + T+D LNE+ ++ +L L + N+D
Sbjct: 447 PTNHLD-LEAVAWLEEYLTHEMEGHTLLITCHTQDTLNEVCTDIIHLYHQKLDYYSGNYD 505
>SPBC12C2.07c |||spermidine synthase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 298
Score = 26.6 bits (56), Expect = 6.8
Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Query: 359 EFSYDRGFLQDALRDSHQSLKSVVERHLSDKSVSRLAGVFALASRGELLDSLFSGQVDED 418
EFSY AL +SH + K V+ D GV + E ++ +DED
Sbjct: 71 EFSYQEMIAHLAL-NSHPNPKKVLVIGGGD------GGVLREVVKHECVEEAILCDIDED 123
Query: 419 VLKLSRMLRKELDRG 433
V+K+S+ E+ G
Sbjct: 124 VIKVSKQYLPEMSAG 138
>SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 589
Score = 26.2 bits (55), Expect = 9.0
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Query: 21 PTFVARDLQKLPPVHFDHLDATKLLKDILVIQK-EIQTIKESYVTEDKLNEIKNELYNLK 79
PT A +++ +P HF+ + V++K E+ S V E +E N ++
Sbjct: 239 PTSTALEVRNIPEEHFNEENIRSFFSKFGVLEKVELNPTHHSCVLEFTSHEAANNAWS-S 297
Query: 80 SASLVNNNF 88
+ NN F
Sbjct: 298 PEPIFNNRF 306
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.132 0.372
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,853,134
Number of Sequences: 5004
Number of extensions: 73944
Number of successful extensions: 252
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 248
Number of HSP's gapped (non-prelim): 9
length of query: 435
length of database: 2,362,478
effective HSP length: 75
effective length of query: 360
effective length of database: 1,987,178
effective search space: 715384080
effective search space used: 715384080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 55 (26.2 bits)
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